Basic Information

Insect: Vespa crabro
Gene Symbol: salm
Assembly: GCA_025728115.1
Location: JAITYU010018697.1:113-8954[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.3e-06 0.0003 20.8 0.9 1 23 385 407 385 407 0.98

2 9 8.4e-06 0.0006 19.8 2.1 1 23 413 435 413 435 0.98

3 9 0.053 3.8 7.9 3.8 2 23 800 821 799 821 0.98

4 9 3.7e-08 2.6e-06 27.3 0.6 1 23 827 849 827 849 0.97

5 9 5.1e-05 0.0037 17.4 2.6 1 23 859 881 859 881 0.98

6 9 0.0018 0.13 12.5 1.9 2 23 1200 1221 1199 1221 0.97

7 9 0.027 2 8.8 0.6 1 13 1227 1239 1227 1241 0.92

8 9 4.9e-07 3.5e-05 23.7 2.1 3 23 1431 1451 1429 1451 0.96

9 9 1.7e-07 1.2e-05 25.2 0.9 1 23 1457 1479 1457 1479 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.3e-06	0.0003	20.8	0.9	1	23	385	407	385	407	0.98
2	9	8.4e-06	0.0006	19.8	2.1	1	23	413	435	413	435	0.98
3	9	0.053	3.8	7.9	3.8	2	23	800	821	799	821	0.98
4	9	3.7e-08	2.6e-06	27.3	0.6	1	23	827	849	827	849	0.97
5	9	5.1e-05	0.0037	17.4	2.6	1	23	859	881	859	881	0.98
6	9	0.0018	0.13	12.5	1.9	2	23	1200	1221	1199	1221	0.97
7	9	0.027	2	8.8	0.6	1	13	1227	1239	1227	1241	0.92
8	9	4.9e-07	3.5e-05	23.7	2.1	3	23	1431	1451	1429	1451	0.96
9	9	1.7e-07	1.2e-05	25.2	0.9	1	23	1457	1479	1457	1479	0.98

