Basic Information

Insect: Vespa mandarinia
Gene Symbol: gtf3a
Assembly: GCA_014083535.1
Location: JACHAV010000006.1:4372308-4378222[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 5e-05 0.0036 17.2 0.1 2 23 750 771 749 771 0.97

2 17 6 4.3e+02 1.2 0.6 1 19 777 795 777 796 0.91

3 17 1 73 3.6 1.1 3 23 805 825 804 825 0.97

4 17 0.00011 0.008 16.1 1.2 3 23 834 855 833 855 0.98

5 17 0.002 0.14 12.1 2.0 1 23 862 885 862 885 0.95

6 17 7e-05 0.0051 16.7 0.7 1 23 891 914 891 914 0.94

7 17 0.48 34 4.7 0.9 2 23 922 942 922 942 0.94

8 17 1e-07 7.4e-06 25.6 2.1 2 23 948 969 947 969 0.97

9 17 1.7e-06 0.00012 21.8 0.2 1 23 975 997 975 997 0.99

10 17 0.00041 0.03 14.3 2.4 2 23 1009 1031 1008 1031 0.95

11 17 0.0059 0.42 10.7 2.5 1 23 1037 1060 1037 1060 0.96

12 17 0.014 1 9.5 3.0 3 23 1083 1104 1082 1104 0.95

13 17 0.0002 0.014 15.3 1.5 2 23 1111 1133 1110 1133 0.96

14 17 2.9e-05 0.0021 17.9 1.0 2 23 1141 1162 1140 1162 0.96

15 17 0.0009 0.065 13.2 2.3 1 23 1168 1191 1168 1191 0.96

16 17 0.24 17 5.6 3.2 2 23 1198 1219 1197 1219 0.96

17 17 0.0071 0.51 10.4 2.6 1 23 1225 1247 1225 1247 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	5e-05	0.0036	17.2	0.1	2	23	750	771	749	771	0.97
2	17	6	4.3e+02	1.2	0.6	1	19	777	795	777	796	0.91
3	17	1	73	3.6	1.1	3	23	805	825	804	825	0.97
4	17	0.00011	0.008	16.1	1.2	3	23	834	855	833	855	0.98
5	17	0.002	0.14	12.1	2.0	1	23	862	885	862	885	0.95
6	17	7e-05	0.0051	16.7	0.7	1	23	891	914	891	914	0.94
7	17	0.48	34	4.7	0.9	2	23	922	942	922	942	0.94
8	17	1e-07	7.4e-06	25.6	2.1	2	23	948	969	947	969	0.97
9	17	1.7e-06	0.00012	21.8	0.2	1	23	975	997	975	997	0.99
10	17	0.00041	0.03	14.3	2.4	2	23	1009	1031	1008	1031	0.95
11	17	0.0059	0.42	10.7	2.5	1	23	1037	1060	1037	1060	0.96
12	17	0.014	1	9.5	3.0	3	23	1083	1104	1082	1104	0.95
13	17	0.0002	0.014	15.3	1.5	2	23	1111	1133	1110	1133	0.96
14	17	2.9e-05	0.0021	17.9	1.0	2	23	1141	1162	1140	1162	0.96
15	17	0.0009	0.065	13.2	2.3	1	23	1168	1191	1168	1191	0.96
16	17	0.24	17	5.6	3.2	2	23	1198	1219	1197	1219	0.96
17	17	0.0071	0.51	10.4	2.6	1	23	1225	1247	1225	1247	0.98

