Vcra012968.1
Basic Information
- Insect
- Vespa crabro
- Gene Symbol
- ZFX
- Assembly
- GCA_025728115.1
- Location
- JAITYU010023290.1:11170-15516[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.1 79 3.7 0.1 3 23 19 39 18 39 0.94 2 15 0.91 65 4.0 2.7 1 19 893 911 893 916 0.75 3 15 0.0076 0.54 10.5 1.8 2 23 997 1019 996 1019 0.95 4 15 0.0075 0.53 10.5 0.1 2 23 1032 1053 1032 1053 0.98 5 15 2e-05 0.0014 18.6 2.1 2 23 1056 1077 1055 1077 0.97 6 15 0.019 1.3 9.3 0.4 1 23 1083 1105 1083 1105 0.95 7 15 2.2e-05 0.0016 18.5 4.5 2 23 1112 1133 1111 1134 0.95 8 15 0.15 11 6.4 1.7 5 23 1147 1165 1146 1165 0.96 9 15 2e-05 0.0014 18.7 1.5 3 23 1172 1193 1171 1193 0.97 10 15 0.009 0.64 10.3 0.3 2 23 1209 1229 1208 1229 0.97 11 15 5.9e-05 0.0043 17.2 0.7 1 20 1235 1254 1235 1257 0.92 12 15 7.4e-05 0.0053 16.9 2.7 1 23 1265 1287 1265 1287 0.99 13 15 0.0021 0.15 12.3 3.2 1 23 1293 1315 1293 1315 0.97 14 15 3.7e-06 0.00027 20.9 3.9 1 23 1321 1343 1321 1343 0.99 15 15 0.0013 0.093 12.9 6.3 1 23 1349 1371 1349 1372 0.96
Sequence Information
- Coding Sequence
- ATGGATCTTGGCATCGTAGGTAATGCAACGGGTGCATCCGGGGGGGCCGTCGCCTGTCCCGTTTGCACTCTTTATTTGCGCGAGGGTATCAGCCTTCAAAGACACTTGGATACACATCCCAAGGAACAGGTCATAGAGGCCCTCATTAAAGCCAGCTCTACGACCTCTCAACAGACACAACAACTTCCATCGCCAACATCAGTACCTCCTGTTCCTTCCAGCATTCAATCACCACAGAATACACCGCAGCACATCCAACAGACGACTGCACATGTTTCTGCTCAGTCTCCATATCCCATAGGGCCTATATTTGAATGTCCACCGATTGGTACTATGATGCCTCCTCAATTTGCCTCGTTTAGTTATCAACAATTTGTCAATAATGGGACCATGATGATACCACAGTACGCAATGGCTCCGCAGACTAATCAGATGATGCAAATGTTGTATAATCCATATGGTATGTATCAGCAGCAACAGATACCCACTGTTCAAATGATCTCTCCGGTTGCAGCCATTCCTAATACCACAAGGATAAGACCTGTGGTTACAATGGCTGGTGAAACCAATAACAGGACCACCATCACCGTACCTGTAAATAGTTCTGAGCCAAAGCAGATCTTACCTGAGATATTGCCAGAGCCTGAAGTAGAAAATGAACAAGATCTGCCTGACATAAATTTCCCAGCATCCCCCGAAGTAGCTAATGAAAATACTTCTATGCAGCAAGATGGAAATGAAAATAGTAGAATTCAAATAGAACATAGAGGCCAACAGATACAAAATCCAACCATTCAGGATCAAAGTTCTGTGCAGCACGAATACAATAGCATTCCTAGATCTTTAACTATCGCTTGTAACATTGAAAATGAAGATGATGACAATGCTGAAAGTGTATTGCCTGATATAGACGAAAGAGAAACGGCACACATAGTTGCATCGGTTGTCCAATGCAAACCCACACATTATGAAGAACAATCTGAAATACGAAGGTTTGATCAAGAATATAAAAATGATACTAGTAAACTCAATTTAGAAACGCAAGATGTACTTGGAGGTACTATTGCAATAGAAAAGGAAAAATTAGAGGGGGAGAAGTCTACGGATGAGAAAGATAAGAGTGAAAATGAATCTGTCCCATCTCAAGTTCCTTCAACAGAAATGACAAAAGATACTGCACAACCTGAGGTAGAACAATTGGAACAATTATTAATCACTATTATGGAATCAGAATTTAATAATGCATCAACGAAGGAGCATGATGTACAGAAGGATGAGGAAGGGAAGGAAAGTATGGAGGAAAGTGCTTCAGTTCATGCGGACGAGGAAATAACTCCGAATATAATAGATGTGATTTCAAACTCTCATGGCAGTGATATCAAGGAATGTAATATAGAAATGGAAATTACGGAAGAACCAAAAATATGTGTAGAAGACAAATCAGACAAAAGTTATATTTTATATCATTACAAGGACAGTTTATCTGCTCCACCCTCGCCAGCAATACGAAAGAAGTTTACTCGAACATATTCAGTTCGTTCAGAATTTGGATCAAACGATAATCTTAGTGTTTATCCTGTCGGATTTGATGCTACTACATTGCAAGACGAAGAGGACGACGACGAAAAGAACATGACAGAAGATAATTTTGATGAAGCAGACATGGAAATAGAAGCAATACCTAGTCCTCATACACCTTTCATGAAGTATGGTGAAAGTGCAGATGGTGTTAGATCCCATACTCCATTGTCTGCTATTAGTGGTATATCAGTACTAAGAGTTCGAAAAGATTTAAGCAAACCTTGTTCTCCTGCATCTGCACATTCATTTTGTCATATAGATGGTGATAGTTTGAGCCACGATGATGAAAGTAACGATTTAAGAGAAATTACAATGGAGAAAGATCCTATTAGTTGTCCACAAATTGAAGAAGAATTGAAAGTTGATAAATATGAAGAGAATGTATGTGAAAATGTGGAGAAGAAGGGTAATAATTCAAATCATGTGTATCATCAATCTGTAATAACAGAGCATGTTAGCTTATTTCCACCAATTCATTCTCAACAACCTGTTTTAATACAGGATTCTTATCCATTACCAAATAACAAAAATCATAATCTTTTAAATTTATCAGAATCGATTAATCCAACTACAAGCACTGAATCAAAGAATTATCATTGTAGTAAATCAATTATTCAAAAACAGTCAATGGAACTTCTTAATATAAATGAGGATGCTCATGCTGGTCCAATGAATGTTTTTGAGTTTGATGGACTTCAAATTTTAGTTCCTAGTACATTTATAAGTGAATCATCACAAAAAGCAGTGAGTGCAACTAGCCAGCAATCTATGGCAAGTAGCGAGGGAGGTGCAGGTATTGACGAAGAAGTCAAAAGTGTTAATATGCGTGCTGACGAAACTATGCCACCCAGAGGTGAATTATCAGAACAAGAAAGTAATGGCTGTACAGAACAGTCCGCTTGGCAGGTTTATATGGGCCAAGAATCTTCAAGAATGTCAACTTCTTATGATCTAATGGCAAGGGAAAGTTGGGAAGAATCAGAAGGATCGGACAATGAAATTAGTGGTCCATTGTTAGATAGTCGATCTTTAGCTACGCATTTTACATCTAGCTTATTCTTAGATCGTGATAGAAAAACGCCTACAAAAAGGACATTTAAATGTTCACATTGTCCAGAGGTTTTTGACTGTCCTAAAGAACGTAGAGTCCATAGTACAATGGTGCACAAAGAACCTGGACCTAGCGGTAGTAGAGATGCAACAGAACAACCAGAAGTAAAAGATATAAAATTATTAGACGGGCGTATGAATGTGTTTGATGATATTTTTGTACCAGGCTTACATGTGCAACAAATGTATCATCAACAGCCATTGTTACATCAACTCCAACCGCCACAACCAGATTTAGCAAAAATAGAAACCGATCAGAAAGGTGAAAATTTGACAATTCCTTCGACAGTAGAGGTATCTTGTGCATTATGCAATCAACGATTTAATAGTGAAAAAGCTTTACAGTTACATCATAAGAGAATGCATATAGTTGAAGTATCGAAACGTATTCGTGAACAGGCAAAATGCGTAATATGCAACGAAGAATTCCCATCTGTTGTATTGTTTAATGCTCACTTAAAAATACATCCGTTAGAATGTGGACAATGCGGAAAATACTTTTATAGAAAGCAAAATTATAAATTACACATGAAACGTCATTTAGGAATCAAGCCCTTCCCTTGTACACTATGTGATAAGGCATTTTTAACTAAACAAAAATTAGATGAACATACTAATGGACATACAGGTAATGCCCCTGTAAAGTGTAATTTGTGTAATGAAACTTTTCGTAGATATTCAAATTTAACTCAGCACAAGAATAGACATCATCTTAATATTAAAAAGAAATTGAAAGACTATATATGCCAATGTGGAGAGATATTCCATACGAAGAAAAAATTAGCATGGCATAAAGAGACACATGATGAAAAACCTAAAGCATGCACATATTGTAATGAAAGATTTATACATATGGCTAGTCTTACACGTCATATGCGTCGTGCTCACAATAGGAGATTTGTTCCTGATGCTCAAAGAGAAAATGAAAATGTGGAGTGTCCAATATGTAAATGTATTTATTTGCGATCATCATTAGCCGTTCACATGCGTGTCCATAATGGTGAAAAACCCTATGAATGTCAGGTTTGTTCCAAGGCTTTTAGTACGAAATGGAATTTACAATTGCACAAGTGGACTCATGCAGCACGTAGCACGAAACCATTTAAGTGCAACCAGTGCAGCGCTGCATTTTATCGACACAGTGATTATACAGCTCATATGAATTCTCATCGGAATGTACGTCCATATACGTGTAATTACTGTGGAGCTCAGTTTATACGAAAGTATAACTGTTTAAGACATGTAAAAGAACACGAGGAGAATAAGGCATACACATGTGACGTTTGCAACAAAACTTTTCATAGGTCATATTATCTAAAAGAACATTTAAGAGTGCATTCAGGAGCAAGACCGTACACATGTCACATCTGTGGGAAATCAAGTGGTACGAAATCTAATCACAATAAGCATGTAAGAATTCATCATGCCCGAGAACCTGTAAATACTGAAAACTAA
- Protein Sequence
- MDLGIVGNATGASGGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASSTTSQQTQQLPSPTSVPPVPSSIQSPQNTPQHIQQTTAHVSAQSPYPIGPIFECPPIGTMMPPQFASFSYQQFVNNGTMMIPQYAMAPQTNQMMQMLYNPYGMYQQQQIPTVQMISPVAAIPNTTRIRPVVTMAGETNNRTTITVPVNSSEPKQILPEILPEPEVENEQDLPDINFPASPEVANENTSMQQDGNENSRIQIEHRGQQIQNPTIQDQSSVQHEYNSIPRSLTIACNIENEDDDNAESVLPDIDERETAHIVASVVQCKPTHYEEQSEIRRFDQEYKNDTSKLNLETQDVLGGTIAIEKEKLEGEKSTDEKDKSENESVPSQVPSTEMTKDTAQPEVEQLEQLLITIMESEFNNASTKEHDVQKDEEGKESMEESASVHADEEITPNIIDVISNSHGSDIKECNIEMEITEEPKICVEDKSDKSYILYHYKDSLSAPPSPAIRKKFTRTYSVRSEFGSNDNLSVYPVGFDATTLQDEEDDDEKNMTEDNFDEADMEIEAIPSPHTPFMKYGESADGVRSHTPLSAISGISVLRVRKDLSKPCSPASAHSFCHIDGDSLSHDDESNDLREITMEKDPISCPQIEEELKVDKYEENVCENVEKKGNNSNHVYHQSVITEHVSLFPPIHSQQPVLIQDSYPLPNNKNHNLLNLSESINPTTSTESKNYHCSKSIIQKQSMELLNINEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSATSQQSMASSEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEQSAWQVYMGQESSRMSTSYDLMARESWEESEGSDNEISGPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSHCPEVFDCPKERRVHSTMVHKEPGPSGSRDATEQPEVKDIKLLDGRMNVFDDIFVPGLHVQQMYHQQPLLHQLQPPQPDLAKIETDQKGENLTIPSTVEVSCALCNQRFNSEKALQLHHKRMHIVEVSKRIREQAKCVICNEEFPSVVLFNAHLKIHPLECGQCGKYFYRKQNYKLHMKRHLGIKPFPCTLCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICQCGEIFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGEKPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSGTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01514983;
- 90% Identity
- iTF_01514983;
- 80% Identity
- -