Sequence Information

Coding Sequence: ATGCAGCTCATGCGATGGAGCATAACGCGTCGCCTGGAGTGTCGAGGCATTAGGCAATCTCAGGAGAAAAACTGCCAACCAACGACAAGGATTTATTCCAGCCGATCTTCCGGAGAGGAAAATGATTTCATATCGGACGGCGAGGAGAGTGGCGGCGGTGGAGGAGGAGACGAAGCGGTTGATCTTACAGCGGCTCGAACTCATCACGGAGATGAGGATGAGAAGGATCAAGAGGATCCTTTGGAGGAAGATGAGGAAGGCGTCGACGAGCAAGACGAACAGGACGAGGACGAAGAAGGCTCGCGAAAGCAAATGCACCATCGGCAGGACGCGGAAAACAATAACAACTTCGTCGAGGGTGGAGCGAGTAGCGGGATCTTTCCACCGGCTGGTACTAGTCACGTCACACTCGAAGCCCTTCAAAATACGAAAGTGGCCGTCGCTCAATTTGCGGCCACTGCACTCGCCGGTGGTGCGGACAGCGAGGCAGCTCTACAAGACTTGGCCCTCTTGCAAAGTACGCTATACACGCTTCAACATCAGCAGGTTTTTCAATTGCAGCTGATAAGTCAGCTGCAACAACAATTATCTATTACTCATGGCCAATCCGTGCCACAATCGTCGACAGCTGAGCCACCCAATAGCAAGGAAGCTTCGCCGTCTCCTGTCCTACATCCAAAGGCATTGTCTACATTGACCTCGCCACCTTCCTGTCGATCACCCAGCAGCAGTCATCGTCAACAAAGCTCGCCGGCGCCGGCAACGCCTAATCTACCCCAAGAACGGCCTACACCTAGCAGCAGTGCTTCTCCTCTGAATTTGCCGCTGCCAGCTACGCCTAACGTCTCCTCGAGCATACCAACGACGAGTAACAATAGCAATCTAGCGTTGTCTCATCAGATGCCGCCGCTATGCTCGATAAGCTCGTCCTTGGCGTCCTCGATAATAACCAATACGGATCCACCGCCGCTTCACGAACCCAACACCTTGGAAATGCTACAGAAACGAGCGCAAGAGGTGCTGGACAATGCCAGTCAAGGACTATTGGCTAATAACCTCGCGGACGAGCTCGCCTTCAGGGGTGGCAAAGGTTCTCGGCTCTCGCCTTACGACTCGAAATCAGGTGGCAGCCGGGGAGAACATTTCTTCAAGCACCGATGTCGTTActgcggcaaggttttcggcagcgactcggccctacagatccacatacgatcccatacaggtgagcgaccctttaaatgcaacgtctgcggcagccgattcaccacgaagggaaacctgaaggtccacttccagagacacacggCTAAATTTCCGCACGTTAAAATGAACCCAAATCCCGTCCCCGAGCATCTCGACAAGTATCATCCGCCTCTCCTTCAGCAGATAGCCTCGGGTCAGAGGCCGATGCCGTCTCCGCCACCTCCGCCTCCTTCGCATCATCCCTCGTTTCATCCAGCGGCTACGGCCCACGGATTTCTTCCTCCTCAACCACCTCTGCCACTCAGTCTCGCCTTACCCGGAATGCCACCCCTTTACCGGTCTCCCATTATTAATCATCGCGACGACCAAGAGTTACCGGAAAACTTGAGTAAACCCGTAACTACGGTACCGACGGCCACCTCGCCCCTCTCCCCAGCTGCTCTCTCCAACTCCCACCATTCCTCTTTCCACGATAATCATCAACAACAGCAGCAAAAGCAACAGCTAGAGCAAGAGGAAATCAAAATGGAACAGCGTTCGCCTCTTCAGGAACAATATCAGCAACGACCGACTAGTAGGGACGGTACTGATAGAATAACGCCGAAGAAAGAACCTGAGGATACCGAGGAACCAGTGGAAGAGGAGACCGAAGATTTTGAAGAAACAAGGCGATATCTCGCTTCGCCGCCTTCTTCGGCTAACCCCCCCTCGCAACCTCAAACCTATGAGGACTGTAGTATGGATAGTAAGATAAGTGGCAGATTGGAGGCCGATGGTGACATGGAGGTGGACGAGGAGACCGAGGAACAACCGGAAAATCTTTCTAGTCGAGGTACGGCCGGTCGTTTGCCTCAACAAATCGTCGCCTATCCCGGAGCATCGCCGGCCAGTAGCAGTGCAAGCAGCGGAAGCGTTCAAACGTCTTTCGCTGGGATTTTATTCCCTGGGCCACCTGGTCATCATCAAATACCACATCACACTGTCGCGAACGCGAACGTGACGCCGACCGTGTCGGCGGCCGAGATGATCGTCGACCCTGCCAAGGATCCGGCGATATATTCCAGTCTCCTTCCAAGACCCGGAAGCAACGACAATTCTTGGGAGAGTCTGATCGAAATAACGAAAACGTCGGAAACATCGAAATTGCAACAATTGGTCGATAATATCGAACACAAATTGACCGATCCAAATCAATGCGTTATTTGTCACAGAGTACTCTCTTGCAAGAGCGCCCTGCAAATGCATTATAgaacgcatacaggagaacgtccgttcaagtgtaaaatctgcgggcgagcttttaccacgaagggcaacctcaaaacccacatgggtgtacaccgtgcgaAGCCACAGCTTCGAGTGTTTCATCAATGTCCCGTTTGTCATAAGAAGTTCACGAACGCTCTCGTGCTACAGCAGCACATACGTCTGCACACGGGTGAGCCTACCGATCTCAGTTTGGAACAGATACAGGCAGACGAAGTGAACGAATTTCCCCCTGGCTATTCGCATCACCCATTAGCCTCTTTCCTACCTCAAGGATTTCCACCGATACATCCGACGAGCGCGGGTTTCTCCCTAGGATTTCCACCCTCCCGACAGCCTACCATAGaacgacaacaccagaaaaacgacgtagacgttaaggaagaaccccagcagcaacaacatcaacaacaacagcaacagcaacatcaattacatcatcatcatcaacaacaacagcagcaacaacagcagcaaagatacatggaagaacacaacgaggaagtggaagagcaagaagacgaagaggaagatcgcagggaggacgacgaaaggTGCGAGGTCAATCGCGATAGGTGTATCCCGGACACCGAGGAAGAACAGGATCACGAGAACGAGGAAAGCGAACAAAAAGAAATCTCTCTATCTACCTTCTCGACCTCTTTGGCTGCTTTGGAGAATCAAGTGCGAACGATCACGACTACGGCGACCGGCACGGCTTCGATCGTCGCGAGATCGCCTTCCTATCATCGTTACAACGGCAGCGACAAGAGCAATAGTCCTCCCACCGGTGGGGCACCCCTCGATCTCACCCCTCGAGCCTCATCGACGCCAGCCTCGGTATCATCCGCAGCGACGCCGCCACCCCAGACGACACCCCATCACGCGCATCCTTTCGGAATGTTCGCAGGCCTCTTGCAGACGGTCTCCTCCTCGCCTTCCACCAGCACCATGGGATCCTCCTCCAGCATAAACAGTGTCACTTCGATGAATACCGTCGCTCCTGGCAGCGGTGCCAGCGGTCCACTAGCCTCCCTCACTACATCGGCAGTCCTTGCTGCCACATCGACCTACAATCCGCTCGGCCTAGCTGTCGGAGGGCCAGCAGtacgtggaaacactacgtgtaatatctgctacaagacatttgcgtgcaactctgctctggagattcattatcgaagtcacacgaaggagcggccttttaaatgcagcatatgcgaccgaggattttcgacgaagAATGCTGGATCGGACGTATGCTCCTCGTGCGCGGAGCAACGAAAGCCCTTTGCCATAAAGGGCGCCCCACAAACGAATAACCGATATCAGAGCGAGGAGAGAAGAACGTCGACTAGCGGAAACGAGGAGAAACCCAAACGCAGGCGGCGGAGGCCTGAGGAACGGAAGAACCGGGGGCGGACCGGGACCGGAGGGGGGCGGGGGCTGACGTCTATCTATTCAACCGTCCGCCTGCCCCCGCTGATGCCACCCGCCCTCGGACTTCTCACCTCGGACCACGTCTTCCTGGGCAATATGAAACAGCACATGCTGACACACAAAATACGCGACATGCCACCCCATCTCTTCACCGATGCGAAACAACAACACCAACAACAAAGCCAGGATCACGAGAGTTCTAGGAGTCCTATGTGCAGCGACGATTTGAGTTTACCACCTCCACCTCCACCTCCACCACCACCACCGCCGGTACCACCGGCGTCAATCGAGTCGGCAGTACCAATGAAGAGATCTCCACCCGAGGGTGATCTTCCGGCACCAAAAAGACCACCCAgcgtgccgagtaaacacttgtgccagatttgcaataagaatttctcatcatcttcggcgctccagatccatatgagaactcatactggcgacaaaccattccgatgcaccgtctgccagaaggccttcaccaccaagggtaatttaaagGTACATATGGGAACCCATATGTGGACCAACGGAGCCTCGCGGCGAGGACGACGCATGTCGTTGGATCTGCCACCTCTGCCCATCACTCCCAAGGACTCGGAGTTCCTCCAGCGACGGCCGGATCTCTTCTATCCTTATCTACCCGCGCCATTCCTTAACGGAGTACAGCAAAAGCTGAACGAGATATCGGTGATCCAAAGTAACAACGGTTTGCCGGCACACTCGGTAGGCGCGGCAAAGTACGCAGGAATATTTGGTTCCGTGTACAGTGGAAACGGAGGAGGCTTCCCTGGGGACAAACAACCGATGGCGCCAACCAGCAACGGGCCCTTGGTCGACGGCAAACCAGCGATACCAACAGGCTCGATGCTTTTCCAAACGCCATCGCCGTCTCATTCGCCGGGTACACCTTCCTCTAACAGCGGAAATCAAAATTCGGCTAGTGTTCCGTCGTGGACGACGAGCACCGGCGACCCTCTTCAACATCATTTCGACAGAGAGCCACCAAGTAGAACAGAGAACGCAGCTACACCACCTACGGCGAGACTACCGCCACCTTCGGCCCCAAGAGGTGAAGGGCTCGCCGCGTGA
Protein Sequence: MQLMRWSITRRLECRGIRQSQEKNCQPTTRIYSSRSSGEENDFISDGEESGGGGGGDEAVDLTAARTHHGDEDEKDQEDPLEEDEEGVDEQDEQDEDEEGSRKQMHHRQDAENNNNFVEGGASSGIFPPAGTSHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHGQSVPQSSTAEPPNSKEASPSPVLHPKALSTLTSPPSCRSPSSSHRQQSSPAPATPNLPQERPTPSSSASPLNLPLPATPNVSSSIPTTSNNSNLALSHQMPPLCSISSSLASSIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGGKGSRLSPYDSKSGGSRGEHFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASGQRPMPSPPPPPPSHHPSFHPAATAHGFLPPQPPLPLSLALPGMPPLYRSPIINHRDDQELPENLSKPVTTVPTATSPLSPAALSNSHHSSFHDNHQQQQQKQQLEQEEIKMEQRSPLQEQYQQRPTSRDGTDRITPKKEPEDTEEPVEEETEDFEETRRYLASPPSSANPPSQPQTYEDCSMDSKISGRLEADGDMEVDEETEEQPENLSSRGTAGRLPQQIVAYPGASPASSSASSGSVQTSFAGILFPGPPGHHQIPHHTVANANVTPTVSAAEMIVDPAKDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPQLRVFHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSLEQIQADEVNEFPPGYSHHPLASFLPQGFPPIHPTSAGFSLGFPPSRQPTIERQHQKNDVDVKEEPQQQQHQQQQQQQHQLHHHHQQQQQQQQQQRYMEEHNEEVEEQEDEEEDRREDDERCEVNRDRCIPDTEEEQDHENEESEQKEISLSTFSTSLAALENQVRTITTTATGTASIVARSPSYHRYNGSDKSNSPPTGGAPLDLTPRASSTPASVSSAATPPPQTTPHHAHPFGMFAGLLQTVSSSPSTSTMGSSSSINSVTSMNTVAPGSGASGPLASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCSICDRGFSTKNAGSDVCSSCAEQRKPFAIKGAPQTNNRYQSEERRTSTSGNEEKPKRRRRRPEERKNRGRTGTGGGRGLTSIYSTVRLPPLMPPALGLLTSDHVFLGNMKQHMLTHKIRDMPPHLFTDAKQQHQQQSQDHESSRSPMCSDDLSLPPPPPPPPPPPPVPPASIESAVPMKRSPPEGDLPAPKRPPSVPSKHLCQICNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLPAHSVGAAKYAGIFGSVYSGNGGGFPGDKQPMAPTSNGPLVDGKPAIPTGSMLFQTPSPSHSPGTPSSNSGNQNSASVPSWTTSTGDPLQHHFDREPPSRTENAATPPTARLPPPSAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01233833;
90% Identity: iTF_01233833;
80% Identity: -