Basic Information

Gene Symbol
grh
Assembly
GCA_014083535.1
Location
JACHAV010000026.1:272637-329586[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2 1.2e+04 -8.1 9.0 108 127 96 113 73 136 0.45
2 2 5.4e-62 3.4e-58 196.0 0.0 27 221 812 1008 797 1010 0.92

Sequence Information

Coding Sequence
ATGTCCACGTGCACCGACGAAGGTGACACCGCACCCCTGCACATGCAGGAGGCTCTGTCTCCGGTGCAGGAGGGACCCGTGTCGCCGGCATCCTCTTCCCTAAGCAATCAAAATCAAAACGAAAACGATCAACAACAGGTTTTACTGGCGACGATGCAGCCGGTGAACGTGTTAGATCTACACGAACCTCCGGCTGTGCATCCGCTTCATCCGaagtatcatcatcaccatcaccaccgtcaccatcatcatcaccatcatcatcatcatcatcaacagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaacaacaacaacagcagcaacagcagcagcaacagcaacacgGTATTAGCGGGGATCCGGAGGACGTGCAGCAACGTGGTACGAACGGAGCGGAGGATCCGGACGGTCGAGTTACGCCGGTAACAGAAACGACTGGTGGAAATCCAACGTTGGCCGTCGGCGAGCACAAGATGATAGATCTTATTTACAACGATGGGCAAAAGACGGTGATGTACACCCACGACAAGGAGATAATATACGAGAATGAGGCCGATCGAGTTCAAGTGGTCGAGTATCCACCACCCCCGCCGTCGCCACCTTCGCCCTCGCCGCCCTCGGTCGTCAGCAGAACCGGACTACTACCGCCGACTTGCGTAGCACCAAGAACAGGGGCTGGTGCGACCGCAGCGgctcttcatcttcatcactATCCTCAATTGCAGTTGCAACACGAGGACGAGCTACCGAGCGTTCGTCACACCGTAACCGCCACCGCGCCGAATTGCGgaaccgccaccaccaccacgacCGTTCTCGTCCTTTCCGAGCTCGTAGCCGCCGATCCGGCAGCCGGTGCTGCCGCCGCTCAGCAGCTCACGCTAACGGCCGCGGCCGCTGCGGCTTCTCTTCGCGCTGGACGACGAAGTCGCAGCGAGGAAGAGACGAACGGCAGCGTCTCGGTGGGCGACGAGTctcagcaacaacagcaacaacagcaaggCTACGTTTCGCAACGAGAGAGtcaagaggaggaggaagaattAGCGGCGGAGGAAGCTGCCGCGGCTCAGGCTGCGGCTCAGGCTGCGGCTCAGGCTGCGGCTCAGTCCCTTCAGAGTGCCAGCGAGGAGACCGATCCGGAAGTTCACAAGAGAGTCACTGCGGTGCAGGTGCAGGTTCAGGGTATGGAGGGCGATTGGCGCGCCTACTGCGAGCATCCGCTCTCCGTTGCGACCGCGGCAATGCTAAATCTCCAACAACAGCATCAGGTCTCGACTGTCGCCAGCCATGGCGACGATCCAGCCGCTTCCTACGTCTACGAGTACTACAAGCTACCGGAAAAGGCCACCACCGACGTCAAGCTACCCCCGACGCACGAGCTTTGGTCCACGGGTGTGATGGGCCAGAAGCTGCTGGTGCAGGAGGCGCCTGGCTCCGGTTCTGGCTCGGCAAATCGCATGGAAGGCGGCGAAGGCGCCGGAGGTGGGGAGCTCCATCATTTCCTCCACCAATACAACCAGCAGTCTCACAGTCCTGGTCAGAGTCTCCAAGGTGGGCTTCCGCTTCCGTTGAGCCCGCAGTCGCTCCGACACGACGGTTCCTCCAGCGCCGGCATCACCGGAGTTAAGAGGGAACCCGAGGATCTCAGTTCCTCGCGCGGAGCTCAACAATCCAGCAAACGTCACAAACAGGCGCAACCGGAGAGTCCAACGCCGCCGGGAATGTACCATCACCATCAACATCAGCTACAGgTGCAACAGTACGGAAGTCCGTACGATCCGTACACCTCGTGCAGTCCACGATTACAGTCCACCGCGTACACTTCAACGTCCGGAACGAGCGCGACAAACAACGCGAATGCAAGTGGCATTCATCAGGAAACAACAGCCGTTTACGTAACGGGCGACGCTCTGCCACCACTCGCATCCTCGAGCTCTTCCTCGTTGTCGACGAGCACAGCCTCCTACACGAGATACGAGGTCGTACCCAGCTCTTACGCCACGACGCACGCGATACGCTCCTCCTCGAGCAGCAGCAAAGTTCTCACCGTCGATCTACCGAGTCCCGACTCCGGAATCGGTGCCGATGCCGTCACACCTAGGCAGGATCATCACGCACCTACGGCCCTTCATCAGTCGTCCTTCGACTATACGGAGCTTTGCCCCGGAGGAACGGCAACTGGTGCAGCGGTCGTTCTCGAGAGCGGAGCAGTGATACATCATCAACCTCTGCAACTACAGCTACAACAGAGCCATGCGCAAGCGCAGGTGCAGCGTGGCGGTCTCGTCGCGGCAGGTGCGACCAATCCTACCACGAATCCGAATCCACCGAGGTCAAGACCTTGGCACGATTTTGGAAGACAGAACGATGCCGACAAGATACAGATACCAAAGATCTTCTCGGCGTACGGTTTCAAGTATCATCTGGAGTCTCCCATCAGCACGTCTCAACGACGCGAGGACGACAGAATAACGTACATCAATAAGGGTCAATTCTATGGTATAACTCTCGATTACGTACCGGATCCGGACAAACCGCTTCTTAAGGCGGGACAAACGGTTAAGAGCGTGGTTATGCTGATGTTCCGAGAGGAGAAGAGTCCCGAGGACGAGATCAAAGCCTGGCAATTCTGGCATGGAAGACAGCATTCCGTAAAGCAACGTATTCTCGATGCTGATACAAAAAACAGCGTTGGTTTGGTGGGTTGCATAGAGGAAGTCGCGCACAATGCGATTGCTGTTTATTGGAATCCCTTGGAATCTTCTGCAAAGataaatGTCGCCGTGCAGTGTCTCAGCACAGATTTCTCCAGTCAGAAGGGCGTAAAGGGCCTACCGCTACATATTCAAGTGGACACGTACGAGGAACCCCCACCACACACTCACACTTACACGCCACCCTCGCATCGCGGTTATTGTCAGATCAAAGTCTTTTGCGATAAGGGAGCGGAAAGGAAGACTCGCGACGAGGAGAGAAGAGCAGCCAAAAGGAAGATGACGGCTACGGGTAGGAAGAAACTCGACGAACTTTACCACTCTGTCACGGAACGTAGCGAATTTTATTCCATGGTCGATCTCCACAAGCCACCCGTCCTCTTTTCACCGCCGGCCGAGCATGCCATCGACAAGTTTTCGACGATGGAGTTGTCGGGCTTCTACGGAggcggtggcggcggtggcggtggtgaCACCGACACCTCGTCACTCAGTAACGGTGAGGGCGGAGGATTGAAGGCTGGGGGTAGCAGCCCGTATCCTACTTGCGGTAGACCGAGCCTGCCCGCCTTGAAGTTCCACAACCACTTTCCGCCCGACAATCTCAGTAATCTACACGACAAGAAGGACTCCTTATTGATGCAGGTGCAGGAACTTCAAGGCTCGGTGCTTCAGGGTGTACAACAGGCCGGACTGGCCGGCACCGTAGTCTCCAGCGTCGGCAATCGCCTGCACCTGCAGCAACAGCCGTCGCATTTGCGTCCGGCCGACGCCGAGGAACGTGTCATGCTATACGTTCGTCAGGAATCCGAAGACGTCTACACACCTCTCCACGTAACGCCGCCAACTGTTCAAGGACTACTCAATGCTATTGAGTCAAAGTACAAAATTGCATCCTCGAGTATTAATAACCTCTATCGCAAAAACACAAAGGGCATTACGGCGAAAATTGATGACGACATGATCAGATTCTACGTGGACGAAGATCTGTTCCTCTTGGAGGTGAGTCATTCGAGATTGAACGGAGATGCCGTAAGCGAACGAAATTCTACCAATCCTGGCTCGCCAAGCGATCCAACCGATCCCGGGGAGGCACCGACGAGCGGTTACGACGTGACGCTTATCGAACTACCCTCGTCACCGCCACATCTCGCCCATTCGCCCCTTGCCAACTCGACGCACGGTCACGCACACGCGCACGTTCACGAAAGTGGAAACACGTGA
Protein Sequence
MSTCTDEGDTAPLHMQEALSPVQEGPVSPASSSLSNQNQNENDQQQVLLATMQPVNVLDLHEPPAVHPLHPKYHHHHHHRHHHHHHHHHHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHGISGDPEDVQQRGTNGAEDPDGRVTPVTETTGGNPTLAVGEHKMIDLIYNDGQKTVMYTHDKEIIYENEADRVQVVEYPPPPPSPPSPSPPSVVSRTGLLPPTCVAPRTGAGATAAALHLHHYPQLQLQHEDELPSVRHTVTATAPNCGTATTTTTVLVLSELVAADPAAGAAAAQQLTLTAAAAAASLRAGRRSRSEEETNGSVSVGDESQQQQQQQQGYVSQRESQEEEEELAAEEAAAAQAAAQAAAQAAAQSLQSASEETDPEVHKRVTAVQVQVQGMEGDWRAYCEHPLSVATAAMLNLQQQHQVSTVASHGDDPAASYVYEYYKLPEKATTDVKLPPTHELWSTGVMGQKLLVQEAPGSGSGSANRMEGGEGAGGGELHHFLHQYNQQSHSPGQSLQGGLPLPLSPQSLRHDGSSSAGITGVKREPEDLSSSRGAQQSSKRHKQAQPESPTPPGMYHHHQHQLQVQQYGSPYDPYTSCSPRLQSTAYTSTSGTSATNNANASGIHQETTAVYVTGDALPPLASSSSSSLSTSTASYTRYEVVPSSYATTHAIRSSSSSSKVLTVDLPSPDSGIGADAVTPRQDHHAPTALHQSSFDYTELCPGGTATGAAVVLESGAVIHHQPLQLQLQQSHAQAQVQRGGLVAAGATNPTTNPNPPRSRPWHDFGRQNDADKIQIPKIFSAYGFKYHLESPISTSQRREDDRITYINKGQFYGITLDYVPDPDKPLLKAGQTVKSVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESSAKINVAVQCLSTDFSSQKGVKGLPLHIQVDTYEEPPPHTHTYTPPSHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHSVTERSEFYSMVDLHKPPVLFSPPAEHAIDKFSTMELSGFYGGGGGGGGGDTDTSSLSNGEGGGLKAGGSSPYPTCGRPSLPALKFHNHFPPDNLSNLHDKKDSLLMQVQELQGSVLQGVQQAGLAGTVVSSVGNRLHLQQQPSHLRPADAEERVMLYVRQESEDVYTPLHVTPPTVQGLLNAIESKYKIASSSINNLYRKNTKGITAKIDDDMIRFYVDEDLFLLEVSHSRLNGDAVSERNSTNPGSPSDPTDPGEAPTSGYDVTLIELPSSPPHLAHSPLANSTHGHAHAHVHESGNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01089761;
80% Identity
-