Basic Information

Insect
Vespa crabro
Gene Symbol
-
Assembly
GCA_025728115.1
Location
JAITYU010021187.1:388-11197[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 6.9e-06 0.00049 20.1 1.0 1 23 224 246 224 246 0.98
2 31 0.003 0.21 11.8 1.9 1 23 269 292 269 292 0.96
3 31 0.00015 0.011 15.9 0.5 2 23 299 321 298 321 0.96
4 31 0.0051 0.37 11.1 0.7 2 21 342 361 341 362 0.92
5 31 0.00023 0.016 15.3 0.1 2 23 460 481 459 481 0.96
6 31 0.0045 0.32 11.3 0.5 1 23 487 510 487 510 0.91
7 31 0.00013 0.0093 16.1 0.1 1 23 583 606 583 606 0.96
8 31 0.011 0.79 10.0 0.7 1 23 612 635 612 635 0.96
9 31 0.068 4.9 7.5 0.8 1 23 648 670 648 670 0.97
10 31 2.8e-05 0.002 18.2 0.6 3 23 715 736 713 736 0.96
11 31 0.13 9.5 6.6 3.3 2 23 799 822 798 823 0.92
12 31 6.2 4.4e+02 1.4 0.0 2 23 832 854 832 854 0.83
13 31 0.017 1.2 9.4 0.1 2 23 861 883 860 883 0.95
14 31 1.4e-05 0.001 19.1 1.2 1 23 891 913 891 913 0.98
15 31 0.41 29 5.1 0.8 3 23 948 970 946 970 0.85
16 31 0.00023 0.017 15.3 3.3 1 23 973 996 973 996 0.97
17 31 0.00042 0.03 14.5 0.3 2 23 1003 1025 1002 1025 0.96
18 31 0.001 0.072 13.3 3.9 1 21 1052 1072 1052 1073 0.95
19 31 0.003 0.21 11.8 1.8 2 23 1087 1108 1086 1109 0.93
20 31 0.49 35 4.8 1.4 1 23 1112 1135 1112 1135 0.94
21 31 0.0076 0.54 10.5 0.6 2 23 1142 1165 1141 1165 0.92
22 31 3.4 2.4e+02 2.2 0.2 2 23 1173 1195 1173 1195 0.94
23 31 4 2.9e+02 2.0 0.0 2 23 1202 1224 1201 1224 0.87
24 31 0.25 18 5.8 2.7 2 23 1233 1255 1233 1255 0.96
25 31 0.89 63 4.0 0.7 2 23 1261 1283 1261 1283 0.92
26 31 0.21 15 6.0 2.0 1 23 1345 1368 1345 1368 0.95
27 31 0.0012 0.089 13.0 2.7 1 21 1397 1417 1397 1418 0.95
28 31 0.35 25 5.3 1.9 2 23 1519 1541 1518 1541 0.94
29 31 1.6 1.2e+02 3.2 1.0 2 23 1548 1570 1547 1570 0.94
30 31 0.77 55 4.2 2.5 1 23 1581 1603 1581 1603 0.97
31 31 2.3 1.6e+02 2.7 0.1 3 21 1612 1630 1611 1631 0.94

Sequence Information

Coding Sequence
atggagtctagacaacgttatcacgagctatgtcgattgtgtgcatcttacgacgCTGTCAAGATGGATATATTCGGACAGGAGGGAAAAAATCGACAACTAGTCGACAAAATTCAGACCTGTCTACCGTTCAAGATCACAGAAAATGATCGCCTCCCAAAGTGTTTATGTTATCGCTGTATGTACAACCTGGAGAATTTTTATGACTTCAGGACAGCATGCGTCAATGCAGTGGCATTATTGGAAAGATATTTACCTCCTAGCGAATTAGCACATAATGGGGACAAAAGTAACTATATGCAGTACAGTAATGTACATTCAGAATTTTTGAAGGAGAAAGAAAATATCCCCATATTAATCCCAGAGGCTCCCATAGTAAATCCAAATGCGGCTTTAGGTACACCGCCAAGATTAAATTCCGATGGAGAAGCagataatgaaatagaagaacttcttgaaaatagtggcacggatgaagAGGCAACGATAATAGATGATTCGGATAGAAAATCTGATGAATATGAAATGGATATGGAAACGAATCCTAGCGATTTCTTAGAAATGACCCCAATGGTAACAGAAGATAATGAAGAAACGAGTTCAAAAAATATGCCTATGGTAACACAAGAATCAACAATATTCCAACATACATCGGAGCAACATGAAGTGTATGTGTGTTCGTTGTGTAACAAGGCATTCAGTTCTAAAGGACATTTGTCCCTTCATGCAAGAATTCATGTGGGTGCAGGTGATGTCATCGGTGAGAAAGTTATCACCGATGATCATACTTCCTATAAAAGGCCTTATCAATGTGATCTTTGCAACAAATCTTATTCAACGGCTAAACATCGATGGGGACATGTATCTACTACGCACAGAGGACATCCTGCCGTAACATGTGGGTATTGTTCACGCATTTATTCAACACGAACAAATCTTGAAGAACATATAAAATCACGACATGCGGGATTTCCTGCACCGTCCGAATTACTAAACCCCCTTTTCCGTTCAGAAACCAAATGTTATTGTAAAATGTGTTCCAAAATGTTCACTAGTATAGCCGATTTAAATATTCATAGTCGAATATGTATTGGACAACGAATAGAGCTTCAAGTGCAACCGGATATTAAGATTGAATCACATAATAGTAAAAGTCTGGTTGATACTTCGGATATATCGAGTATGGATACGGATGATGAACATAAGGGATTTAAAAATGCTGAAGCAAAATTAGCCAAAAATCCACAGCTTACGATATTGAAACAGGCGTTGACAAAGGGTAGTGGTTTGAAAAGAGATTTGGATGATAAAACGAGAGCGAATTGTAGTCCACAAAAAATAGCGAAAACAGATGGCTGTGAAATGCAGAAGAGGTGGTACTGCGAAATGTGTCCTCAAAGTTTTTCTTCAGTGGAAAATCTTAAAGAACACGAGATAACACATGATGCTGACAAACCTTATATTTGTATATTGTGTAAAAAAGACTTTACTTTAAAATCATCACTCAGCAGACATATCTTGGTATCGCATGGTGTAGATCCATGTCCTTTTATAGATAGTGATAAGTGTTTAAAAAGAGTAGTTCTTACGCAATCATGGGGTCAACAGATACCTATACCTATGTCCGATCAGAAAGATGCAAAGGAACCTTCGGAGTTTGCTCTGTCTCCAGAAATGAACGTAGAAAATGAAGATGAAGATCAGGAGAGGAGTAATCATGAAAATATGGTAGAAATGGAGACAGTTTTTGTATGTGAAATATGTACAAGGGATTTTAATGATAGAGCATCTTTATGGTTGCATATACGTGCGACGCATAAAGAATGCGCTGCTTTTGCTTGTGGAGTATGTTTAAAAATATGTTCTGACAATACACAACTCCTAAATCACGTTAATATGTATCACGGAGGATCAAAGTTATTAGTATCGGAACAAAGAAGGTATAGTTGCACGATATGTGGTAGACAACATGATTCACGAAAGAAATTAATTGCTCATGTATCAATACATAATGTAAATCCTGCTTATGACCCTGCAAATTTTGTACAGTTAAACAGTAATTATTATAACGAGACATTAAATGGTAATGAAGTAACTGAAAATATTTTGGAGTTTGATGGAGACGAGGGAGAAAAAATAGACTGTTATATTTGTTATAAATCATTTCCAAACGAGGATCATCTTATAAGACATCAAAGAAATGCTCATAAGTTCGAGCAAATGGCTCAGGTAGTAGATGCCATTGGTAATGGTAATCCAGCAAATATGAATGGTACTGGTAATAGGGCGCAGTATCATTTATTTTTTGTCTGCGAGCTTTGTGGTAGCTCACATCCTAGTAAATGGGAACGTTGGTTACATGTTAGTAGCACTCATAGTAACGAACCAAGTATAAAGTGCGAACGGGACGATTGTGGAAAAATATTTGCTACGAAGGCGTTACGTAACGAGCACGTACACCACCATCACTCGGTCCAAGGTCCTTCGCCAAATACTTGTGAAGTTTGCGGTAAATTATGGGGTAGCCGAGTTGATTATTGGAAGCACGTTATGGGAGTACATTCCGATACAGTGCCGCTAATATGTGGCGTTTGTCTAAAAGTATTTCCGAATGTTTTGCAACTTAAAACACATGTGCAAACTAAACATTGGCCATTGACCAATGGTGATTTTAGTTGTGACATATGCGGTAGACCATATTCAAATAAATCTAAAATGTCAAGACATAGAAAAATTCATGGATTAGAAGTCGATGGTTATGATAATAACAGTATTAACGATGCCTTGAACGAATCGTCAAAGTACGAGCACGGTGTTGTACCCCAAGAAATGGATTTAACATGTGAATTGTGTGCCGATATGAAATTTTCAAATCTGGAAAGTTTATGCAGTCATAGACGTATTGTGCACCGTCTATTTCCGTGTGATCTTTGTAACAAGTGTTACGGGAGAACATCTCATCTATGGAAACATGTAAATCGGGTACACAAAGGTCACGTAGATATAACGTGTCCTTACTGTTTGAAAACTAGCGCGTCTAAAGACCATTTAGCTGCGCACATATCCAAAATTCATAGGTACGAGTTAGATGTTAGAAAGGATAATAAAAATTCAGTAAATTTCAAATCTTCGAACGTGGAGGATGGGGTTTTACATTATTGTGAAAAATGTAATAAAGGATTTCATAAACGTTACTTACTTAGACGCCATATGAAAGGTTGTCAGAATTATCGAAAAGATCCAGGCGCATTATTGACCCGTTGCCGTGCCTGTGAAAGAATATTTAAAGATCGTGCCAGTTTACAAAAGCATATAGAAAATCATCATAGCACATACACATGCCATTTATGTAACGAAACAATTACATCTAAATTGGGTATTATGACTCATAATCGGGTTAAGCATATGGATCATCCAGATCTTACGTGTGAATATATTAGCTGTAAAAAATTATTCAGAACTAAGGAAGACTTGGAGGCACATAGGAAGGATCATAAATATCACATAACTCCTAACGTTTGCGACTTTTGTGGGGATACGGTGGAGAATAAATTGAAATTAAAAATGCACGTATTATCTTTACACAGAAATGAAATAGGAGTATCTTGCGGTGTTTGTTTAATACCTATGAAAGATCCAAAGGATTTGAAGAAACACGTTGAGGACGTACACGAAAGTGTTTTGTCCAAACCAAATACGTGTCAGGTATGCGGCAAACAATATGCATCGAAATGGAAAGCTTTCGATCATACGAAAAAATGTCATGGGAAGGTATTTAGAACGTGTAAACAATGTTTAGCTGTTTTTACCAATGACTCGGATATCAGAGATCATTATGAACACGTTCATAATATTTCCAAGGATCAATTAGCTGCATTCGAATATCGTATGGATATTGGATCTAAAGTCGACGAGTACGATGTACCAGCTGATATCGTTGTTAAGGAAGAACCGGACGATTTAGATTTCGACGAGGATTTATGCGAGGACGATTTGAATAATTCTAAACGTAGAAGATCGTTAACCGATACCTATGATTGCGAGATGTGTCCGGAAATTTTCTTGAATTGTCATACATTGGCGAAACATTATCAAAATGTTCACAATACCGATCCAATTCGTATGTTTAAAAAGATAAAGCCGGATAATAATGACAGTGGCAAAAGAAAAATGAGAAATCGAAAGAATTTCGAATGTAAAAATTGTCAAAAACAATTCTGTACGAAAACATTGTTTTGGAATCATATTAACGTATGCACCAGGCGTAACGCCTTTAACAGATTGGATATGCAAAATATTATGCCAACGTCGATTTTGGAAACACATTTAAAGAATAATAATCAAATAAAGAAGGAAGAAACTTCGTCGTTTATGAACGAATCCAATTTAAACATTCCAGATTTTAATTTATTCGAAGATATTAATTTGCAATTGTCAGGGCAAAAGCCAGTACCGAATCTTATGCCATTGTCACATATTAAACCACCTACTGCGGTTAAGTGTTCTAGAAAAGATTCTCGGAAGGTATACGATGAATCAACGAATACCGAATGCACGTGTGAAGTTTGTGGCAAACAATGGCCGGCGAAAAAACATCTCTGGCAACATCTTATTCGTTTTCATAGAGCAGAAGCTGCTGTTACGTGTGGCGTTTGTTTGAAATTATGTAAATCTTATCAAGATCTGTCCGATCATTTGAAGGCAACTCATGCTGCTATATTATCGTGCGAAGGAAATAATTTCACTTGTAAAACCTGTGGCCGTTATCACAATGCAAGAAGTAAATTATTATTACATATGAGCATTCATATTAATTACGTTGGCAATTTTTGGTGTCAAAAGTGTCAATTGAATTTTGAAAGTGAGGGCAAATTTTCAGAACATATATTAGAATGTAACAAGAAAATAGAATCCGTTAGAAGTACCATCGAGGATAATATAAAGAATGAAAACGATGAGAAGGGAAGTTTGATAGGCGATGAGACATCGGTCGTCGAGGAGGTAGAGGAAGTTGAAGATTTTGAATCGGAACCTGAGGAGGATGGCGTCACCCAGGAGGAGAGTAATAGCGAGAATACGGAAAATTCGGAAGATTCGGATAGTGCTAGTAATACCAGTACCAGTGACGAGGAGGAAGCGGAAGAGGAAAATGATTCTGAAGCCGAGTCTAGATCTAATAGTAGGGCTATAATAAGAGGGGAGGTATCGTGTAATACCGACGTAAGCGATGATACAGATTCAGAAAATTCCGTAAATTCCGCCATGATTGATAATAAAAATTTAAACGACATGAATTGCTTTATGATACATAACGAGGATAAGCAGATGAATATCGATACGAAAGACAATTTGGAAGGACAATTAACGAATCAGGAAACAGTTGGTGAAGTTAAAGAGACTAATCAAGAGGAACAACAACAACCACCACAACAACAACAGCAACCACAACAACCACAACCACAACAACCACAACCacaacaaccacaacaacaacaacaaccacaacaacaacaaccacaacaaccacaacaaccacaacaaccacaaccacaacaacaaccacaacaacaaccacaagaacaagaacaacaactacaactgcaacaacaacaacaacaactacaacaacagcagcagcagcagcaagaacatttacaactactacaacaacaacaagaacaacaacaacaacaacaagaacaacaacaacaacaacaagaacaagaacaacaacaacaagaacaagaacaagaacaacaacaacaacaagaacaacaacaacaacaagaacaacaacagcagcagcagcaagaattgaatattaaagAATCAGTGAATGTGACTAAATTGAATAATTTTCACGTCAAGGAATTACCCGAGAAAAGAAGAAGCGATTCGGATTTTACCGACGACGATGGTCCACCCATTTTGAGTCCAATTATGCCATTGTTAGAACAGGAACAAACGCAACAACACAATAATAATCCGATAGATGATATGAGACACAAGCTTAGTCCTATGATACCGTTGACAATGAACGACGAAAAGGAATTAGAAATGTGTGAATTTTCTGAAAATGGTAACGATGTTGAAAGGGGTACGACGTCATCCATGTCAAATCCAATAAATTATTACGAAAATACGGATAACGATAAGGACATGAACGCTAATGCGTCTAACCATAATTTAGAATATGATTGCGATGATTTTGAAAATATCGATAAcgatgaggaggaggaagaggaggaggaggaggtggaagaggaggaggaggaggaggaagagagggatgaggaggagagagaggtggaggagagggaggatggggagggggaggacgaggaggaggaagaggaggaggatgaggaggaggaggaggaggaggaggaggaaggtagtatatcggccaacGAGGATGGACAAATGGAAATAGATGAACAAAATGTGGATTGTAATTCGGTAAATAGATATGAAAAATTAGAAATTAACGAATGTATCAATGATTCCGAGATTGATTCTTACGAGGAAAATTTAGACGAAGAGATTAAATTTGACAATGAGACTAGAGATAACGATGTACAAATTCATAATCTGGATGGTGCTGTATTGATGGTAGCTAACGATTCGGAAGGTAATCAGATTTTAATTCAACAAAATGTATTAACAATAGGAAACGAGGATTCTAATACTGGTGCGACTGAATATATTTATCAAGATACGAACGAGTACGAGATAGAAGAGTATGGTATAGCACAGCATGAAAATAATTCAACGATACAGTCTGACGATATTCAAGAGATGGCATATGTTCAGGATATATCAGAAAATGAGGATAGCATCGAAGAGGTTGTAGAAATACATGATATGGAGGAACAAAgtgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgattgtgacgatgatgatgatgacgatgatgatgatgacgatgacgattatgattatgatgatgatgatgatgataatgataatgatgatgacgatgatgatgatgatgatgatgataatgatgatgatgacggtgattatgatgatgatgatgatggtggtggtgatggtgatggagatggtgaaggatga
Protein Sequence
MESRQRYHELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKITENDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERYLPPSELAHNGDKSNYMQYSNVHSEFLKEKENIPILIPEAPIVNPNAALGTPPRLNSDGEADNEIEELLENSGTDEEATIIDDSDRKSDEYEMDMETNPSDFLEMTPMVTEDNEETSSKNMPMVTQESTIFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGFPAPSELLNPLFRSETKCYCKMCSKMFTSIADLNIHSRICIGQRIELQVQPDIKIESHNSKSLVDTSDISSMDTDDEHKGFKNAEAKLAKNPQLTILKQALTKGSGLKRDLDDKTRANCSPQKIAKTDGCEMQKRWYCEMCPQSFSSVENLKEHEITHDADKPYICILCKKDFTLKSSLSRHILVSHGVDPCPFIDSDKCLKRVVLTQSWGQQIPIPMSDQKDAKEPSEFALSPEMNVENEDEDQERSNHENMVEMETVFVCEICTRDFNDRASLWLHIRATHKECAAFACGVCLKICSDNTQLLNHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLIAHVSIHNVNPAYDPANFVQLNSNYYNETLNGNEVTENILEFDGDEGEKIDCYICYKSFPNEDHLIRHQRNAHKFEQMAQVVDAIGNGNPANMNGTGNRAQYHLFFVCELCGSSHPSKWERWLHVSSTHSNEPSIKCERDDCGKIFATKALRNEHVHHHHSVQGPSPNTCEVCGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVLQLKTHVQTKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLEVDGYDNNSINDALNESSKYEHGVVPQEMDLTCELCADMKFSNLESLCSHRRIVHRLFPCDLCNKCYGRTSHLWKHVNRVHKGHVDITCPYCLKTSASKDHLAAHISKIHRYELDVRKDNKNSVNFKSSNVEDGVLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRVKHMDHPDLTCEYISCKKLFRTKEDLEAHRKDHKYHITPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHESVLSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTNDSDIRDHYEHVHNISKDQLAAFEYRMDIGSKVDEYDVPADIVVKEEPDDLDFDEDLCEDDLNNSKRRRSLTDTYDCEMCPEIFLNCHTLAKHYQNVHNTDPIRMFKKIKPDNNDSGKRKMRNRKNFECKNCQKQFCTKTLFWNHINVCTRRNAFNRLDMQNIMPTSILETHLKNNNQIKKEETSSFMNESNLNIPDFNLFEDINLQLSGQKPVPNLMPLSHIKPPTAVKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKSYQDLSDHLKATHAAILSCEGNNFTCKTCGRYHNARSKLLLHMSIHINYVGNFWCQKCQLNFESEGKFSEHILECNKKIESVRSTIEDNIKNENDEKGSLIGDETSVVEEVEEVEDFESEPEEDGVTQEESNSENTENSEDSDSASNTSTSDEEEAEEENDSEAESRSNSRAIIRGEVSCNTDVSDDTDSENSVNSAMIDNKNLNDMNCFMIHNEDKQMNIDTKDNLEGQLTNQETVGEVKETNQEEQQQPPQQQQQPQQPQPQQPQPQQPQQQQQPQQQQPQQPQQPQQPQPQQQPQQQPQEQEQQLQLQQQQQQLQQQQQQQQEHLQLLQQQQEQQQQQQEQQQQQQEQEQQQQEQEQEQQQQQEQQQQQEQQQQQQQELNIKESVNVTKLNNFHVKELPEKRRSDSDFTDDDGPPILSPIMPLLEQEQTQQHNNNPIDDMRHKLSPMIPLTMNDEKELEMCEFSENGNDVERGTTSSMSNPINYYENTDNDKDMNANASNHNLEYDCDDFENIDNDEEEEEEEEEVEEEEEEEEERDEEEREVEEREDGEGEDEEEEEEEDEEEEEEEEEEGSISANEDGQMEIDEQNVDCNSVNRYEKLEINECINDSEIDSYEENLDEEIKFDNETRDNDVQIHNLDGAVLMVANDSEGNQILIQQNVLTIGNEDSNTGATEYIYQDTNEYEIEEYGIAQHENNSTIQSDDIQEMAYVQDISENEDSIEEVVEIHDMEEQSDDDDDDDDDDDDDDDDDCDDDDDDDDDDDDDDYDYDDDDDDNDNDDDDDDDDDDDNDDDDGDYDDDDDGGGDGDGDGEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01512963;
90% Identity
iTF_01512963;
80% Identity
-