Sequence Information

Coding Sequence: atgcagaATTCAAAGCTTAATAGAGATCATGATTATGGagaattaatattagaaaatcataaatatacgACGAATATCAACAGTCAAAAAGGTAtgcttgaaaataatttatcgaaaactGCTTTGAAGCCTATGAGAATTGCTTcaacaataaataaagatacgtTAGGTGGACAAGTTaaagatataaatgaattaaaaaaaataacacctCGTGTAAAGCTTTTGGCTCACGATGTAAATAGTTTGAAggaattaacaaaaatttcattgcaaaataaatcattaaaacaagaaaaaatatcaatgtttGAACATACAAAGCaggaattaaaaaagtattgtCGAACTTGCGCTGGTTTGAAGCTTCCATTAGTTGATATTTTCAGTGAAAAAGGTATTCAAATGAGGCTAAGCCAACAGATACAACatttagaagaaataaatccaCATGACAGTTTATCCACTCAAATGTGTATGGATTGCATTTGTGATTTGAAAATGagttacaaattttttatgcAAATTAAAAAAGCTGAAGTTAAGCTAAAATCAATTCATGTTACATTAACTGATACAGTTGCACGTAATATAGAAGCAGAAAAATTGCAGTCTTTAACTAACAATCAAATTAATCAAAAGCAAATAGAAGAGACTTATGATTGTACTATGGTTCCTGCACCAATGGGCACTGATAACGATGAAAATGTTCCAAAAATATCTGcaatttattctttaaagGATATTTTAAACTCAATATCTtcagaaagtaaagaaaaagagaatcctGATGTAACATTCAAAACTGAGTCTGACATTTTTGAAGATGTTACAGGTGAACATCATAGCGATGATAACGAATCCATAGAAGAATTTGATCCAGATGATCCGCCATTTCAACCCGATAGTTCTGACGCCGCAGAATCCGATGATGAAATTGAAAGTAGTCATGTAGATAGAAGACGAAATACACATAAGAAGGAAAATGTAGATAAGGCAAATAATCAATCTTTTGTGTTCCATGATTCATCGCGTAATAATTTGATACAGAATCAGGATGATGTTAATCAAGATTCCAATCAAaccgtatataaatatgacaTGGCATTAAAGGCTTATGTCAAAGTAGAGACTGCGCAGGACAATATATTAAGTTCCAAATTACAAATTGGCCCAAAGATTGAAATTAAAGATAATGAATTTGGAAAAGACACTCCAAAGCAACCAAATATATTGAAGCGCAGACTTTTACagcaaacaaaaaaggaaggcTTAGGAAATAATGAAGAGTTAAAATGTACCTCGACTAATGTATCTGATACTAATGAAAGTCCGAAAGATccgaaaattcaaaaattagATATACAAAACCCATTAAACATTAATGATCCCCAAGAAGACGGAATTATGTATGTTACTGTGAAAGGTTCTAAACcaaacgaaatattattagtaaaagttaaaaagatGGATAAAccatttgaaaagaaagatgataaaaattcaAGTAAAGTAAAAGGTTTTGATTTTAAACCAGTTGGCaaaattttaaagagataCGAAACGTTAAcaacaaaggaaaagaatttatttacagAACGTACAAAAAAGTTGGATAAGAGAGAACAGATTATAGAAGAACAaatagaagaatataagaaaaaacgtGAAAAGGTTTTAGGCAGTCAGTCAAgtttaacaatgaaaaatgaagaaacgccaaatcgttttattaaaCGGGTCGAAAGTTCTGATGATCAAAAGCCAGTTATATATGAAGAAAgtaattcaaatataaaagcaGAATCTGACGTAGACAGTAGTACAATGAACAGTACTATTCtcaaagatgaaaataatatttcagatGTTTCAGATTCTCTGCAAGATAAGTCAGTCCAAGAAAAAGCATATGTGAACACAAAGGAGTATTTATCACGTTTAGCAAAACTTAAATTAAAATGGgaagaagcaaagaaaaagaaagaatatttacaGAAAGAACTTGATCAGTCTTATACAGAAGGAAATATGGAAAAATTATCACGCATtttaggagagaaagaaaaaaatttgctaGAGTTTCAAGATTAtttaaagcaaagaaaaattgttatcaCCAGATTAAAAGATGAAGACATCATTTCGCTTTATGAAGACAGAAATAACACATCTCTCCAAAAAAGTTTACCAGACTTGATTGATGAAACAACACCAGCAGATTATATACCAGAGGAACATTATTTAGAGTGTGATTATTGTCCGGAAACGTTTGCTTCAAAAGAAGTTCTCGAAGATCATTTGAAAACGCATGATTTCAAAATTATGCATTACTGTGAAGACTGTATGGAAGAATTTCCTACaaataaagcaaaaagaaatcataatgtggtatgttttaaaaaattattatgtaaatattgtgATGTAATGTTAGATTCGAAAGGCAAAAAGAGGCAGCACGAGCAAAAACATTGTGATAATATGTTTGGCCAGCTATGTGATATTTGTGGTGAAAAATTCAAACATCAAGGGACATTAGATCAACATGTTAAAACGCAACATATGAGCTgggaaaaaatttatcaatgtcCAAAATGTCCAAAAAAGTTTGCTTTCAAACAAAAATTGAGCTTTCATTTAAAATCTGTGCACACAACATTGAGAGCTTATTTATGTGAAGATTGTGGGGCAGACTTTAAAAACCCCGCCAGTCTTAGACATCACCGAATTCGTAAACATCAACCTGTAGGGAACAAAAGGGAGTGCCCGGTTTGTCATAAATTAGTACCATTTTATAGTCTTTCAAAGCATATGTATACTCACAAAGCTTACACTATACAATGTCCGCATTGtgataaaatgtttaaaaatagttCAACGTTGAAACAACATGTTAGAATACATGAAGATCAACGACAATATCGTTGCGATACTTGCGGCGTTGGATTTAATAGGAGGGATGGGTTAAGGCTCCATATGAGAGTTCATGAAAAAACTGATAGTAGAGGATTGAAGGAATGTTCTTGTCAAGTGTGCGGCGAGAAATTTCCAAATCATTCTACACTTGTTATACATAGAAATCGCGTACACAAAGATGGAAGGCAGTATACATGCCATATATGTAATAGATCTATGATTTCAACAAGATCATTAGAATGGCATATGTCTCATATACATAACGAATCACTTCCTGGCATTGTGAAAGAGGCTGTAGATGGATTaccagaaaaaagaagagttgCTTGTTATCATTGCAATAAAACTTTCAAAACGGAAATGATTTTGAgaacacatattaaaaatactcATATGGAGAAAGATCCTATGAAGTGTTTGGATTGTGATATGACGTTTACTTCTGAGGTTAGATTGAGGCATCATATGATGGTAACTCATAATAGGCTGGAAGGCACATTGCCGTGTCCTCATTGTCCAAAACGATTTGTAAATCAACTTAGATTAAAGACTCATATGATATCTCATTCTGAGGAAAGACCGTATACATGCGAAATATGTGGTTTTAACTTAAAGACAAAGATACAACTCATCAAGCATCATCAAAATAGACATAGCGACGAAAGACCTTTACAGTGTAGATACTGTCCTTGGAGGTGTAAACAAGTAAGCGCGCTTGTTTGTCATGAAAGAACTCATACAAACGAACGACCATATTCGTGTAGTGTTTGTAGACAACGTTTTAAGTATTTGGGTGATAAGAACAAACATGAAAGACGTCACGAAAGTTTAGGAGGATCTGGATTTAAAAGAATAGTACCTGGCAGAAATATTAAGCACTCGAAAGTTCAAGAAGAAACCTCTTGTTCTGAACAAGAACAGGAAGAACTGACACGTGTAAATGCACAGCTTACAGAAGGTCAATATGAAGAACAATCAAGTCAAccatttgaagaaaaatttgtgaAAGAACAAATTGTCAAATTTGAAGAACCAGAAATTACAGAAGAATACGAGCAGGTCTATGAAcagGATTATGAAGAAACATCGAGGGAAGCTTCCGAAGCTGCAGAAGTTATCATGAACATGGAGGATACCACTGTATATACAGAAGAAGTAACCGCAGACAACATAGAATCTGCAGAAATAATGGCAGATGAAATGAtgacaaatgaaattttacagAGTGGAACTGTAGTACATTTACAACAACAAGATGATTCTGGAAAAATTCAAGTTATTCCTGTAATGTTATCTTTACCTGACTTATCTGATACGAACGCAGAAGTCAATTTAGCAACGGCATCTATAATGTATAACAATTAA
Protein Sequence: MQNSKLNRDHDYGELILENHKYTTNINSQKGMLENNLSKTALKPMRIASTINKDTLGGQVKDINELKKITPRVKLLAHDVNSLKELTKISLQNKSLKQEKISMFEHTKQELKKYCRTCAGLKLPLVDIFSEKGIQMRLSQQIQHLEEINPHDSLSTQMCMDCICDLKMSYKFFMQIKKAEVKLKSIHVTLTDTVARNIEAEKLQSLTNNQINQKQIEETYDCTMVPAPMGTDNDENVPKISAIYSLKDILNSISSESKEKENPDVTFKTESDIFEDVTGEHHSDDNESIEEFDPDDPPFQPDSSDAAESDDEIESSHVDRRRNTHKKENVDKANNQSFVFHDSSRNNLIQNQDDVNQDSNQTVYKYDMALKAYVKVETAQDNILSSKLQIGPKIEIKDNEFGKDTPKQPNILKRRLLQQTKKEGLGNNEELKCTSTNVSDTNESPKDPKIQKLDIQNPLNINDPQEDGIMYVTVKGSKPNEILLVKVKKMDKPFEKKDDKNSSKVKGFDFKPVGKILKRYETLTTKEKNLFTERTKKLDKREQIIEEQIEEYKKKREKVLGSQSSLTMKNEETPNRFIKRVESSDDQKPVIYEESNSNIKAESDVDSSTMNSTILKDENNISDVSDSLQDKSVQEKAYVNTKEYLSRLAKLKLKWEEAKKKKEYLQKELDQSYTEGNMEKLSRILGEKEKNLLEFQDYLKQRKIVITRLKDEDIISLYEDRNNTSLQKSLPDLIDETTPADYIPEEHYLECDYCPETFASKEVLEDHLKTHDFKIMHYCEDCMEEFPTNKAKRNHNVVCFKKLLCKYCDVMLDSKGKKRQHEQKHCDNMFGQLCDICGEKFKHQGTLDQHVKTQHMSWEKIYQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECPVCHKLVPFYSLSKHMYTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHEKTDSRGLKECSCQVCGEKFPNHSTLVIHRNRVHKDGRQYTCHICNRSMISTRSLEWHMSHIHNESLPGIVKEAVDGLPEKRRVACYHCNKTFKTEMILRTHIKNTHMEKDPMKCLDCDMTFTSEVRLRHHMMVTHNRLEGTLPCPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVPGRNIKHSKVQEETSCSEQEQEELTRVNAQLTEGQYEEQSSQPFEEKFVKEQIVKFEEPEITEEYEQVYEQDYEETSREASEAAEVIMNMEDTTVYTEEVTADNIESAEIMADEMMTNEILQSGTVVHLQQQDDSGKIQVIPVMLSLPDLSDTNAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01512335;
90% Identity: iTF_01512335;
80% Identity: -