Basic Information

Insect: Vespa mandarinia
Gene Symbol: salm
Assembly: GCA_014083535.1
Location: JACHAV010000017.1:3293781-3304301[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.4e-06 0.00025 20.8 0.9 1 23 385 407 385 407 0.98

2 9 6.8e-06 0.00049 19.9 2.1 1 23 413 435 413 435 0.98

3 9 0.043 3.1 8.0 3.8 2 23 800 821 799 821 0.98

4 9 2.9e-08 2.1e-06 27.3 0.6 1 23 827 849 827 849 0.97

5 9 4.1e-05 0.003 17.4 2.6 1 23 859 881 859 881 0.98

6 9 0.0014 0.1 12.6 1.9 2 23 1200 1221 1199 1221 0.97

7 9 1.9e-07 1.3e-05 24.8 1.3 1 23 1227 1249 1227 1249 0.99

8 9 4e-07 2.9e-05 23.8 2.1 3 23 1335 1355 1333 1355 0.96

9 9 1.4e-07 9.8e-06 25.3 0.9 1 23 1361 1383 1361 1383 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.4e-06	0.00025	20.8	0.9	1	23	385	407	385	407	0.98
2	9	6.8e-06	0.00049	19.9	2.1	1	23	413	435	413	435	0.98
3	9	0.043	3.1	8.0	3.8	2	23	800	821	799	821	0.98
4	9	2.9e-08	2.1e-06	27.3	0.6	1	23	827	849	827	849	0.97
5	9	4.1e-05	0.003	17.4	2.6	1	23	859	881	859	881	0.98
6	9	0.0014	0.1	12.6	1.9	2	23	1200	1221	1199	1221	0.97
7	9	1.9e-07	1.3e-05	24.8	1.3	1	23	1227	1249	1227	1249	0.99
8	9	4e-07	2.9e-05	23.8	2.1	3	23	1335	1355	1333	1355	0.96
9	9	1.4e-07	9.8e-06	25.3	0.9	1	23	1361	1383	1361	1383	0.98

