Basic Information

Insect: Vespa crabro
Gene Symbol: -
Assembly: GCA_025728115.1
Location: JAITYU010018344.1:19346-21424[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.042 3 8.2 0.5 2 23 89 110 88 110 0.93

2 11 0.27 20 5.6 4.1 2 19 179 196 178 200 0.85

3 11 7.7e-06 0.00055 19.9 2.0 1 23 337 359 337 359 0.98

4 11 1.2e-06 8.8e-05 22.5 2.3 1 23 365 387 365 387 0.99

5 11 6.5e-07 4.6e-05 23.3 2.9 1 23 393 415 393 415 0.96

6 11 0.00011 0.0078 16.3 2.6 1 23 431 453 431 453 0.97

7 11 4.1e-08 2.9e-06 27.1 0.6 2 23 460 481 459 481 0.97

8 11 3.3e-07 2.4e-05 24.2 4.8 1 23 487 509 487 509 0.98

9 11 1.4e-07 1e-05 25.4 2.6 1 23 515 537 515 537 0.96

10 11 4.7e-05 0.0034 17.5 5.2 1 23 543 565 543 565 0.97

11 11 3.1e-07 2.2e-05 24.3 2.6 1 23 571 593 571 593 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.042	3	8.2	0.5	2	23	89	110	88	110	0.93
2	11	0.27	20	5.6	4.1	2	19	179	196	178	200	0.85
3	11	7.7e-06	0.00055	19.9	2.0	1	23	337	359	337	359	0.98
4	11	1.2e-06	8.8e-05	22.5	2.3	1	23	365	387	365	387	0.99
5	11	6.5e-07	4.6e-05	23.3	2.9	1	23	393	415	393	415	0.96
6	11	0.00011	0.0078	16.3	2.6	1	23	431	453	431	453	0.97
7	11	4.1e-08	2.9e-06	27.1	0.6	2	23	460	481	459	481	0.97
8	11	3.3e-07	2.4e-05	24.2	4.8	1	23	487	509	487	509	0.98
9	11	1.4e-07	1e-05	25.4	2.6	1	23	515	537	515	537	0.96
10	11	4.7e-05	0.0034	17.5	5.2	1	23	543	565	543	565	0.97
11	11	3.1e-07	2.2e-05	24.3	2.6	1	23	571	593	571	593	0.99

Sequence Information

Coding Sequence: ATGTTCATAGTAACTAAAGAAATCGATGGAGAAAATATCAGCAAATTGTGTCgagatggattaccagaaaagatgtgtgaccgatgtgtcaccagagcAGAATCTGCTCTTTTGTACAGAGAACAATGTAGAGCAGCCGATAGGGCTTTAAGACAGGCTGCTTTAAAGGTCTCTGGTTTAACTTCCTATGCAACTGTATCAGGCTGCAAATTGTATCAGCAGAGTCAAGGTTTTATGCCAGTACAAAATTCACACAAAACTTTAAAATGTATAGAATGCGGAGCTGTGTTTATGAGTTATCAAGAATTGTGTGCTCATAATAGATTGCATTTACCTTTCGTACAAGAAAATATCCCTGTAGAACATATGCACATCATAGAGTCTCAAAATACATATCTTAATTTCAGTCATTTAAATTCTAATCTCCCTAACGATGGCATACAGAATACTCAATTGTCACCATTAATTACGTCTAATGTAATGCATATGATGTCAGTTAATGAAGATGGTTCTAGTAGAGCTGCTTGCGCGCTCCATTGTTCTCTCTGTAATCATACATTTACTAATAGAACGCAATTAATATGTCATAATATAGCTCATACTACGGAAAATATAGATATATCTTGTGACAATGACAATATTGATATTTGCGAAAATTCTAATCAACTACCGCAGAATTTGAGCTACGAAAGATCTATGAATTCTGTCGATAATTCGATTGAAAATTTATCTTATCAAAGACCTAACGTGGATAATAATGAAATGCAAAATTTAAACTTTCCGGATAATATTCATCTCGATGATGTTCGAGAAAATGGTACGCAACGCGTTCAAAATATAATGCATTCAGAAAATGATGTCACAAATGTGCATAATTTACAATTTACCAAAGCACCAAATGTTGAAACAGGTAGACATATCTTAAATAACTATCAAGTTTGTTCATCCGATTCTAATTATAAGGAAAAACTTGATGCAAAGGAATTAACTAATTCGCATTCAAAAAAATACAAATGTAAATTATGCACTAAACTATTTAGTCAAAAATCCAAATTACTTGCTCATCAGATATCTCACAGCGATCAAAGACCATATAAGTGTCACAGTTGTGAAAAAGCTTATGCATCTAAAAGTAAATTGAATGCGCATATGAGATTACATACTAAAAAGAATGTACATTTTTGCAAATTATGTAACAAAGTATTTACATATCCTTCTTATCTTGAAGAACATATGAAAACTCATAACAAGATATATAGTGATTCTAAAAAGGTATTGCAACTTGAGGGTTTCCAATGTAATACGTGCAAGAAACGATTTAGATTAATAAAAAATTTAAAAGCTCATGAAAAATTACATACTGGAAAAGATCTTATTCAATGTGAGATATGCGATAAACGATTTAGTCAAAATTACAATTTAAAAGTACATTTACAAATGCACAAATCAATAAAGATGCATAAATGTGAATATTGTAACAAATGTTTCACTCAAAAGGGTAATTTGGTGGAACATTTAAGAATTCATACGAAGGTAAAACCATTTGAATGTAAATTATGTGGCAAAACATTTTCTCAATCAAGTCATCTTAAAAATCACGAGGCTTCGCACGTTTCCCTGAGACAACATCAATGTCGATTATGTGGGAAACGTTTTAAACTGGCGAATCATTTAAAGAGACATTTAAATCTACATACAGGAACAAAAGCATACAAGTGTGAACAATGCAATCAAATGTTTTCTCAAGCTTTTAGTTTAACTAGACATATGAAGAGGCACAGTGATTCACACATTTAA
Protein Sequence: MFIVTKEIDGENISKLCRDGLPEKMCDRCVTRAESALLYREQCRAADRALRQAALKVSGLTSYATVSGCKLYQQSQGFMPVQNSHKTLKCIECGAVFMSYQELCAHNRLHLPFVQENIPVEHMHIIESQNTYLNFSHLNSNLPNDGIQNTQLSPLITSNVMHMMSVNEDGSSRAACALHCSLCNHTFTNRTQLICHNIAHTTENIDISCDNDNIDICENSNQLPQNLSYERSMNSVDNSIENLSYQRPNVDNNEMQNLNFPDNIHLDDVRENGTQRVQNIMHSENDVTNVHNLQFTKAPNVETGRHILNNYQVCSSDSNYKEKLDAKELTNSHSKKYKCKLCTKLFSQKSKLLAHQISHSDQRPYKCHSCEKAYASKSKLNAHMRLHTKKNVHFCKLCNKVFTYPSYLEEHMKTHNKIYSDSKKVLQLEGFQCNTCKKRFRLIKNLKAHEKLHTGKDLIQCEICDKRFSQNYNLKVHLQMHKSIKMHKCEYCNKCFTQKGNLVEHLRIHTKVKPFECKLCGKTFSQSSHLKNHEASHVSLRQHQCRLCGKRFKLANHLKRHLNLHTGTKAYKCEQCNQMFSQAFSLTRHMKRHSDSHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01090141;
90% Identity: iTF_01513624;
80% Identity: -