Basic Information

Insect: Venustoraphidia nigricollis
Gene Symbol: Hivep3
Assembly: GCA_034508555.1
Location: JAVRKA010000018.1:2489305-2506176[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.002 0.056 14.5 0.8 1 23 315 337 315 337 0.98

2 8 8.7e-05 0.0024 18.8 2.9 1 23 343 367 343 367 0.91

3 8 0.022 0.6 11.2 0.6 1 21 586 606 586 607 0.95

4 8 1.7e-05 0.00046 21.0 2.1 1 23 1425 1447 1425 1447 0.99

5 8 5.8e-05 0.0016 19.3 3.4 1 23 1453 1477 1453 1477 0.92

6 8 0.0012 0.033 15.2 1.7 2 23 2020 2041 2019 2041 0.97

7 8 0.00099 0.027 15.5 2.4 1 23 2048 2072 2048 2072 0.92

8 8 0.0032 0.089 13.8 2.7 1 23 2090 2114 2090 2114 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.002	0.056	14.5	0.8	1	23	315	337	315	337	0.98
2	8	8.7e-05	0.0024	18.8	2.9	1	23	343	367	343	367	0.91
3	8	0.022	0.6	11.2	0.6	1	21	586	606	586	607	0.95
4	8	1.7e-05	0.00046	21.0	2.1	1	23	1425	1447	1425	1447	0.99
5	8	5.8e-05	0.0016	19.3	3.4	1	23	1453	1477	1453	1477	0.92
6	8	0.0012	0.033	15.2	1.7	2	23	2020	2041	2019	2041	0.97
7	8	0.00099	0.027	15.5	2.4	1	23	2048	2072	2048	2072	0.92
8	8	0.0032	0.089	13.8	2.7	1	23	2090	2114	2090	2114	0.93

