Vcra004643.1
Basic Information
- Insect
- Vespa crabro
- Gene Symbol
- pnr
- Assembly
- GCA_025728115.1
- Location
- JAITYU010007275.1:98267-102629[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.91 2.2e+03 -1.9 0.1 3 12 231 245 230 252 0.67 2 2 8.4e-17 2e-13 49.4 5.1 1 35 422 455 422 456 0.98
Sequence Information
- Coding Sequence
- ATGTTTGATGTACCGCCCAAGTTTTACGAGCTGTGTCGCCTTTGTTTATCGTCGGACGGTGTCAAATTGTCCATATTCGAGGAGGAAGGCGCCCAGCGAAATTTCGCCGATAAGATATTAACTTGTCTCTCAATCACGgtaaaaGACGGTGATTCTTTACCACCAATCATATGTCACCGATGTGTATACAAGTTAGATGTACTACATAATTTTCGTGAAGTCTCGCATAAATCTGATGTCATATTGAAACAGTACCTGGATTATGCCAAGCAATTATCATCTAATGATAATCAGAAAAAATCTTTCTCCACTGCCAAAATAGCAGGATTAAATCCAGTACAATCTTTTATTCAATTAAATAAAACGTTATTTAATGAGGAACCAAATTCTCCAGCCAGCATTAATCAAAACATAATACCTCAAACGCAAACACACAGATTAGAGCTGCGTACAAATGAAGTATTAGAAAATGATAATATTAAATGTGAACCAGAGGATGATACGTGTTCTTATAGTTCAGATCCAGATAGACTCGAAATTGAGGATCGGGATGAGCAAGAAACTGAAGGTGAAGAAAATGGTTATGATATGACAATTAATAAACGATTAAAATTGGAAAATAATTATGAAAATTCCAAACCAAATACACCTGATCATAGTCCAGTTAATAGGATGGATACACCAGAGAGCAATTGTTCAGATACGCATATTGACCAAGAAACTACAAAGCTGTGGCAAGCCCTTGCGAATAATAGGAATTTGGAAATAACACGAACAAAAGGAGATAAATTAAATAATGGTTTTACTGGAGAAGCGACTAATTTGCTTCGATCTTTAATCAAAAATAGACAAATCGGTATTACTGCTGTCGATTCTGATAGAATATCCACACAAATAAGATTTTATAGGGACACTCAAGGAACTACAATCGAACATTCATTACCTGATTCTTCTGTACTTGGGAATTGTACCACTATGCCGTGCATAGAAAACAAAATTACTTCTATGGACAGTAATCCATCCAGTCCAGCTAGTATTGGACGAAAAGAAACGAAAGGTCGAAGAAAGCAAAGTTATCCTAGTAAAGCTCCAACAAGCCCAGATACTGCTAATTATCAACATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAACCTGGCATTGTTGAAGATCAAAAACAACAATTTGATCAGCAAACCGGTAATATCACAAAAAAAGTTGATATGTCTTGCACAAATTGTGGTACCATGACTACAACAATCTGGCGAAGAAATATGAAAGGTGAAATGGTTTGTAATGCGTGTGGACTTTATTACAAACTTCATGGAGTTAATCGTCCAGTTACTATGCGAAGAGACACGATACACACACGTAGACGCAGACCTAAAGGCGAAAAACCAACACGACATAGAAAGAAAGGAGATACGGCGGTAATACCACCACAATCTGAGCAAATGGATTCTGAAAGCGCTGATATGCTAGCAGCTTTGCGTCGACAAATTCAACCTCATCTCATGATGGCAGCATTAACGCCACCACGTATACCTGGCAATCACGGTCCACCAGCTGGTCAACTTAATTATTCACTTCCTTTGTCTAGTTATATGATGCATCATGTGAAAACTGAAGCTCAAGAACAACAACAATGTCTTTCGGTAAAGACTGAAGAGATAGAGGACGGAGATGAAGAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCTATTCCCTCATCTCTTCGCTCTTTATGTCTCGAAAAATTGA
- Protein Sequence
- MFDVPPKFYELCRLCLSSDGVKLSIFEEEGAQRNFADKILTCLSITVKDGDSLPPIICHRCVYKLDVLHNFREVSHKSDVILKQYLDYAKQLSSNDNQKKSFSTAKIAGLNPVQSFIQLNKTLFNEEPNSPASINQNIIPQTQTHRLELRTNEVLENDNIKCEPEDDTCSYSSDPDRLEIEDRDEQETEGEENGYDMTINKRLKLENNYENSKPNTPDHSPVNRMDTPESNCSDTHIDQETTKLWQALANNRNLEITRTKGDKLNNGFTGEATNLLRSLIKNRQIGITAVDSDRISTQIRFYRDTQGTTIEHSLPDSSVLGNCTTMPCIENKITSMDSNPSSPASIGRKETKGRRKQSYPSKAPTSPDTANYQHXXXXXXXXXXXXXXKKKKKKKKPGIVEDQKQQFDQQTGNITKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKGDTAVIPPQSEQMDSESADMLAALRRQIQPHLMMAALTPPRIPGNHGPPAGQLNYSLPLSSYMMHHVKTEAQEQQQCLSVKTEEIEDGDEENXXXXXXXXXXXXXXFLFPHLFALYVSKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01538418;
- 90% Identity
- iTF_01513145;
- 80% Identity
- -