Vcra008581.2
Basic Information
- Insect
- Vespa crabro
- Gene Symbol
- kn
- Assembly
- GCA_025728115.1
- Location
- JAITYU010016383.1:13615-21055[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-35 5e-32 110.6 0.0 205 271 1 79 1 80 0.98 2 2 1.4e-48 6.7e-45 153.1 12.5 292 564 76 334 75 345 0.64
Sequence Information
- Coding Sequence
- ATGAGACGATTTCAGGTGATCATATCGACGCAAGTAGGAGTGGAAGGTCCATGGTTAGCGGTATCCGATAACATGTTTGTCCACAACAATAGTAAACACGGACGCAGAGCGAAACGATTGGACCCCAGTGATCCTGGCGAGTACAACAGTTTGTATCAACCCATACCACTTCAGACACCCTGCATAAAGGCGATATCGCCGAACGAGGGTTGGACGACGGGTGGATCAACCATAATTACTCCGAACGCGATCAGGGTACAGACGCCGCATAGAGAGATACCGGGTGTTGTCGAAGTAACGCTTTCATACAAAAGCAAACAATTTTCTTTAAACGAGCCAACGATCGACTATGGTTTTCAAAGGTTACAAAAATTAATTCCACGACATCCAGGGGATCCGGAAAAATTGCCAAAAGAAATAATATTGAAACGAGCAGCGGATTTAGCGGAAGCATTGTACAGTATGCCAAGGAGCGGAAACGCGGGTATAGCGGGGGCGTCGAGGAGTCCAGGAGCGGGACACCCACCGGCGCCCCCGACTTCGAGTTCGGCGACAGCGTTCAACTCGTATACAGGACAACTCGCCGTGACGGTGCAAGAGAATGGTAGTGCTACAAAGTGGACGGACGACGGTAGTTCCGTGACGACAGGAGCCGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGTAGGGGGCAGTGTAGGTGGTAGCGTCGGGGGTACGGCCGATGCTTACAGACAAAGCAGCAGCGCCAGTCCGCGAGGGGTTGTAACCGGTGGTGGTTATTGCGGAAGTTCGgctagcacgccgcacagccacagcaccaacggcagctattccgttgcgaatccatacactggaagtccgactctttacacgtcgccgcacgaacaatacggCATTTTCTATACGTCCGGGGACGGGAGTGCGTTCGCCCCTGTAGTACGACCACCGACCACCTCAGTCCCACCGCACTGGTCCACACAGCACCACCTCGCTACAGCCGCCCAGTAA
- Protein Sequence
- MRRFQVIISTQVGVEGPWLAVSDNMFVHNNSKHGRRAKRLDPSDPGEYNSLYQPIPLQTPCIKAISPNEGWTTGGSTIITPNAIRVQTPHREIPGVVEVTLSYKSKQFSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSGNAGIAGASRSPGAGHPPAPPTSSSATAFNSYTGQLAVTVQENGSATKWTDDGSSVTTGAAXXXXXXXXXXXXXXXXXXSVGGSVGGSVGGTADAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTNGSYSVANPYTGSPTLYTSPHEQYGIFYTSGDGSAFAPVVRPPTTSVPPHWSTQHHLATAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070145;
- 90% Identity
- iTF_01511939;
- 80% Identity
- iTF_01511939;