Sequence Information

Coding Sequence: ATGGAAAATTCATCAGATGCTAAGGAGTACACTCACAAGAAATTCAAGAAAACGTCAGTGACTATCCCACCGTTCGACAGTGGCGTCGTTACAGcatcaacaacaacaacatcaacaacaacaacaacatcaTTATCAACAGCGTCGGTGACAGAAACCCGTACAACATTGACGCAAGCATGCGTCGTCGACGGTTACCCGAGCAAGGGGACGTCGAATGACGATGCTACCAAGACGCTTGCTAAAGACGTTAACAGAAACATAACCTCTCCCGTTAGTACAAAATATGTAGAATCCCTTACTGTAATCACAACTAGCATTAATGACCCATCATCACGTAATGACCAAGCAGCTTCCATATCAAGTAAATGCATAGTCGATTCAGTTCCTGATGTAAAATCTATTTCTAATGCAGAGTCTTCCGTCAAAGAAACTCATCgacaacatatttttaattcgcAGAAAagttttaattctattttagaTACGGATAAAATTATCGATAACAAAGGATCATTACAGAGCAACCAATCATCGTCGAACATATCACTCGTTAAATGTAGCTTATCCAACGATAAAAAACTGCGGGTGGAGTCGTCTTCCTCGCCGCACCACAACGATGTAAACAATAGATTCGGTACCGTCTCTACCTCTTCACAACCTATCAAAACGGAAATTGTTAATTACAGTCAAACATACGAACCGGTCACGAGTATATCTTCTTCCGAACGGCATCCCGGTTATCCCGTAAACATATCGTCGAACATTATTTCGACGCAGCCTTTGATCTTTTCGTATGACACGTCGTCAGCTTACAACGTCAGATCTTCGGAGTTGGACGGCAAAACAGTCGATCTGACGGTGGGAAGCGTCGTCAATGTCAAAGAAGAACCTGTCGAAATTAAAAAGAAGCCCGCCGAAGTCACCGGTCAGGGCGGCAAATACGTGTGCTCGTATTGTAATCTCCCGTGTTCAAAACCGAGCGTGCTTCAGAAGCACGTCAGAGCGCACACAAATGAAAGGCCGTATCCGTGTACAACTTGCGGATTCAGTTTCAAAACAAAATCGAATCTGTACAAACATTCAAGATCGCGATCGCACGCGAACAGAGTCAAGGGCGACAGCAATTccgaaataaacaaaaacaaaacggaAATGCCGGAAACAGTTGAACAGAATGTGCGCGCGACGACGTCAGTTCGCAATGAACCAACTCAGTACTACGGCACGTCTGCAACGTCGACTAGCGCGTATAACATAATTAATTTGTCGATGAGTAGTGAAGTTAATAATATGGTGGACGGACATAAAAGTGTTATTAGTGCGCAGGGTCGGAAACCGTATAAACCGAAATTTCAATTCTTTTCACGGTTGGATAGCGACGGGGGGGATAATGTTGATGGCAAAGAACAGGAAGAATCTAAGCAAAAATCTGTATCCACTAAATTGGTTCTTTCGAATGAATCACTGAAGAAAGGTAACGATAAATTAACGCAACACATAAACGATTTGATCAAGAAAAATCAGTCAATTCTGGATGTGAGAGagccgaattttttgaaaaaacgcgCTCATCACGTCGACACGAACGAGAAtagaaattacacaaaaaaccaATACGATTCTAATGTATCGGTCGACGAACCGCTGAATTTAATTGCGCGAAATCGTAAGAGATGTATGAGTGAATCGGAACACACTCAGAAAAGTCTGATTAAGGAATTGTTGTTAAGAAATTTAACGCAGGAACAAACTTACGTGTGccagttttgtaaaatatcatttaaaaatattgaaaactttgaaatacatcgaaaaaattattgtaaggtCGGTGAAAATCCTACATCGAAAGACATTGCCTTTGTGAGAAGTCATTCGGTAAACGTGGCTTCGATTTTGCATAAGAATTTTTCGAAAAACGACGAAAATCCAAGCAGATTTGTGAGAACGAATTTGCCTTTAAAGTCACCCGGGCCGTATCTTGGAAAAACTAGTCTTATCAGCGATAAAGGCCAAATACCGCAAGTGTTTTACGAAAACAAAGCGCCGACGAAAATACATTTAAAGGCTCTGTCGATATCTCACGACAATTTAACGAAATCATTCGACAGAAGTAATACTTTACAGGAAATAATCAACAAccctttaaaaaacaataatgaaatcaTAATGAAACCTCAGAacataattatatctgaacacgATTCCAAAAAACATCTCCAcgaagaatataaaaatgtctACGGTTCTAATTATAGTGCAAAAACTCAAATGCCCGTAAAACTGTTCGGCGGAGAAGTAAAGATAACCGAAATGTCTGGAGAGACCAGAAGTTATAAAATCGAATCAAAGAACGTTTGTgatttctcacaaaacaaccaacCGTTCATTAATTACGGAAATAACCTCAGCGAAAATATGGTTATAAAATCGAGTTTGCAGTCGGGCGGAACTCTCGTACAAAATTCTCCCAGCTACGATAAAAACTCATTCTCTTCTTACACGCCTAAATTTGAGACAAACAATTCGCCGAGCTTTCAATTTTTCAACTCGCCTTCAGTAAGCAAAAACAGTGCATCAGAACACGAAACGTCAAGACGAAATTATCAAGGAGAAATGACGAGAAAAGAAACCCCAACACGTTTCGATTTCAACGTGAAACCCCAAGATAGCATGTACgatcaaaatttaattgatttggGTCAAAAAGCCGCGAAAATATTTGCACCAAATTTAAAACAGCCGAATTTAACGCTTCCTGGTCTTCCCATTCCGAGTTACAATTCGCCAAAAAAACATTACTCCGACAATTTAGACCAGGCATCCCCGAGTTGGTCTTTGAATAGTCCTCTATTTTCTCCAAGTTACATGAAATTGCGACAAGATTTGACGCCGTCGACCCCTGACGTTTTCTCGCCGAAACCTGACAGGACAAAGCCGAATTTTCCGGAAGTGCCGTCGAAACCTCTTCCAACAGTTGAGATCACGCCTCCGTCAGGCCGACCGAATAATATTGTCCTTTCGCAGCCAAGTCCCGTCGGCGCCGCCGCACCCCAGTCGACTTTTAACATGCATGGATTACGTCTGTACAATCCACTGAATTTACTCGTGAATGGAAAATTGGTGCGCTATGTACCCGGTATGCCCGGCCCCGAAACCGGAAATCCCATTCATATTGGAATTGGCGGTCCTGTACTTCCTAGTCCGTTACAGATTGGCAAAACCGTAGACGCAAACGaaactaacaatttttcacCGAAAGTAATGAAAACTTCGCCGGTACcgcgtgaaaataaatttaattttaatataaggcCGGAAAACGACGTCGGAAACGGCGAAAGTCTTAAAAGGCTGACACCGACGCACATGAGGCATTCAAATAACTCATCGAGCGTAAACAATTCGACTGTAAAAAATACTGAGAAATCGAGGATGCTCAGTCCGAAGAAGTTTGAGAACGAACCGATTAATTTTGTTCAGAGTAGAAGTCCGTTACAGCATGAAAATGTCGAAATTAAAACCgaatctgtaataaaaaatttcgaaCCGGCTCCACCGCGCAAGTCTTTAAAGAACATCCGAATTTACAATGAAAATTCAACAAAGACGGttagaaatattgaaaacgtCGATCAGATCGGTGAGAATAAAGCTGCTTCAAGAATACCTGAAAACGATACAAAAGAAATACCTAAAATTGAATTGGACGCGTCGAGAAGAGGTGCTGAAGACGAAAAGAAACCAATGAAATTCTTACGTCCGAATACGTTGGCAATTAGACCGAACTCATCCGTAAAAACTCTGCACGGCTTGACGCCGAGTTTCTTAACGCAAGATTTGATCAGTCCCGATACTCCTCGTTTTGCCAAGAAATATTGTCAGCTATACATAAACGGCTCgtattttacaaatttgaaattgaaaacatCTACGAGACAAACATACTGCACCCTCGACATGCCGCAACCGATTTATTGGCCGAGTTACGCCAACCTGAGTATGTATacgcattacaaaaacaaacgcTCGGCAACCGACGTTCCAGATCTCTTCAGACATTGTTACGATTCACGACAGAGATCGTCAAGATATACCGTTGCGAAAATGAATGAAATGATCACCGTTGAATCGAGTTACAAGtcgatGATGGAAACCATGCAAAAGAAAGAAGAGACTAACAAATGCATCGCGACTACTTCGTTGCCGGGTGGATATTACGAGTCAAATGACGATTACACATATATCCGAGGCAGAGGAAGAGGAAGATATGTTTGCGATCAGTGTGGAATCAGATGTAAGAAGCCTTCAATGTTGAAAAAGCACATCAGAACACATTCGGATGTCCGACCTTATACATGTCTTCAGTGCAATTTCAGCTTTAAAACAAAAGGTAACCTGACGAAACATATGAAGAGCAAATCTCATTACAAGAGAACTAGCACGAGTAGCAGTCCTGCCAGCGACACGCACACACCGCCTCGCAGTAGTACCACCACGGATGACGAAAGCGATAGCGATGTTGATAGCGatgacTCGATACGTTTGCAAGAACATGAAGCAGCGCACAGTCTTTTGTCTTTGGCGCAACCGCGTTCTTCTCAAGAATCGAATCCTGATAGTTCGGACATGGCGTCCGACATAACTATTATTAGTGAAAATAAACCCGAAAGCTCCAAGTCTGATGTAACTATGTCGACGTCGACAAAAGTTTCTGCTTCAGAAAATCCAAGTTTATTATCAAACGGAAATCTAACTGATCCACCAACTCCGTTAATGTATCCGTATATTAAACAAACGAATCCTACATCCGATAATCAAGACCCCAAAATGGAAACGTTGAAAagtatattgtattataataaaattatattacgtGTGAAAGAATTCGATATTTCGAAATGTAAGCCAATTACGCCGATAGACGCTGCGACGCCgacaaaaatacagtttttgaACGATCAGATAGAAAATCCCGATCTTTTTATCGCTAATTATCAACAGAAGTTTATCAGCCAAAACGAAGAAATCGCTTCCCCGAGCGTCGGGGTGATAATCAATGAAATAAATGTTCCGGAGAATTTTGTTCCTTTTGCAGACTTTGCGCATAAGCGGAAATTATCATTCGAATATTCTGAAAATGAGCCGGAACCGAAAAGAAAAATGTCTGTCATTGAGCTACCGGATATTTCGAAACTCGAAAACGGAAATATTCGAAAGAGACATGTTTCTGTTGACATCCCAAACAATCATACGGAAGAAAATTTTACGCACAAAAGAAAGATCTCACTGGACGTACCCGTGAACTGTAACGAAAAAATTCAGAGAACTCATCGTTCGTCAGTTCCGAGTAATGTTCAACGGAACACGTTTGAAAATTTCTCGAGGGCGATGGATTTATCTGTTTCTAAGGAATATGTAGAAAATAGAAACGCATCGGCGAGGAATGAAAATTCTACAATCTTAGATTTAACGAAGAAGGATACCGGTTCGTTCTCGGCTACGCCAGTTATTACAATTTCGATGAATTCCGGTCACACGGTACAACAAAAGATTAGTTCGGATCCAGAAAGCGCTAAATTTGGTAACGAACAACGTTCAGAGTTTagtaacgatttaaaattaagcATAAAACgtaaacttttaaattacaataaaaccgTTCAAAACTCACAACCGGTATTGGAAAGTGTTCCGAGCGCAGTCGACAAAACTGTTGAGGAGCAAAAAGTAGACGGTGCGATCGATTTAAATCGAATCGATAAAATCAATCCGACCGAAACCAGGTCAGATAGCGATTCGAACATGTCTGAACGAAGCGTTTCCGTAAATAACAACTTATCGAAACTGCAGAACGCCGAAAACGACGTAGCAGCAGATATGGCACTAAAAAGGGAAATCgtcgaaaaaaataaactggCACAAAGCGTTGCGTCAGAATATTTGAAACTCGTATCAAAGAACGATTCACAGAGCGATTCTAGTGTTGGCAGCAATGGATCGGCCGATGCTGTCGTCAAGAGCGACAGTATTTTTAATTCGGAAGAAAACAAAAGCTGTACGATATGTTTCAAGAATTTCAACAAACCATCACAATTAAGATTGCATACGCAAATTCATTATTTTGCTGAACGAAAATTTCGCTGTGACTCATGTTCGGTCAGTTTTAGAACAAAAGGGCATCTACAAAAACATGAAAGAAGCGCTAGTCATCACAATAAGTTATCATCAACGCCAACGACCAGCTCGTCAGAACCTCGTCCGTTTAAATGTTCCGACTGTAATATTGCATTTAGAATACATGGACATCTAGCAAAGCATTTGAGGAGTAAAATGCACATAATGAAACTGGAATGCTTGGCTCGTGTTCCGTTCGGTTTGTATGCAGAGTTGGAGCGAGCCAATAGCCTGCTCACTGAAATTAATACGACCGACTGTAACCTTTGTCTTGAAAGTTTAAaggttttggCGCGCAAGTTATTCAGTAACGATCCGAATAAATTAATTCAACTGGAAAATCCTCTTTCGAACAACTTGAATCAAGATAGCCAAGAACACGCAGTCGCCGTTCAAGACAACTAG
