Basic Information

Insect: Venustoraphidia nigricollis
Gene Symbol: Zbtb11
Assembly: GCA_034508555.1
Location: JAVRKA010000021.1:2607846-2613789[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0031 0.084 13.9 1.3 2 23 181 202 180 202 0.95

2 11 0.00027 0.0075 17.2 1.2 3 23 212 232 210 232 0.96

3 11 0.00015 0.0043 18.0 1.5 1 23 237 259 237 260 0.95

4 11 0.00043 0.012 16.6 0.4 2 23 266 287 265 287 0.97

5 11 0.0029 0.078 14.0 1.0 1 23 292 314 292 314 0.96

6 11 0.00038 0.01 16.8 2.0 1 23 319 342 319 342 0.97

7 11 0.0011 0.029 15.4 0.3 1 23 375 397 375 397 0.99

8 11 0.0053 0.15 13.2 0.9 3 23 408 428 407 428 0.99

9 11 7.3e-07 2e-05 25.3 2.5 1 23 434 456 434 456 0.99

10 11 9e-05 0.0025 18.7 4.1 1 23 462 484 462 484 0.98

11 11 4.5e-07 1.2e-05 26.0 3.3 1 23 490 512 490 512 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0031	0.084	13.9	1.3	2	23	181	202	180	202	0.95
2	11	0.00027	0.0075	17.2	1.2	3	23	212	232	210	232	0.96
3	11	0.00015	0.0043	18.0	1.5	1	23	237	259	237	260	0.95
4	11	0.00043	0.012	16.6	0.4	2	23	266	287	265	287	0.97
5	11	0.0029	0.078	14.0	1.0	1	23	292	314	292	314	0.96
6	11	0.00038	0.01	16.8	2.0	1	23	319	342	319	342	0.97
7	11	0.0011	0.029	15.4	0.3	1	23	375	397	375	397	0.99
8	11	0.0053	0.15	13.2	0.9	3	23	408	428	407	428	0.99
9	11	7.3e-07	2e-05	25.3	2.5	1	23	434	456	434	456	0.99
10	11	9e-05	0.0025	18.7	4.1	1	23	462	484	462	484	0.98
11	11	4.5e-07	1.2e-05	26.0	3.3	1	23	490	512	490	512	0.98

Sequence Information

Coding Sequence: ATGGAAAAGCGGGCAAACTTTTCGAATATTTGCCGTACTTGTTTAACAGAATTAAACGACATGAAATCCATATTTTCACATAATATTTGCGAAATGCTGACTACCTGTGCAAACCTCAAAATACGCAAATCTGACGGACTACCGGAACAAATATGTACTAAATGCATCGACGATGTTAAAATTTcgtatcaatttaaaataaaatcggaaAAATCCGATCGGTATTTAAGAGAAATCGTTCGAGAAGACGAACCGGTAAAAGACGAATATACGTCGATTGTAGTTAAAGAAGAGAACGGTTCAGaagacacaaaaacaaatgaaacctTACCAAAAACAGAAACACATCACACAGAATCGGACGATACGAAAGACATCTCCGAACTGGTGGAAGCCGATAGCTTCGACGATGACTCCAACGATTACGATCGAGACGTCAAGAGTCCGCCTCCCTCACCCGCGGAATCAGACGAGAGAAACGGCAAACcgatcaaaaaaagaaaaagtaaacCATCGACGCGAAACAAGAACAACGCTTGGAAATGCAAAATCTGTCGGAAAACTTTCCTCCACAAAGCTTCGTTACAGGAGCACCTGATTGCGCATCCGGAATACAGTACAAAAAGCCTCTTCTGTTCGATTTGTAGCAAAGTATATTTTGACAAGATGAGTTTAAAGTCGCATATGTTACGACACAGCGAAAAGAAATTCAGCTGCGAGACTTGCGACAAAAGCTTTTACGAGCTCGTATCGTTGGCCAATCACATCAAAAACCATCACGAGGCGAAGCCTGTTACGTGTCCGATGTGTCAGAAGTCGTTCGTTTTGCAGCTGCAGTTGGATTTGCATATGAAGAGGCACCCGGCGAAGAAACACGTTTGTAAGACGTGCGGCAAAGAAGCCAAATCGAGCAAAGCGTTGCGCGCTCACAATTTATCGCATAATACGAACCCATTTCCTTGCACGCAGTGCGATAAATGGTTTAAGTACGCGAGTAGTTTGAAAATCCACGTTCGAATGTGTCATCTCGGCATGAAGAAGAAAGATGTCTGTACGATATGCGGTACTGAGGTTTTCAATTTGAAACATCACACAATACGCAAACATCCGACAGACCGACCTTACAAATGCGATCAGTGCGATCAGGCTTTTGCGAAAGAATGGGTTCTCAACGATCATTACAAAATGCATACGGGCGAAACAACTCAACGGAAACAGTTGTGCACAGTTTGTGGCAAAGAATTACACGATGTCACTTCCCTGCGTTACCACATGCGAATCCATACTGGTGAGAAGCCCTATAAGTGTTTGCAGTGCGACAAAACTTTTAAAACGAATAACGAAATGAGGGTTCATATGCGTACTCATTCGGGCGAACGACCCTACGAATGCCCTCTGTGTCAGAAAAGATTCACTACAAAACGATGCGTCAAGAAGCATCAGTTGGTGCATACGGgcGAACGACCTCACAAATGCACTCTTTGCGGACGAGGGTTCAGTCAAAAGTCGTCTTTGAAAACTCACATGAAAATCCACTAA
Protein Sequence: MEKRANFSNICRTCLTELNDMKSIFSHNICEMLTTCANLKIRKSDGLPEQICTKCIDDVKISYQFKIKSEKSDRYLREIVREDEPVKDEYTSIVVKEENGSEDTKTNETLPKTETHHTESDDTKDISELVEADSFDDDSNDYDRDVKSPPPSPAESDERNGKPIKKRKSKPSTRNKNNAWKCKICRKTFLHKASLQEHLIAHPEYSTKSLFCSICSKVYFDKMSLKSHMLRHSEKKFSCETCDKSFYELVSLANHIKNHHEAKPVTCPMCQKSFVLQLQLDLHMKRHPAKKHVCKTCGKEAKSSKALRAHNLSHNTNPFPCTQCDKWFKYASSLKIHVRMCHLGMKKKDVCTICGTEVFNLKHHTIRKHPTDRPYKCDQCDQAFAKEWVLNDHYKMHTGETTQRKQLCTVCGKELHDVTSLRYHMRIHTGEKPYKCLQCDKTFKTNNEMRVHMRTHSGERPYECPLCQKRFTTKRCVKKHQLVHTGERPHKCTLCGRGFSQKSSLKTHMKIH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01530936;
90% Identity: -
80% Identity: -