Basic Information

Gene Symbol
CSRNP3
Assembly
GCA_014083535.1
Location
JACHAV010000003.1:5435548-5462078[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.24 3e+03 -2.6 3.2 85 109 88 112 24 124 0.56
2 5 0.77 9.6e+03 -4.3 10.4 67 144 297 371 248 381 0.56
3 5 0.27 3.3e+03 -2.8 0.3 70 140 395 464 367 486 0.54
4 5 0.13 1.7e+03 -1.8 0.2 25 102 638 710 627 729 0.47
5 5 7.2e-101 9e-97 322.7 7.5 1 218 895 1105 895 1105 0.92

Sequence Information

Coding Sequence
ATGATCGAGAAGACTGATTGTGATCTCGCGAATTGTGAGATGGAGGTCACGCGGGAGATCCAGACAGGCCTAGTAGAAGCAACGCGTAAGATTacggagaaggaagagaaggaaattgatgaaaagaacgaagatggtacaacaacagcagcaacaacaacagcagcagcagcaacaacaacaacaacaacaacaacaacaacgacttACAGCGAATCGAGCTGCACTCTTTCGGACAAATTCGTTCCCGAATGTTTtctggaagaagaagaagaagaagaagaagaagaagaagaagaagatgatgatgatgatgaacatATGCAAGTTGATGAGAATGTCAAAACCCAATCGAAGACGATTATTGACGTCTTTTCGGGTTctttgtcatcgtcatcaccATTGCCCTCGCCTTCGCCATTATCTTCGCCTTCGTCTTCATCCTCATCtttgtcttcgtcttcgtcttcatcttcgtcttcttcgtcgttgtcAAGAAAAAGACCAGCCGGTAGCGACTTTCTGTCGATCGACTCGGATGCCAAGAGAATCGGCGTGGAGATGTCCGAGGAAGAAACGAATCAGTTGAGAAACGACGTCAAAAGACTTTCGCCCGTTGAGATAAGCCTTCGAGAACGTACGTTAGGTGAGATCTCATTGACTCCGGATTCACGGTTGTTTTCCGAAGATGTCAATAATGTCACTTCGGAGAATTTATCATCGTCTAATGTTTCTCGAATGATTCGTCATAGGCAATCCATGATTAATGATTTCGTTGTCGATTCTAATGACGATAGTACGAAGACACGATCAAAGtctaaaatttacaaaattgatgCGACGATTGAAAAAGACGAATGTACAAGTAGCGTCGAAATCACGGAAAACGTCGAATGTAAGTTGCATCGTAACAAGGATAACAtagatgatgatgttgataatgatgacgatgacgatgatgacgacaatgatgatgatgatcatgataatgataatgaagatgatgatgatgacaattcCTGTTGCTCGACGTCGTTTCGTGAGAATGAAGTTCTCCCTTGTGAAGACATCAACGAAGTCGTTGACAAGTCCAAAGCCAATACGTCCGACGTCGTAAAGTCGGAGAAAGAAGGTACAGATTCTCTGCGCCGTTTGGTTGTCATGCTGAATCGTGTAGACGAAGAGATCAAAGATAAGAAGACGGATCTTAAGGAATGCGAAGACAATGTTGTTAGTGCGACGAGACCGAGGAAGATTACTCGAGAAGACGGTACAACTATAAAGGACAATGTGTACGAGACGATGCTAAAGAGTTCTTTGTCGTCTCGTAAACTGATCGTAGTGCTAAATCGTATAGACATGAAGGAAGCtgttaaaaaggagaaagaaaatgttgatGGATGCGTTGATAGAAATATAGTCGAGTCTATGGCAGATTGTCGAACAAAAATTGATAGTACGATGCAAAAAATATGTACTCGTTCGTCTTCCTTGCAAAAGCGATTAGACATGAACAATATTGTAAGTACGAAAGATAGATACacggaagaaaataacaaaagcgATTCGATGCTACTCGATAATAGTCATTCGGTAGTCGTGTTGTCTTGTattaagaagagaaataacgaTGTAAGCAATTTGAGGCAAGCCGAATTAAACGAGGAAGTTGAAAATGTAGGTTCGGAAACGAAAAGGGCATTTTCCTCGACGGTGTCCATTGTGGCTAAGTATAATGATTCAATTTCGTTGGACTCAAATGGAATAGCGTTTGATCAAGGCACACGTTAttcgataagaaataaaacgaaaacgatCACCGATGAGGAGCTCGGTGAGAAGGAAGAATTACGagttgaaaaaaatgttccaAGGAGAAGTAGCGTTTtacaaaaatcaaataaagaaGAGGTGCCTAGCGGTGGTGGAGCCGCGGTGGTGATCGAGAAActcgaagaagaggaggaagttGTTCTAGCGACGTCATCGATTATgccgaacgaagaagaagacgatcgTCTGCAAAATCTTGATACGTCTGATTTAGATTCGTCCGAGACAACACCAGGTTCACCAGAAGAAACGCTGGAAGCTTCTGCCGATGTCCAGGAAGCGATTGATACCGAGACGGAAACCGAGACCGGTTCCGACAGTTCCGAAATACCAACGTCCATACCGATTGTTCGTATTCGCGATACCAGCTGCGAAAGAGAAGACATAGCCGATGCAGCGAATAATTGTCCCGAGAATGAGACTCTCTGCTGTGACGAGATAGCGTCCGAGATGATAACCAGGCTCGAGCCAGAAAAACCAGAACCTTTCACCGAGGATTCCGCGGAGAGTTTAGCGTTGACGGCTGGTGCAAGGGACGAGGTTAGATCCGACGGGAGCGATTCTGGCCTTGGAAGCGAAATACCTGGGGATCCTGGACCAGCACCAGCTCCAGAGAGCGATTCCGAGACGTCTTTTCTCGATAGAATACCGGATGATATTCTTTCCGACAAGGAAAAAGctGTGAACCAATTGGAGAGCTTTGTGCCGGAAACGAGTGTCCCTGGGGCATCGCAAGCTACGTTAGCGACGTTCCGTAATCCTCCGAAAAGCAATCTTAAACGTAGATTGACTGATTGTATGGAAGGAGAACCGAGTCCTAAAAGAAGTAATACTACCGAGGAacctataaaaaagaaaagaaacattcatTTTGATGCCGTCACCGTTTACTATTTTCCTCGAGCGCAAGGTTTCACTTGCGTTCCTTCGCAAGGCGGTAGTACTCTAGGCATGAGTGCTACTCATACGCACGCCGAGAGATTTTCTCTTTCCGAGCATGCGGCCGAGCAAAGGAGATTGCATCGGGCTAGATTGGCGCAATTACGTTCAGAACGTGCAGCAAATTGCGCAACGGAGGCTGCTTCGAGTTCGGAAGATCCGAGCGACGATACCGACGAAGAACCCAGCGACAACGAGGAGCTCGACATCGACAGTTATTACTTTCTACAGCCTGTACCAACGTGGCAGAGACGAGCGCTTCTTCGTGCGGCCGGTGTACGTAGGATAGATGCCGTCGAGAAGGACGAATGTCGAGACATCCGTGCGAGTCGAGAACACTGCGGCTGTGGATGCAAGGGATATTGCGATCCGGAAAGTTGTCCTTGCAGCAGAGCGAACGTCAAGTGCCagGTCGATCGTGCCGGTTTCCCTTGCGGTTGTACCCGGGACGGTTGTGCCAACAGCTCCGGTAGGATAGAATTTAATCCGGTACGAGTGCGGACACACTTCATACACACGTTGATGCGGCTCGAGTTAGAGAAGAAGCAAcgcgaagaagaaggaactGATCACGAGGGCACCGACAATCAGAATAACAAAAGCGGACCATTGCGAGATATCAATTTGGGTTCCCTAATAGACAATTCAAATACGGAAGCGTGTATAACCGGTGGTGGTTTTACAACGTTACACTATGAAAATCATGATGCCGGCAATGGCAGTTCGAATTGTCAACCAGAAGTACCTGGTACGCGAGAAGATAGTTTAGATCTTTATGCTATAAGAGACGATTGTTATCCGAACGAAGACACGGTCGATGGTACGCAGAGTGGCCAAAGAAAATTGCATCCCGAATTTAGTCAAGCTTTTCAAACATTTTCGGGCCAAACAGCAGGTGCAAATATGAATTTTCAACAGACCGCTTATCAGGATTATCAGGCTTATACAAATCTTCCTTCCACGTCTAGGGTTCAATTTCAGCCGCAATTTCAACCGGTGCCCGGAAGCCCAGGTTTCTCGCATTACGCGGTCTATGGGCAAGATGGCACATCTGTGCAGGACAGTTGCCAGGTACATCCTGGGCAACATTCTTCCAATTACGAGGCTAACTTCGCGCAAGACGAATCGACCGGATCGCAATATACAAATTTGAATTCTGTGCAGCCGATGAACGGTGGAGTTCAGCAGATAGGTAAGCTAGAGCCGTTCTCGGAATTGCTATCCGGTAGGTATTCGTATTATGGCGAGATAGAGCCGCAAGCGCATGGTACTTATCATGGAAATGCaaataaagaaggagataAGGATCAAACTACGAACGAGCAACAATCGGAAAGTACGGAGGAATGCGATGAAAATTTTGGAGAGATCATTAAAAAATCTATGGTGGAGACGGTATCCGCTTAG
Protein Sequence
MIEKTDCDLANCEMEVTREIQTGLVEATRKITEKEEKEIDEKNEDGTTTAATTTAAAATTTTTTTTTTTYSESSCTLSDKFVPECFLEEEEEEEEEEEEEDDDDDEHMQVDENVKTQSKTIIDVFSGSLSSSSPLPSPSPLSSPSSSSSSLSSSSSSSSSSSSLSRKRPAGSDFLSIDSDAKRIGVEMSEEETNQLRNDVKRLSPVEISLRERTLGEISLTPDSRLFSEDVNNVTSENLSSSNVSRMIRHRQSMINDFVVDSNDDSTKTRSKSKIYKIDATIEKDECTSSVEITENVECKLHRNKDNIDDDVDNDDDDDDDDNDDDDHDNDNEDDDDDNSCCSTSFRENEVLPCEDINEVVDKSKANTSDVVKSEKEGTDSLRRLVVMLNRVDEEIKDKKTDLKECEDNVVSATRPRKITREDGTTIKDNVYETMLKSSLSSRKLIVVLNRIDMKEAVKKEKENVDGCVDRNIVESMADCRTKIDSTMQKICTRSSSLQKRLDMNNIVSTKDRYTEENNKSDSMLLDNSHSVVVLSCIKKRNNDVSNLRQAELNEEVENVGSETKRAFSSTVSIVAKYNDSISLDSNGIAFDQGTRYSIRNKTKTITDEELGEKEELRVEKNVPRRSSVLQKSNKEEVPSGGGAAVVIEKLEEEEEVVLATSSIMPNEEEDDRLQNLDTSDLDSSETTPGSPEETLEASADVQEAIDTETETETGSDSSEIPTSIPIVRIRDTSCEREDIADAANNCPENETLCCDEIASEMITRLEPEKPEPFTEDSAESLALTAGARDEVRSDGSDSGLGSEIPGDPGPAPAPESDSETSFLDRIPDDILSDKEKAVNQLESFVPETSVPGASQATLATFRNPPKSNLKRRLTDCMEGEPSPKRSNTTEEPIKKKRNIHFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRLHRARLAQLRSERAANCATEAASSSEDPSDDTDEEPSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEEGTDHEGTDNQNNKSGPLRDINLGSLIDNSNTEACITGGGFTTLHYENHDAGNGSSNCQPEVPGTREDSLDLYAIRDDCYPNEDTVDGTQSGQRKLHPEFSQAFQTFSGQTAGANMNFQQTAYQDYQAYTNLPSTSRVQFQPQFQPVPGSPGFSHYAVYGQDGTSVQDSCQVHPGQHSSNYEANFAQDESTGSQYTNLNSVQPMNGGVQQIGKLEPFSELLSGRYSYYGEIEPQAHGTYHGNANKEGDKDQTTNEQQSESTEECDENFGEIIKKSMVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01514150;
90% Identity
iTF_01512178;
80% Identity
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