Protein Sequence: MENSSDAKEYTHKKFKKTSVTIPPFDSGVVTASTTTTSTTTTTSLSTASVTETRTTLTQACVVDGYPSKGTSNDDATKTLAKDVNRNITSPVSTKYVESLTVITTSINDPSSRNDQAASISSKCIVDSVPDVKSISNAESSVKETHRQHIFNSQKSFNSILDTDKIIDNKGSLQSNQSSSNISLVKCSLSNDKKLRVESSSSPHHNDVNNRFGTVSTSSQPIKTEIVNYSQTYEPVTSISSSERHPGYPVNISSNIISTQPLIFSYDTSSAYNVRSSELDGKTVDLTVGSVVNVKEEPVEIKKKPAEVTGQGGKYVCSYCNLPCSKPSVLQKHVRAHTNERPYPCTTCGFSFKTKSNLYKHSRSRSHANRVKGDSNSEINKNKTEMPETVEQNVRATTSVRNEPTQYYGTSATSTSAYNIINLSMSSEVNNMVDGHKSVISAQGRKPYKPKFQFFSRLDSDGGDNVDGKEQEESKQKSVSTKLVLSNESLKKGNDKLTQHINDLIKKNQSILDVREPNFLKKRAHHVDTNENRNYTKNQYDSNVSVDEPLNLIARNRKRCMSESEHTQKSLIKELLLRNLTQEQTYVCQFCKISFKNIENFEIHRKNYCKVGENPTSKDIAFVRSHSVNVASILHKNFSKNDENPSRFVRTNLPLKSPGPYLGKTSLISDKGQIPQVFYENKAPTKIHLKALSISHDNLTKSFDRSNTLQEIINNPLKNNNEIIMKPQNIIISEHDSKKHLHEEYKNVYGSNYSAKTQMPVKLFGGEVKITEMSGETRSYKIESKNVCDFSQNNQPFINYGNNLSENMVIKSSLQSGGTLVQNSPSYDKNSFSSYTPKFETNNSPSFQFFNSPSVSKNSASEHETSRRNYQGEMTRKETPTRFDFNVKPQDSMYDQNLIDLGQKAAKIFAPNLKQPNLTLPGLPIPSYNSPKKHYSDNLDQASPSWSLNSPLFSPSYMKLRQDLTPSTPDVFSPKPDRTKPNFPEVPSKPLPTVEITPPSGRPNNIVLSQPSPVGAAAPQSTFNMHGLRLYNPLNLLVNGKLVRYVPGMPGPETGNPIHIGIGGPVLPSPLQIGKTVDANETNNFSPKVMKTSPVPRENKFNFNIRPENDVGNGESLKRLTPTHMRHSNNSSSVNNSTVKNTEKSRMLSPKKFENEPINFVQSRSPLQHENVEIKTESVIKNFEPAPPRKSLKNIRIYNENSTKTVRNIENVDQIGENKAASRIPENDTKEIPKIELDASRRGAEDEKKPMKFLRPNTLAIRPNSSVKTLHGLTPSFLTQDLISPDTPRFAKKYCQLYINGSYFTNLKLKTSTRQTYCTLDMPQPIYWPSYANLSMYTHYKNKRSATDVPDLFRHCYDSRQRSSRYTVAKMNEMITVESSYKSMMETMQKKEETNKCIATTSLPGGYYESNDDYTYIRGRGRGRYVCDQCGIRCKKPSMLKKHIRTHSDVRPYTCLQCNFSFKTKGNLTKHMKSKSHYKRTSTSSSPASDTHTPPRSSTTTDDESDSDVDSDDSIRLQEHEAAHSLLSLAQPRSSQESNPDSSDMASDITIISENKPESSKSDVTMSTSTKVSASENPSLLSNGNLTDPPTPLMYPYIKQTNPTSDNQDPKMETLKSILYYNKIILRVKEFDISKCKPITPIDAATPTKIQFLNDQIENPDLFIANYQQKFISQNEEIASPSVGVIINEINVPENFVPFADFAHKRKLSFEYSENEPEPKRKMSVIELPDISKLENGNIRKRHVSVDIPNNHTEENFTHKRKISLDVPVNCNEKIQRTHRSSVPSNVQRNTFENFSRAMDLSVSKEYVENRNASARNENSTILDLTKKDTGSFSATPVITISMNSGHTVQQKISSDPESAKFGNEQRSEFSNDLKLSIKRKLLNYNKTVQNSQPVLESVPSAVDKTVEEQKVDGAIDLNRIDKINPTETRSDSDSNMSERSVSVNNNLSKLQNAENDVAADMALKREIVEKNKLAQSVASEYLKLVSKNDSQSDSSVGSNGSADAVVKSDSIFNSEENKSCTICFKNFNKPSQLRLHTQIHYFAERKFRCDSCSVSFRTKGHLQKHERSASHHNKLSSTPTTSSSEPRPFKCSDCNIAFRIHGHLAKHLRSKMHIMKLECLARVPFGLYAELERANSLLTEINTTDCNLCLESLKVLARKLFSNDPNKLIQLENPLSNNLNQDSQEHAVAVQDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01531272;
90% Identity: iTF_01531272;
80% Identity: -