Sequence Information

Coding Sequence: ATGCAGCTCATGCGATGGAGCATAACGCGTCGCCTGGAGTGTCGAGGCATTAGGCAATCTCAGGAGAAAAGCTGCCAACCAACGACAAGGATTTATTCCAGCCGATCCTCCGGAGAGGAAAATGATTTCATATCGGACGGCGAGGAGAGTGGCGGCGGTGGAGGAGGAGACGAAGCGGTTGATCTTACAGCGGCTCGAACTCATCACGGAGATGAGGATGAAAAGGATCAAGAGGATCCTTTGGAGGAAGATGAGGAAGGCGTCGACGAGCAAGACGAACaggacgaggacgaagaaGGCTCGCGAAAGCAAATGCACCATCGGCAGGACGCGGAAAACAATAACAACTTCGTTGAGGGTGGAGCGAGTAGCGGGATCTTTCCACCGGCTGGTACTAGTCACGTCACACTCGAAGCCCTTCAAAATACGAAAGTGGCCGTCGCTCAATTTGCGGCCACTGCACTCGCCGGTGGTGCGGACAGTGAGGCAGCTCTACAGGACTTGGCCCTTTTGCAAAGTACGCTATACACGCTTCAACATCAGCAGGTTTTTCAATTGCAGCTGATAAGTCAGCTGCAACAACAATTATCTATTACTCATGgccaatctgtgccacaatcGTCGACGGCTGAGCCACCCAATAGCAAGGAAGCTTCGCCGTCTCCTGTCCTGCATCCGAAGGCATTGTCTACATTGACCTCGCCACCTTCCTGTCGATCACCTAGCAGTAGTCATCGTCAACAAAGCTCGCCGGCGCCGGCAACGCCTAATCTACCCCAAGAACGGCCTACGCCTAGCAGCAGTGCTTCTCCTCTGAATCTGCCGCTGCCAGCTACGCCGAACGTCTCCTCGAGCATACCAACGACGAGTAACAATAGCAATCTAGCGTTGTCTCATCAGATGCCGCCGCTATGCTCGATAAGCTCGTCCTTGGCGTCCTCGATAATAACCAATACGGATCCACCGCCGCTTCACGAACCCAACACCTTGGAAATGCTACAGAAACGAGCGCAAGAGGTGCTGGACAATGCCAGTCAAGGACTATTGGCTAATAACCTCGCGGACGAGCTCGCCTTCAGGGGTGGCAAAGGTTCTCGGCTCTCGCCTTACGACTCGAAATCAGGTGGCAGCCGGGGAGAACATTTCTTCAAGCACCGATGTCGTTACTGCGGCAAGGTTTTCGGCAGCGACTCGGCCCTACAGATCCACATACGATCCCATACAGGTGAGCGACCCTTTAAATGCAACGTCTGCGGCAGCCGATTCACCACGAAGGGAAACCTGAAGGTCCACTTCCAGAGACACACGGCTAAATTTCCGCACGTTAAAATGAACCCAAATCCCGTCCCCGAGCATCTCGACAAGTATCATCCGCCTCTCCTTCAGCAGATAGCCTCGGGTCAGAGGCCAATGCCGTCTCCGCCACCTCCGCCCCCTTCGCATCATCCCTCGTTTCATCCAGCGGCTACGGCCCACGGATTTCTTCCTCCTCAACCACCTCTGCCACTCAGTCTCGCCTTACCCGGAATGCCACCCCTTTACCGGTCTCCCATTATTAATCATCGCGACGACCAAGAGTTACCGGAAAACTTGAGTAAACCCGTAACCACGGTACCGACGGCCACCTCGCCCCTCTCCCCAGCTGCTCTCTCCAACTCCCACCATTCCTCTTTCCACGATAATcatcaacaacagcagcaaaaGCAACAGCTCGAGCAAGAGGAAATCAAAATGGAACAGCGTTCGCCTCTTCAGGAACAATATCAGCAACGACCGACTAGTAGGGACGGTACTGATAGAATAACGCCGAAGAAAGAACCTGAGGATACCGAGGAACCAGTGGAAGAGGAGACCGAAGATTTTGAAGAAACAAGGCGATATCTCGCTTCGCCGCCTTCTTCGGCTAACCCCCCCTCGCAACCTCAAACCTATGAGGACTGTAGTATGGATAGTAAGATAAGTGGCAGATTGGAGGCCGATGGTGATATGGAGGTGGACGAGGAGACCGAGGAACAACCGGAAAATCTTTCTAGTCGAGGTACGGCCGGTCGTTTGCCTCAACAAATCGTCGCCTATCCCGGAGCATCGCCGGCTAGTAGCAGTGCAAGCAGCGGAAGCGTTCAAACGTCTTTCGCCGGGATTTTATTCCCTGGGCCACCTGGTCATCATCAAATACCACATCACACTGTCGCGAACGCGAGCGTGACGCCAACCGTGTCGGCGGCCGAGATGATCGTCGACCCTGCCAAGGATCCGGCGATATATTCCAGTCTCCTTCCAAGACCCGGAAGCAACGACAATTCTTGGGAGAGTCTGATCGAAATAACGAAAACGTCGGAAACATCGAAATTACAACAATTGGTCGATAATATCGAACACAAATTGACCGATCCAAATCAATGCGTTATTTGTCACAGAGTACTCTCTTGCAAGAGCGCCCTGCAAATGCATTATAGAACGCATACAGGAGAACGTCCGTTCAAGTGTAAAATCTGCGGGCGAGCTTTTACCACGAAGGGCAACCTCAAAACCCACATGGGTGTACACCGTGCGAAGCCACAGCTTCGAGTGTTTCATCAATGTCCCGTTTGTCATAAGAAGTTCACGAACGCTCTCGTGCTACAGCAGCACATACGTCTGCACACGGGTGAGCCTACCGATCTCAGTTTGGAACAGATACAGGCAGACGAAGTGAACGAATTTCCCCCTGGCTATTCGCATCATCCATTAGCCTCTTTCCTACCTCAAGGATTTCCACCGATACATCCGACGAGCGCGGGTTTCTCCCTAGGATTTCCACCCTCCCGACAGCCTACCATAGAACGACAACACCAGAAAAACGACGTAGACGTTAAGGAAGAACCccaacagcaacagcatcaacaacaacagcaacagcaacatcaattacatcatcatcatcaacagcaacagcagcaacaacagcagcagagATACATGGAAGAACACAACGAGGAAGTGGAAGAGcaagaagacgaagaggaagatCGCAGGGAGGATGACGAAAGGTGCGAGGTCAATCGCGATAGGTGTATCCCGGACACCGAGGAGGAACAGGATCACGAGAACGAGGAAagcgaacaaaaagaaatctctctatctaccttCTCGACCTCTTTGGCTGCTTTGGAGAATCAAGTGCGAACGATCACGACTACGGCGACCGGCACGGCCTCGATCGTCGCGAGATCACCTTCCTATCATCGTTACAACGGCAGCGACAAGAGCAATAGTCCTCCCACCGGTGGGGCACCCCTCGATCTCACCCCTCGAGCCTCATCGACGCCAGCCTCGGTATCATCCGCAGCGACGCCGCCACCCCAGACGACACCCCATCACGCGCATCCTTTCGGAATGTTCGCAGGCCTCTTGCAGACGGTCTCCTCCTCGCCTTCCACCAGCACCATGGGATCCTCCTCCAGCATAAACAGTGTCACTTCGATGAATACCGTCGCTCCTGGCAGCGGTGCCAGCGGTCCACTAGCCTCCCTCACTACATCGGCAGTCCTTGCTGCCACATCGACCTACAATCCGCTCGGCCTAGCTGTCGGAGGGCCAGCAGTACGTGGAAACACTACGTGTAATATCTGCTACAAGACATTTGCGTGCAACTCTGCTCTGGAGATTCATTATCGAAGTCACACGAAGGAGCGGCCTTTTAAATGCAGCATATGCGACCGAGGATTTTCGACGAAGGGCAATATGAAACAGCACATGCTGACACACAAAATACGCGATATGCCACCCCATCTCTTCACCGATGCGAAACAACAACACCAACAACAAAGCCAGGATCACGAGAGTTCTAGGAGTCCTATGTGCAGCGACGATTTGAGTttaccacctccacctccacctccaccaccaccaccgccggtACCACCGGCGTCAATCGAGTCGGCAGTACCAATGAAGAGATCTCCACCCGAGGGTGATCTTCCGGCACCAAAAAGACCACCCAGCGTGCCGagtaaacacttgtgccagaTTTGCAATAAGAATTTCTCATCATCTTCGGCGCTCCAGATCCATATGAGAACTCATACTGGCGACAAACCATTCCGATGCACCGTCTGCCAGAAGGCCTTCACCACCAAGGGTAATTTAAAGGTACATATGGGAACCCATATGTGGACCAACGGAGCCTCGCGGCGAGGACGACGCATGTCGTTGGATCTGCCACCTCTGCCCATCACTCCCAAGGACTCGGAGTTCCTCCAGCGACGGCCGGATCTCTTCTATCCTTATCTACCCGCGCCATTCCTTAACGGAGTACAGCAAAAGCTGAACGAGATATCGGTGATCCAAAGTAACAACGGTTTGCCGGCACACTCGGTAGGCGCGGCAAAGTACGCAGGACTATTTGGTTCCGTGTACAGTGGAAACGGAGGAGGCTTCCCTGGGGACAAACAACCGATGGCGCCAACCAGCAACGGGCCCTTGGTCGACGGCAAACCAGCGATACCAACAGGCTCGATGCTTTTCCAAACGCCATCGCCGTCTCATTCGCCGGGTACACCTTCCTCTAACAGCGGAAATCAAAATTCGGCTAGTGTTCCGTCGTGGACGACGAGCACCGGCGACCCTCTTCAACATCATTTCGACAGAGAGCCACCAAGTAGAACAGAGAACGCAGCTACACCACCTACGGCGAGATTACCGCCACCTTCGGCCCCAAGAGGTGAAGGGCTCGCCGCGTGA
Protein Sequence: MQLMRWSITRRLECRGIRQSQEKSCQPTTRIYSSRSSGEENDFISDGEESGGGGGGDEAVDLTAARTHHGDEDEKDQEDPLEEDEEGVDEQDEQDEDEEGSRKQMHHRQDAENNNNFVEGGASSGIFPPAGTSHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHGQSVPQSSTAEPPNSKEASPSPVLHPKALSTLTSPPSCRSPSSSHRQQSSPAPATPNLPQERPTPSSSASPLNLPLPATPNVSSSIPTTSNNSNLALSHQMPPLCSISSSLASSIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGGKGSRLSPYDSKSGGSRGEHFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASGQRPMPSPPPPPPSHHPSFHPAATAHGFLPPQPPLPLSLALPGMPPLYRSPIINHRDDQELPENLSKPVTTVPTATSPLSPAALSNSHHSSFHDNHQQQQQKQQLEQEEIKMEQRSPLQEQYQQRPTSRDGTDRITPKKEPEDTEEPVEEETEDFEETRRYLASPPSSANPPSQPQTYEDCSMDSKISGRLEADGDMEVDEETEEQPENLSSRGTAGRLPQQIVAYPGASPASSSASSGSVQTSFAGILFPGPPGHHQIPHHTVANASVTPTVSAAEMIVDPAKDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPQLRVFHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSLEQIQADEVNEFPPGYSHHPLASFLPQGFPPIHPTSAGFSLGFPPSRQPTIERQHQKNDVDVKEEPQQQQHQQQQQQQHQLHHHHQQQQQQQQQQRYMEEHNEEVEEQEDEEEDRREDDERCEVNRDRCIPDTEEEQDHENEESEQKEISLSTFSTSLAALENQVRTITTTATGTASIVARSPSYHRYNGSDKSNSPPTGGAPLDLTPRASSTPASVSSAATPPPQTTPHHAHPFGMFAGLLQTVSSSPSTSTMGSSSSINSVTSMNTVAPGSGASGPLASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCSICDRGFSTKGNMKQHMLTHKIRDMPPHLFTDAKQQHQQQSQDHESSRSPMCSDDLSLPPPPPPPPPPPPVPPASIESAVPMKRSPPEGDLPAPKRPPSVPSKHLCQICNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLPAHSVGAAKYAGLFGSVYSGNGGGFPGDKQPMAPTSNGPLVDGKPAIPTGSMLFQTPSPSHSPGTPSSNSGNQNSASVPSWTTSTGDPLQHHFDREPPSRTENAATPPTARLPPPSAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01233833;
90% Identity: iTF_01233833;
80% Identity: -