Vnig019228.1
Basic Information
- Insect
- Venustoraphidia nigricollis
- Gene Symbol
- gata4
- Assembly
- GCA_034508555.1
- Location
- JAVRKA010000086.1:1220833-1231659[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-18 1.1e-14 54.3 3.2 1 34 65 97 65 99 0.97 2 2 9.7e-21 6.5e-17 61.4 4.8 1 35 119 152 119 153 0.98
Sequence Information
- Coding Sequence
- ATGACTGCTGATATCCCTCTTCCTACATCTTCATATTCCATGTTCAGCGGATCCTTGTCACCGATAATAGATAGACGCTTATCTCTTTCGAGTCAGTTACTAGTTATTATGACAAATGTTAACTATAATGAATATTTGTTGTTCTCCCATAAAACAGTCGAGGCTGCTGAATATTTCTCTGAGGGTCGTGAGTGTGTGAACTGCGGCGCTATTTCGACGCCGCTATGGCGTCGCGACGGCACCGGCCATTACCTCTGCAACGCATGCGGCCTGTACCACAAGATGAACGGCATGAATAGGCCGCTTGTCAAACAGCCGCGTCGATTGTCAGCATCTAGACGCGTTGGATTGTCTTGTTCCAATTGCCATACAACAACTACGTCGTTATGGCGTCGAAATCAAGTAGGAGAACCAGTGTGCAATGCCTGTGGTTTATATTACAAACTACACGGCGTCAACCGACCAATGGCCATGAAAAAAGATAGTATccagacgAGAAAAAGAAAACCGAAAGGTGgcagtaaaaatgaaaatgcaaATTCCGGATCTGCTGGGAATTTAGTATCAAGCTCTCTTAATTCCAATGTAGGATCTATTAAACTTGAAAATCCAACTTCTTTAGaaaattataatttacatcaCCATAGTTCGTCGTCGGCATATACATCGATGTACAATCCTCCTGTGTCAAGTCATTTGAGCCAGCATCAGGGTCAGGCTCACAGTCAAAGAATTACGTCGCCGTATCATTCCGGTGCACATTCACCGACCAGTATAGCGCATTATGTCAACAACTACGGCGATTTCATCACAGTTTCACAGACGCAGTCGATATCACCGAAAACCGAAGTCGACAATTCACCGACCAGGTCGCCGGGATCTGATTGTTCGCCGCATATTGTTAATTTGGGCGGCAATATAAACAACAACAATAGCAAGACCATTATGGGAAATGGTGATGCTAATTCACAACTTAATATGGAAAGACCTACTGTTGTTTCCATGTCttcgtaa
- Protein Sequence
- MTADIPLPTSSYSMFSGSLSPIIDRRLSLSSQLLVIMTNVNYNEYLLFSHKTVEAAEYFSEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLSCSNCHTTTTSLWRRNQVGEPVCNACGLYYKLHGVNRPMAMKKDSIQTRKRKPKGGSKNENANSGSAGNLVSSSLNSNVGSIKLENPTSLENYNLHHHSSSSAYTSMYNPPVSSHLSQHQGQAHSQRITSPYHSGAHSPTSIAHYVNNYGDFITVSQTQSISPKTEVDNSPTRSPGSDCSPHIVNLGGNINNNNSKTIMGNGDANSQLNMERPTVVSMSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01531637;
- 90% Identity
- iTF_01531637;
- 80% Identity
- -