Vnig011671.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Venustoraphidia nigricollis
Gene Symbol
ZNF131
Assembly
GCA_034508555.1
Location
JAVRKA010000032.1:685336-692685[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 8.7 2.4e+02 3.1 1.4 2 12 507 517 506 529 0.84
2 17 0.033 0.91 10.7 1.1 1 23 537 560 537 560 0.93
3 17 0.56 15 6.8 2.1 1 20 569 588 569 590 0.94
4 17 7.8 2.1e+02 3.2 0.2 2 16 599 613 598 620 0.80
5 17 0.0064 0.18 12.9 0.2 3 23 629 650 627 650 0.96
6 17 0.059 1.6 9.9 0.8 3 21 660 678 658 679 0.92
7 17 0.0024 0.066 14.2 2.0 1 23 686 708 686 708 0.97
8 17 0.00015 0.004 18.1 1.2 1 23 714 736 714 736 0.99
9 17 0.00081 0.022 15.7 5.3 1 23 788 811 788 811 0.96
10 17 0.13 3.7 8.8 3.2 1 23 864 887 864 887 0.94
11 17 0.39 11 7.3 1.8 1 23 894 917 894 917 0.98
12 17 0.61 17 6.7 0.4 2 23 925 949 924 949 0.94
13 17 0.00022 0.006 17.5 0.7 1 23 959 981 959 981 0.95
14 17 6.2e-05 0.0017 19.3 2.6 1 23 987 1010 987 1010 0.96
15 17 0.00016 0.0045 17.9 0.9 1 23 1048 1070 1048 1070 0.96
16 17 1.2e-05 0.00033 21.5 0.2 1 23 1076 1098 1076 1098 0.97
17 17 0.00028 0.0077 17.2 1.6 1 23 1104 1127 1104 1127 0.95

Sequence Information

Coding Sequence
atGTCTAATTCAGAGCTTAATAGTGTAACAAAAAGTATCGAAATTAATACTAGTGATAATTCATCTCTTAATTCGAACGGTCATATAAATGCTGGTGAGcttataaattcaaataaaagtagCTTTACTGATGACGACAGTCTGTCTTTGGAAACATTATTAGAAGCACCTGAAAAAGTGTACTTCAAAAATCAAGCAGATGATCACATTCCTGCCATTGACATCCAGATATCTGATAACAGTCGTAACTTAGCAGTAGATTTAACTGAAAATATGGAAACAAGACATACAGATAATCAGACCcttcctgataattttaaatcagaaaatgAGACGTCCGATGAAAATCAATCAACAGAAATTCCGAGAAATTCTGATAACGATACACatacgataaatttaaaaagtccTTCCGAAGACCAAACTATTACTTTGGATTTCAATAGTTTAGATTCAAGAAAAATAACAGACGACTCAGTTATAGAAAATAACCGAAATACAGTATTTAAtgcgaaaataaatttttcatctaCATTAGAAAACGTACGAAAGAATTTCTATTCTCGAAGAAAATCAGAAGACGATGTTTCAATTGTTTTCGAGTCACAGCAACCGAAACCGGTTCGCCGAAAGCGAGGTAGGCCTCGAAAGAATCCAATACCCGTAACGGAACGACCGAAAACTGTCGACGATGCTGTTGAAAGTATAGAATCAATTGAGAATTTCATTAAAGCTACCGATagacaaaatattgataataaagtCGATTTGAATCTCGATTTACATGAATCTGAAACACTTATAAAAGAACAGTTATCTACTCGGATGTCGGTGTGTAGACTTTGCGCTCAAAGTTATCAACCGGGTTGTATCATGTTTATGTACGATGATAAGCATAAAGAGATAGATATAGAATGGAAGATAAATTCTTGTCTACCGATAAAAGTAGAAAAGAATGATGGATTACCACACTGGATTTGTGATAGCTGTTACAGGAAAATCGACGATTTTCATAAATTCATTAATTGTGTTTTAACCGCGGAGCaagatttgataaaaatatatcaaaaaaataatagagaTGCAGATAGTGATAcgaaatttaatacaaaatcgCGGAAGCAATCTAAACGaaagcaaaattttaaaaattaccagtcttcaaaaataaaatgcactGATTCCAAAAATATCTCTGATAAAGAAGTTATTGCAAATATATTAGAAGATAAAAACACTGACATTATTGGAGAAAATGTCGACTACAACGTTGAATATTTAGAAAGTGATCACGAAGATTTGATTGAGCAttttaattcaaacaaaaacggTAACTCGAACGATCCGAACTTTGATTGTCAATTTGAAAATCAGCAAACCAATTGTATATCTGATAACTTCGAAACTTTGCATCAAACTCAGAATGCGCCTGTCGATGGACGTTTTGAAGACGTAGATGATTTAATCAAAGGAAATTACGATCAAAATAATACGATTGTTGAACAGATGACACAAGTTGAATGTAgacactgcaataaaaaatttgaaaatgttttatgcaCAACCGATCATTCAATCGAAGAACACAGTAACGTGATTGAGGGTTTGTTTCCATGCTGCCTGTGTGAATATGGTTTCAGTAGCAccgaaaaattacaaaaacatgttttggGATTACATTTCACCGGGATACAAACGAAATTTTATCAGTGCACAAATTGCGATTCAAAATTCGCTACGGATCTTTTGTTACAACGTCATTTTTGTTCGTTACAAAATCGAGTTCAAGATCTGAGctgtaaaatttgtaatataatatttccaTCGAAAATAAGATTGGCTTTCCATTCCCAGTTCCACTTTAACGGAGCCGTTCCGTTGTTTTGTACCGACTGTGAGATCGCGTTCAAAGACGAAGGCGAATTTTTCGATCACAGAAAAACTGTGCACGATTGTAAACcaaataaagatatattttgtGATCACTGTAACAAAATATTCCCTAGTCTGAAGTCTTACAAAATGCacgaaaaattgaataaaaatataagaaattacaaatgtaataaatgtgacaaaacttttttggataAGCAGACATTGAAAGAACATTCTATCATGCATTTGAATGTGAAACCGTTCCAGTGTCGTATTTGCGGTAAATATTTGAATCGCGCCAGTCGACTTAGGAGACATCTGTTGACGCATGAAAGCGAAGAAACTCAGCCGACAGATGTTAAAGTTTGCAGTTTGTGTGCAGAGGCATTTTCGAACGAGGACTTGGCCGCTAAGCACGACATCTCGAATCATATAGAAATCGAGCGGAGCAACTGTATCGAGGACGTCCATATCGACAAGGTGTACCGATGTGAATACTGCGAAAGATGTTTCTATACCAAAGACGGATTGAATCATCATCGAACCGTACTACATACATTAAACGAAGAAAGTAATCCTTATAAGTGTCACATTTGCTCCGCACAGTTCCCGAATTATGCTAGatgTACCACACATAAAACAACACATGGCTATTTCAAGAATGGCGATGGAACCGAAATGTCCAAAGATTCGTTTCCTGTCCCCAAACATTTCCTGTGTGAACATTGTGGGAAGTCTTATTTACATTGGACATACTTAGgtgtTCACAGGCGCTTGAAACATTCAAAGTCAGTTTATATGTATAAATGTTCTGAATGTCCACAGCAGTGCCCCACATCCTGGGGAATTTCGTATCACAGAAAAACTAGACATCCATATTTGATGTCTGAACTTACATGCAAAGAGTGCAATCCTCCGGAACGTTTTCAGAATCGGAAATTACTAATGGAACACATGGAACAAAAACACGTCCATTCCGAAGCAGGAAATCAGTCCTACCAATGTGAGATCTGTGGTAAAACTTACATCAAACCAGAATCATTGGAAATGCATAAACATGATCACATGGGAAGTACTGACCACGTTTGCTTTACGTGCGGGAAATCATTTGTACATTCAGTCGGTTTGCAGAACCACATGCAGTCTATGCACGGTGTAAACCGTTCAGAATGGAAACACGAATGTCCATTTTGCGAACGGAAATTTAATTGTTCAGTACAGGAGTTTGAAACTCATCTCAAAAAACATTCGGGCCAGAAACCGTATGAATGCATCCAATGTGGAAAAACATTTAGAATCAAAAGTCTACTTACAATACATACTAGGACTCATACTGATGAACGGCCCTTTCCGTGCAATATTTGTGGATTGGCTTTTAGAAGATCGTATGCATTAAAAGTTCACAAAATGATACACGACGACATTAAACCTTTTCAGTGTTCgatttgcttaaaaaaattccGCCAAAGACCTGAATTGCAAAAGCACACTAATGCTAAACATTCAGGTCGTTTTGTTTTGATGGTAGATTCAAGTGGCCCTGAAGAGAAACACAATGAGCTGGAAACACTCGAAGATAATTCTGAACTTGTTGATGATCCAATTAacgtaaatttaaataaaagtgggATAACGGTGCTGGACCCtaatgcaaaaaatgaaaatgtcgtCATTTCAAATAGTTTAATTGATCAGAATTTTCTTTTTCGAGATAAAAGCTCTTCACTGCAGATAAACAGTGATAGTGGTTTGCAGTTTATCGATCAGAAAGAGACTGAAAATGAACCAATTATAATAACTGAACAAAGTCCTGATGGTAACATTATTATTCTAAATCAGAACGTCAAAGAAGAGTATCAGAATAATATGTgtatcaaaaatgaaattgtcgGTAGCAATGTAATTGATGATGTAAACGGACAATACAATAGATTAGTTTTGAGCAACGGTACCGAAATGATTATAGATAATGCCaactataatgaaaataatttgatttttatcgaTAATGAAAGTCCAGAACCGAATTATATTGTCACCGTTAATGAGGATGATAttggagaaaaatattttttacaaattaaagaTGATAAGCAGATACTGATAGAAAATAACAGTCAACaatatattgttaataaaagtGAACTCGGTTTATCCTAG
Protein Sequence
MSNSELNSVTKSIEINTSDNSSLNSNGHINAGELINSNKSSFTDDDSLSLETLLEAPEKVYFKNQADDHIPAIDIQISDNSRNLAVDLTENMETRHTDNQTLPDNFKSENETSDENQSTEIPRNSDNDTHTINLKSPSEDQTITLDFNSLDSRKITDDSVIENNRNTVFNAKINFSSTLENVRKNFYSRRKSEDDVSIVFESQQPKPVRRKRGRPRKNPIPVTERPKTVDDAVESIESIENFIKATDRQNIDNKVDLNLDLHESETLIKEQLSTRMSVCRLCAQSYQPGCIMFMYDDKHKEIDIEWKINSCLPIKVEKNDGLPHWICDSCYRKIDDFHKFINCVLTAEQDLIKIYQKNNRDADSDTKFNTKSRKQSKRKQNFKNYQSSKIKCTDSKNISDKEVIANILEDKNTDIIGENVDYNVEYLESDHEDLIEHFNSNKNGNSNDPNFDCQFENQQTNCISDNFETLHQTQNAPVDGRFEDVDDLIKGNYDQNNTIVEQMTQVECRHCNKKFENVLCTTDHSIEEHSNVIEGLFPCCLCEYGFSSTEKLQKHVLGLHFTGIQTKFYQCTNCDSKFATDLLLQRHFCSLQNRVQDLSCKICNIIFPSKIRLAFHSQFHFNGAVPLFCTDCEIAFKDEGEFFDHRKTVHDCKPNKDIFCDHCNKIFPSLKSYKMHEKLNKNIRNYKCNKCDKTFLDKQTLKEHSIMHLNVKPFQCRICGKYLNRASRLRRHLLTHESEETQPTDVKVCSLCAEAFSNEDLAAKHDISNHIEIERSNCIEDVHIDKVYRCEYCERCFYTKDGLNHHRTVLHTLNEESNPYKCHICSAQFPNYARCTTHKTTHGYFKNGDGTEMSKDSFPVPKHFLCEHCGKSYLHWTYLGVHRRLKHSKSVYMYKCSECPQQCPTSWGISYHRKTRHPYLMSELTCKECNPPERFQNRKLLMEHMEQKHVHSEAGNQSYQCEICGKTYIKPESLEMHKHDHMGSTDHVCFTCGKSFVHSVGLQNHMQSMHGVNRSEWKHECPFCERKFNCSVQEFETHLKKHSGQKPYECIQCGKTFRIKSLLTIHTRTHTDERPFPCNICGLAFRRSYALKVHKMIHDDIKPFQCSICLKKFRQRPELQKHTNAKHSGRFVLMVDSSGPEEKHNELETLEDNSELVDDPINVNLNKSGITVLDPNAKNENVVISNSLIDQNFLFRDKSSSLQINSDSGLQFIDQKETENEPIIITEQSPDGNIIILNQNVKEEYQNNMCIKNEIVGSNVIDDVNGQYNRLVLSNGTEMIIDNANYNENNLIFIDNESPEPNYIVTVNEDDIGEKYFLQIKDDKQILIENNSQQYIVNKSELGLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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