Vnig011841.1
Basic Information
- Insect
- Venustoraphidia nigricollis
- Gene Symbol
- ncor1_1
- Assembly
- GCA_034508555.1
- Location
- JAVRKA010000032.1:3510642-3521943[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.8e-09 1.2e-05 25.9 0.0 4 43 649 688 646 690 0.97
Sequence Information
- Coding Sequence
- ATGTCATCATCTTCCTCAGTTACATCCGGTGACGACTGGATCGCAGTCTCAAACGTTGTAGCTTTAATTATATACTtagtaatgttttgtttttgtttcgaTTTCAGGTCAGGTCAGCCAAATGATAACGCCGGTCCTCCGCCGCATAAGCAAGCACGTACTGCTCTATCGCCGCCCACGTCTAGAGCCCCGTCCGGCGGCTACGCCGGCAGCCCTTACCCGCCATCGAACCCGCGAGATCCCATCAGAGACTCTTTGCGGTACGTCGCCTCCCCGTATCCTTATCCCCGCGACCCCGTTTATCGTATCTCGCcccagcaacaacaacaacaacaccaGCAGCAGCAGCAACAGCAACATCTCGAATATATTCaacagcagcaacaacaacaacagcagcaaCAGCAGTCAAGACCGTCCTCCGATAGTAACGTGCAAAGAACAACACCTCAAGAACAACACGCCAGGGCGATACAAAGCGTTCAGCAGCAACAGGAACATCCTAGCAGTAGGACGTCGGGACCTCCACCGCAACCGCCACCCCCGTCGTCATCCTCATCCTCCGAACAACAGCACCAACAACAACAACACCACAGACCGTCCGGAGAACATCGCAATGTTCAACCACCTAGTGCCGCTTCCCAGTGCACGATCGATCAGCTCAGATCGATGCAGAACGACAAACAGCACCAGCAGCAAACGACGACAGAGCACCTGGTGCGCACCTCGCAACACCAGCAGGTCGAAGGCATGCGACTCGATCAGATCACGAGGGATCAACTTTCGCAGACGCAGATGAGACAGAGGATATCGCTCTTGCCGCCGTCGGCCGATTATCTGGCGCAGAGCATGGCGCGGACCGGCAACAGAGATCTGTACAGGCACGACAGTCATCACCAACAACAGCAGCAGCAGTCGTCGGCGATGGCGTCGGTGTTCGGAGGTGGCGCCGTGTCACAGCAGCAGGCGAACATGATGCAACACGTGCAGCAGATGGACGTTGTCAGTGCGGCCGGGCAATCGTTCAAGAAGATAAGACTAGGAGAACAGCAACAGCAAAAGGCGGAGCTGCATCAGCCGTTGAGAATTGATACCAGGGATCAACCGGGCTCTTACAATCCGCAGGTGGAGGCGATATCACCGACTCCAAATGAACATGCCCAAGAGGACCTGGCGTTCCGCACGACGAAAGACGAACTGCTCCAGATGATCAGCAAGGTAGATCGAGACATTGCGTTGCACGAATCGCAAATCatcaaattgaaaaagaaagaGCAGGAATTGGAAGAGGCAGCTTCAAAGCCGTCAATACAGCAGGAAGTTGAGGAAGTGGCTCAGCCGAAACATCAGAGTCTCGCTCAGAAAGTTTATGCGGAGAACAGAAAGTGGGCGAGGACGTCTCACCTGCTACTGGATAGCTTAGGAACGAAAGTCGATTGGCCGTTGTACAATCAACCGTCGGATTGTCCAGTTCTTCAGGAGAACAAACGGAAGCATCAGTCGTTCAAGAAGAGGCTCATTGAGTACTTCAAGAAACGGCACGCCGAGAAAGAACAACGCGAAAGTTATTTAATACAGACGTACAGTAAATTGATGCAGGAGTGGCTCAGGAAAGTTGAAAGGATTGAGAGTTCGCAGAAAAGGAAAGCGAAGGAAACAAAGAACCGCgagttttttgaaaaggttTTTCCTGAATTGAGGAAACAGAGGGAAGACAAAGAAAGGTTCAATAGGGTCGGTGCTAGAATAAAATCCGAAGCCGATCTGGAAGAGATAATGGACGGCCTCCAGGAGCAGGAGTTGGAGGATAAAAAAATGCGTAGCTATTCAGTTGTACCTCCGATATTGTTGGATGCTAGGCAAAGAAAGTTGTGTTACTCTAACAATAATGGACATGTTTTAAATATGGAAAACGAATATAAAGAATGGCAGATAGCTAATCTATGGACTAAATCTGAAAGTGAGATTTTTCGGGAGAAATATTTACAGCATCCTAAAAATTTCGGTGTGATAGCTtcttatttagataaaaaaaccgTTCAAGATTGTGTGCAACATTACTACCTCAGTAAAAAAGCTGAGAACTATAAACAGATGTTAAGGAAGTCGAGACATCGGCCTCGGGCGTCGAGGAATCCGCAGAAAGTTAATAACGCGGCAATCGGGTCGGTGGTCGACGTTTCTAGCACGGGCGTTACGACGAGACTGCAACGCGAACAACAACAGAAGACCGGTGGTGCTAACAATAGCATAGCGGCGACGTCGGCAGGCCAGGCGTCGCAGCAATCGACCGGTGATGCGCCGTCGTCTATGACATCGACGAGTACCACCAACTCGCAGTCGACGCCGAGCGTCAATACGTCAACGAGTATTTCGGTAGCAAGTAGTGCGACGACTGTGACGTCATCGTCGTCACAACagactatttttgtaaattcgACAGTGAATTCAGTGAACAGCGATACAAAGAACTTACAAAAATCGACAGCGAATCCGACATCGGTGTCGACGAGTGCGGTTCAACAGACGACATCCATTCCAATCGTTTCGACTTCTACATCGAATTCGACGGTCATAACGACTTGCCCGTCGACGACCGTCACCCAGACTTCGTGCATCACAACGTCGGTTATGAGTAACGCGTTGTCATCGACGGGCGTCAGTTCGATTTTACAACAGCAACAGCAGACCCCAACGCCGCCCGCCGAACAGCAGGTCCAGGGAGCTCAGTCTATGAACGACAATACCGATCTCAGTGGACAGGATAAGACGAACAGTGACCAATCAGGAAGTGGCGCCGGCAATTCAACGatagaaaaaaagaagaaagagAGAAGAAAAGACAAGGAACTCGCCATGGAAACAAGTGACGACGAAGTGACGGATAATCAAGGTAggctttga
- Protein Sequence
- MSSSSSVTSGDDWIAVSNVVALIIYLVMFCFCFDFRSGQPNDNAGPPPHKQARTALSPPTSRAPSGGYAGSPYPPSNPRDPIRDSLRYVASPYPYPRDPVYRISPQQQQQQHQQQQQQQHLEYIQQQQQQQQQQQQSRPSSDSNVQRTTPQEQHARAIQSVQQQQEHPSSRTSGPPPQPPPPSSSSSSEQQHQQQQHHRPSGEHRNVQPPSAASQCTIDQLRSMQNDKQHQQQTTTEHLVRTSQHQQVEGMRLDQITRDQLSQTQMRQRISLLPPSADYLAQSMARTGNRDLYRHDSHHQQQQQQSSAMASVFGGGAVSQQQANMMQHVQQMDVVSAAGQSFKKIRLGEQQQQKAELHQPLRIDTRDQPGSYNPQVEAISPTPNEHAQEDLAFRTTKDELLQMISKVDRDIALHESQIIKLKKKEQELEEAASKPSIQQEVEEVAQPKHQSLAQKVYAENRKWARTSHLLLDSLGTKVDWPLYNQPSDCPVLQENKRKHQSFKKRLIEYFKKRHAEKEQRESYLIQTYSKLMQEWLRKVERIESSQKRKAKETKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQELEDKKMRSYSVVPPILLDARQRKLCYSNNNGHVLNMENEYKEWQIANLWTKSESEIFREKYLQHPKNFGVIASYLDKKTVQDCVQHYYLSKKAENYKQMLRKSRHRPRASRNPQKVNNAAIGSVVDVSSTGVTTRLQREQQQKTGGANNSIAATSAGQASQQSTGDAPSSMTSTSTTNSQSTPSVNTSTSISVASSATTVTSSSSQQTIFVNSTVNSVNSDTKNLQKSTANPTSVSTSAVQQTTSIPIVSTSTSNSTVITTCPSTTVTQTSCITTSVMSNALSSTGVSSILQQQQQTPTPPAEQQVQGAQSMNDNTDLSGQDKTNSDQSGSGAGNSTIEKKKKERRKDKELAMETSDDEVTDNQGRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -