Vman007462.1
Basic Information
- Insect
- Vespa mandarinia
- Gene Symbol
- SMARCC2
- Assembly
- GCA_014083535.1
- Location
- JACHAV010000013.1:1872097-1876882[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.6e-15 6.6e-12 44.8 0.2 3 44 639 680 637 682 0.95
Sequence Information
- Coding Sequence
- atgCTTGCGTTAGGCCCAAAAAAGGATGGAGGACCCAATGCCAAATTTTTTGATTCTGCGGAAATTCTCGCACAACTTGATGGGGTTAAACAGTGGCTCctgaaaaattgcaaaaagTATGTACAAACAGATCCTCCTACTAACAAAACCTTAGCAACTTTAGTGGTACAATTACTTCAATTTCAAGAGGATAACTTAGGAAAAAATGTAACTAAACCACCTATGACAAGACTTccaaTGAAATGTTTCTTAGACTTTAAACCTGGAGGAGGTTTGTGTCATATACTATCCACTGCTTATCGATTTAAGCAAGAACAAGGATGGCGGAGATTTGACTTTCCAGTTGGAAAGTCAGGATCTCGTATGGATCGTATAGTAGAAATGTTAATGGCAGCAGAGCGTGCTTTAACtcaaaatagatgtttgactATACCAAGCGTTTTTGTAAGAGCTGACGTCGATAAATCAACAGctacaaaagtaaaagaagcaGTAAGACGACATCAAGGCACAGTTGTTGAAAATGAAGCAGATGCtacacatattatttttccacCAGTAGATCCAATGGAAGAAGAATGTGCACGACCATGTATGAGACGTGAAAGATCGGTTCTTCTTCATTGGTACTACTTCCCAGATAGTTATGACTCTTGGACTACTCTAGATCTTCCTTGGGAATTTCCTGAAGGAACTCTTAATATTACAAGTACAAGatcGGTATATAAGGTATCGGCAACTTGGGCGCTTGATTTAGATCAATATAATGAATGGATGAATGAAGAAGATTATGAGGTAGATGATAGTGGACAAAAGAAAGTTCACAAATATAGACTTTTAGTAGAAGATTTGATGGCACAACCTGCTCACCCACCACCGGGAAAAaagccaaaaagaaaaagatcaccTAGTCCCCCACCAAAAGTTGGAAAACGCAAAAGTAGCAGGGCTCCATCAAATATACAAAGCACTTCATCAACTTCTTCGGCAGCTACTCCAAAAAAATCACGCGGTGGTggggacgaagaagaagatcttACTCAAGGGATGGAAGATCCACCAGCGGAACCTCGGATTGTAGAGGTTGTTGCTGCTCCTGCTAATCCACCGGTTACAGGTCAAAGTAGTAATGCAACTACAAGTAGTAGTTTGGCATCAActggaaataaaaaacaagataatGAACTACAACCTCTTAAATCCGGTAATATGGCAGATTTGGATGAACCAATGGAAgGTGATAAAGGAAGTTCTCAGGGTACTCAAgatagagaggaaagagatacaagcaaagaaagaggagaaggaggcaAAGGAGATGAGCCAGAAGATAATGTTACGGAACAGACACATCATATAGTTGTACCTAGTTATTCTGCTTGGTTTGATTATAATTCAATTCATACTATTGAAAAAAGAGCATTATCTGAATTCTTCAATGGCAAAAACAAATCTAAAACACCAGAAATTTATCTTgcatatagaaattttatgatCGATACATATCGATTAAATCCGACGGAATATATCACATCGACAGCATGCagGCGCAATTTAGCTGGTGACGTTTGTGCGATTATGCGCGTACATGCTTTTCTGGAACAATGGggtcttattaattatcaagtaGATGCAGAATCCAGACCAACGCCTATGGGTCCACCCCCAACATCTCATTTTCATGTATTATCAGATACTCCATCAGGTCTTGCACCAGTTAATCCAAATCCACCAAAAACGCCACAACCATCGGCAGCAAAAACGTTGCTTGATCTCGAGAAGAAATCTACTACAGCGCTCGGTGTCGAAGAAAAAGTTTCGGCCAGTGCTATGACAAACTTTGGTTTAAAAATTGATCAGTATTCTAGGAAACCAGCAGTGTTAAAGAACAAACAAGCGGCCGGGGCAACGCGCGATTGGACGGAGCAAGAaacacttttattattagaaggTTTAGAACTTCATAAAGATGATTGGAATAAAGTCTGCGAACACGTTGGTTCTAGAACGCAAGATGAGTGCATATTACATTTCTTACGATTACCCATAGAAGATCCGTATCTTGAAGAAGGTGGTCCAGAAGGTTTAGGACCTCTTGCATATCAACCGGTACCTTTCTCAAAGGCTGGAAATCCGGTTATGAGTACGGTCGCATTTTTGGCTTCAGTCGTAGATCCTAGGGTGGCAGCTAGTGCGGCAAAAGCTGCTATGGAAGAATTTGCTGCTATTAAAGATCAAGTTCCAGCTGCGTTATTAGATCAACATTTGCGAAATGTTCAAGCTAGTGCCAATTCAGAAGGAAAATTTGATCCAGCTGCTGGACTTGCACAATCAGGTATCGCTGGTACGGGACCACCTGAACCACCTGACGATACTACAACGCCATCAACAGCTGGTACCCAAGCAACAGCAGTTACTTCTCCACATTCAACAGGTCCAGCTTCtatagagacaaagaaagaggatCCAGAAAAATCAAAGGATTCATCGGACGTAGAACAATCCCCATTGGAGATAACGAAGAAAGAGGACGAATCTAAAGAGAGCGAAGACGATACTAAATCTTCTATTGATGCTGAAGCTATAgaggcaaaagaaaagaaggataaggtTGTCAGAGATGCCCAATTACAATCCGCAGCAGCGGCGGCATTAGCTGCTGCTGCCGTGAAAGCGAAACATTTGGCGGCTGTAGAGGAAcgcaaaataaaatctttggTCGCGTTACTGGTTGAAactcaaatgaaaaaattagaaattaaattacgtCATTTTGAAGAATTAGAAACAACGATGGAACGCGAACGCGAAGGACTCGAATATCAAAGACAACAACTTATTACCGAAAGACAACAATTTCATTTAGAACAATTGAGAGCAGCTGAATTCAGAGCACGACAACAGGCACATCAACGTTTAGcccaagaacaacaacaacatacTCCACCTGAGCAGACATAA
- Protein Sequence
- MLALGPKKDGGPNAKFFDSAEILAQLDGVKQWLLKNCKKYVQTDPPTNKTLATLVVQLLQFQEDNLGKNVTKPPMTRLPMKCFLDFKPGGGLCHILSTAYRFKQEQGWRRFDFPVGKSGSRMDRIVEMLMAAERALTQNRCLTIPSVFVRADVDKSTATKVKEAVRRHQGTVVENEADATHIIFPPVDPMEEECARPCMRRERSVLLHWYYFPDSYDSWTTLDLPWEFPEGTLNITSTRSVYKVSATWALDLDQYNEWMNEEDYEVDDSGQKKVHKYRLLVEDLMAQPAHPPPGKKPKRKRSPSPPPKVGKRKSSRAPSNIQSTSSTSSAATPKKSRGGGDEEEDLTQGMEDPPAEPRIVEVVAAPANPPVTGQSSNATTSSSLASTGNKKQDNELQPLKSGNMADLDEPMEGDKGSSQGTQDREERDTSKERGEGGKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKTLLDLEKKSTTALGVEEKVSASAMTNFGLKIDQYSRKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTVAFLASVVDPRVAASAAKAAMEEFAAIKDQVPAALLDQHLRNVQASANSEGKFDPAAGLAQSGIAGTGPPEPPDDTTTPSTAGTQATAVTSPHSTGPASIETKKEDPEKSKDSSDVEQSPLEITKKEDESKESEDDTKSSIDAEAIEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLRAAEFRARQQAHQRLAQEQQQHTPPEQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01473111;
- 90% Identity
- iTF_01513404;
- 80% Identity
- -