Vnig007198.1
Basic Information
- Insect
- Venustoraphidia nigricollis
- Gene Symbol
- CSRNP3
- Assembly
- GCA_034508555.1
- Location
- JAVRKA010000015.1:5457808-5460816[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.36 9.5e+03 -3.2 0.5 68 103 163 198 151 212 0.70 2 3 3.8e-106 1e-101 340.0 11.1 1 218 390 599 390 599 0.95 3 3 0.017 4.5e+02 1.1 0.2 44 108 842 899 819 914 0.55
Sequence Information
- Coding Sequence
- atgtCAAAGAGCAACTGTGATTCAACTGATGAATCATTCGACAAAACTAGCGACAAACAAGAACCGCACAGCACAATTGTTAACACCATTCTTAGTGAACAACAATCACAAGCGACGTTTCCTTCTTGCGAATCAGACACAGCAAACAACGACACAATACCGCACCAAATCACCGCAACACCAGACACCACCGACATGGGAGCTAAAAACTCAAGAAATTCACCCGATGCACTCGATAAAAGCAAAACCGAAGTTACTTCATCAAGTGTTGATGAAGATTCAATTGTTAACGAAAATACACCTGTTATTGTTGATACAACACAATGTAGAACCAAAGACAGTATTGTTGATTCGTCGAGGGACGATTTATCCGAGCGTGAAAATTCTAAACTAGTAGTCCGACCGATTATAGGTCATAATAATGAAGCAATATGCAAAAGTAacgatgaaatatttaataacgttAGTAATTTATTATCTCAAAATAAGGATTTTTTAGAAGCAATGGATATTGCGATAGATGAATCAGATAAGCACTCATCAAATACCGAAAGCATGACTGAAACCGAATCACTACTCGAAGAAACACTTGATACAATGGTTAAACCTGATTCGATAACTACTGAAGGAGAAGATTCGGCAACTGAAAGTTTACCGAGCGATACAGCTCCCGGTTCAGGTCATGAAGAAGAAGTTCAGGATCGTTCAGATGGCAGCGATTCTGGTTTGGGATCAGAACTTGCTGAAGAACGAATAACGGTTGCTCCGAATGAAAGCGACAGCGAAACATTATTTCTGGATAGAATATCAGATGATTTGCTTCCTAATGAAATTGAAAGGGATACAAGTACAGCAGTACCACTGAGTCCCTGCAAGGTGAATTTGGGTAAAAGAGAAGAACTAGTTGCTGAAATCAACAACAGGTTTGATGAACTTGGTAACAGTACTAAAATCTCGTCGTCAGATTTTGACTTGCCAAGCACAAGTTTTCAGTGTGCCACTAATAATTTCGATGTTAAAAGTCTTGACCAACCGTCTAGCTCTACAATAGATAGAGACATAGGCGAAATTTTAGACGAAGCAAATCTAGCTTCAATAAGGTCGTGTAAGACGAAAAgtaatttgaaaagaaaactgTCAACTTCCGATGAATCGGAACCAAAACGTAAAAAGAAGAAAAGTATAACGTTTGATAGTGTGACAGTTTATTATTTTCCGAGAGCTCAAGGTTTCACGTGTGTTCCGTCGCAAGGAGGTTCCACTCTTGGAATGAGTGCCCAACATACACATATTCAAAGATTCTCGTTGGGTGAACATGCAATGGAACAGCGTAGAATACATCGGCAAATGTTGCAACAGCTTCGAAACGAACGACATGCAAATCAAACGAATAATGTTTCGTCGAGCGACGATAGCGACAGTGATGAAGAACCAAGCGACGCGTCCGAATCTGAAATGGACCTCGATAGCTACTATTTCTTACAACCGGTGCCGACGAGACAACGACGCGCGTTACTCAGAGCGGCGGGAGTGAGAAAAATCGATGCTCAAGAAAAGGATGAGTGTCGCGATATACGTTCATCTCGTGAATTCTGTGGTTGTGGGTGCAAAGGCTACTGTGATCCAGACACATGCTCTTGTAGTCAGGCTGGTATAAAGTGCCAGGTTGATAGACTCAATTTTCCATGCGGATGCTCAAGAGACAGTTGTGGTAATTCTAGTGGTCGAATTGAATTTAATCCAGTTAGGGTAAGGACACACTTCATTCATACACTTATGAGACTAGAACTTGAAAgaaaacagaaaccggaaattGAAGAGGAAACTATAAAAACAGATACTTCGAACAGACATATTAGGTGGTCGACAGATGATAGATTAGCAATGCCGATCGCTTTTCAAGACCATACTAAATCGGCTGATCTAAACGGAATATCGTCAACTACAAGTAAGTACAATGGGACGTTGTTACGAGATGTTAATTTCACATCACATGTCGAAGTTGAGTCTTGTGTTCATAACGGTAGCTTCACTAATATGCAATATGGTGCAACCGGTGAAACACCGACAACTCCACAAAGTCATTCGACTCAACACGCGTCTTTTAATGGACTCGGGGATCTACCAGCTCGGGAAGATTCTCTCGATCTCTACACGTTCAGAGAAGATTGTTACGGTGAAGAAAATGCCAGCGAGTTATCTTCGAGTCAACCAAACTCAGACACGACAACACAAAGAAACGGTTATAACAGCACAAACATTCAGCAGAGAAAACTCGCTGTGTCTCATCATCAACCCTTCCAAGCTAACGCTGCATTTCATTTCACAACTGGAACAGATCCCATGACGCAACGTTTTCCTGAATTGAGTTTCCCGGTGGGTGGACCTTACCCTCATCAACAGACCTCAGGTTCTACGCCCGCCTCTAATCAGTACCCGCATCCTTACCCACCAGCATCTGGTTTCGGTGACTTTGGTCAACAGCATTCCAGTCTGGGAGTGTTTGGGCATTATAGCAACGTTTATGCGAGTACTGCAGAATTCGCTAATAAACATGCATCGATCACGTCTAGCGCTGCCGAATTTCAACATTCATCTACAAGTAGCAACAGCTATGAAAGTTTTAGTATATCAAATGAACATTTTCAACAACAATCCGAAATCAATAATGTCAAAGAGTCAAATGTTAATAGTAATCAGTATACGAGTTTAGATTCGGTATGCTCTCTAGGAAATAAACTCGAATCATTTTCGGAACTGTTGCAAGGACGATATAATTACCCTGCGTTTGACGATCTTAACACAGGGAATACAGTTGAAGGACCAGCTGCCACCTACAATAGTGATTTGTCATCTGAAACTCAATGTGAACTTGAAACGAAATGTGAGGAAGCGAGGGTCGAAAATAACGTCAGTCCTACAATTAATAGTAACACAAATTCAGATGATTGTGACGAAAACTTtggtgaaataattaaaaaaactatggtTGAAACAGTAACAGCATAA
- Protein Sequence
- MSKSNCDSTDESFDKTSDKQEPHSTIVNTILSEQQSQATFPSCESDTANNDTIPHQITATPDTTDMGAKNSRNSPDALDKSKTEVTSSSVDEDSIVNENTPVIVDTTQCRTKDSIVDSSRDDLSERENSKLVVRPIIGHNNEAICKSNDEIFNNVSNLLSQNKDFLEAMDIAIDESDKHSSNTESMTETESLLEETLDTMVKPDSITTEGEDSATESLPSDTAPGSGHEEEVQDRSDGSDSGLGSELAEERITVAPNESDSETLFLDRISDDLLPNEIERDTSTAVPLSPCKVNLGKREELVAEINNRFDELGNSTKISSSDFDLPSTSFQCATNNFDVKSLDQPSSSTIDRDIGEILDEANLASIRSCKTKSNLKRKLSTSDESEPKRKKKKSITFDSVTVYYFPRAQGFTCVPSQGGSTLGMSAQHTHIQRFSLGEHAMEQRRIHRQMLQQLRNERHANQTNNVSSSDDSDSDEEPSDASESEMDLDSYYFLQPVPTRQRRALLRAAGVRKIDAQEKDECRDIRSSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCSRDSCGNSSGRIEFNPVRVRTHFIHTLMRLELERKQKPEIEEETIKTDTSNRHIRWSTDDRLAMPIAFQDHTKSADLNGISSTTSKYNGTLLRDVNFTSHVEVESCVHNGSFTNMQYGATGETPTTPQSHSTQHASFNGLGDLPAREDSLDLYTFREDCYGEENASELSSSQPNSDTTTQRNGYNSTNIQQRKLAVSHHQPFQANAAFHFTTGTDPMTQRFPELSFPVGGPYPHQQTSGSTPASNQYPHPYPPASGFGDFGQQHSSLGVFGHYSNVYASTAEFANKHASITSSAAEFQHSSTSSNSYESFSISNEHFQQQSEINNVKESNVNSNQYTSLDSVCSLGNKLESFSELLQGRYNYPAFDDLNTGNTVEGPAATYNSDLSSETQCELETKCEEARVENNVSPTINSNTNSDDCDENFGEIIKKTMVETVTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01530192;
- 90% Identity
- iTF_01530192;
- 80% Identity
- -