Vnig004489.1
Basic Information
- Insect
- Venustoraphidia nigricollis
- Gene Symbol
- Trerf1
- Assembly
- GCA_034508555.1
- Location
- JAVRKA010000008.1:6165970-6177984[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-09 2.1e-06 28.3 0.1 2 46 954 998 953 998 0.97
Sequence Information
- Coding Sequence
- ATGGATAACTGGATACCTAGTTACGTTTACAATTTTCTgGCTCCGAGTACAACATCAAAAACACAATCATCCCAACAGTCGAAAGCAACGGGCAACGTTAACAATGCGAATTGCACAGCCGCTGGCAATGCAGCCAATGCTGTTCCTCCAAAACCTGTTGAATGTAACTTATGTCatcgaaaattcaaaaatatccCTGCTCTTAATGGACATATGCGTTTGCATGGAGGATATTTTAAAAAGgatgcagaaaataaaaaatgtgagaaGAAAGAATCGGTAGGACCGCCGCTTCAAACAGCAAGTGTGAGTGTTAGAGCGCTAAtcgaagaaaaaataattaataagagaATAACAAACCCTCAAAATACCACGGCAGCTCCAACGATTGTATCAAGCAGTAGTACTTCGACAACGTCGACCGACGCCAGTAATCGGACAACTAATGCGCCTCCCCTCTTCCCTCTTACGGCAACAACAGTTACAGAAGGGACAACGACAACAACGAAAGTTACGTCTTTTGTTGTACCGGCCCCACCTTCCCAAAATAACACTGTTGTCGATAAGACTCGACGCCATTCTGATGCCGAAAAGTTTACCGTTCCTCGAATTCCGACATCATCTGTTTCATCCACAACGGCTCAACAAGAAGCCGAAGCTCTTGCAGATTTAATAATGAAACGTGGAGCAAAAGTGCAAGTGAAACGAGCAACGTCTGATCCAGGACAGTCACCGCAACAACTTCAAATACAATTTCAACCGACTGGAGATTCATTTTCATTGACTGGAGTGACTTATCAATCAGACGACAGTTCAGGATATTTCTCTCCAAACTTGCAAGATGATGTGTTTCATCAAGTCCAAGATACAATGCTACTTCAAGGTGTCGATGCGGCACAATTAGCAGAAACGATACAATTACAGGCAGCGTCTTTGTTACAAGATCAGACGACCGACGAACAGTTACAAGACATTGCATCACTTGAAGATTATGCTAATGTAACGGCCAGTTTACAAGAAACAGGACAAGTTGAAAATTCTAGTTATTCGGGAAATCGAACCGTCAGTCATGATTTGCAAGCTGTGCTAGACTCTCCATTACCTGAAAGTTTAGCCGAATTTAGTACTTACCATTCCACAAATACTTTATCATCAATACCGTCGCCTAAAGATGTATTGGGTACTTACACATCGACGCAATCCCCAATGCAATTCACTGGCTCTCCCCATACTACTCTGGCAACTCAGAGTCCTCTACAATCGCCTTTAATAAAACACGACTCGCCTGGATTCGCATATCCAACACCACCTGCAAGTCATGAAGGTCAATCACCTGGTTTTGGAAATACCTCATTGTTGCCACTTTTATCCCCTCAAAACTCAGATAATTTTACACAGCCAATGAACAGTCATGGTAACAGAGATCCAGAAGAACCTCCACAAGCTTCTAGTCCATTGTCAGCTGCTTTTTACACATCCACAATGTCGAGTGCTGCAGCTGTTGAAGAAGCTCTTGAAGAAGTTCTACCTGGTGAGACAATTGCACCGGACGATATGTATCCATCCTTGACAAATTCTCCACCTCCTCAAAGTCCTATTTCGGTCGGAATGACACCCGTACAGTCACCGTTATCTAATTTACCTAATTCGACCAGTTCAGTAACGTCACCTCGTCATTCTGGTCAAGTGAcctttccactttcaccacaTTACACTCTTCAATCTCAAATGATGCCAAACAGTGATGATCCATTGCTGTCAAGTAGTCCGAAAGATTTTGTAATGAGGAAACAGTTTGAATTCGGAGGCTTCCAATCTTTTAAAATCGTAAGTGGAAATGGTTTAGTAGATTTTGCAAGTCAAGGTTTGACTGGAATATTAGTTGACAGCAACGGAGAGCTGAAGTTTATTCAAACGGCAGGTGCTTTTCCTACAACGAAGAATGTTGTTTTGGCAACAAACAGCAACTTAAATTCTCTTACATCGCCGGTACAACAAGTAACAATGTTGCAACAAGTTCAACAACAAGCCAATAAAAAAGAAGTTCCAGAACAAACGAACAAGATGATTACCAATAATCACAGTTATGTAAATAATCATCATCACAGAGTTCAGAAATTGAGTCGAACAACTCAATATACAGTACCAGGAAAACCTAATGTCATTCCACGGCCTAAATTACATATAGCTTTTGACAATCTTAAACAAGAGGAACAAGACGATGTATTCCTTAGTCCAACTACcatACCAGCAAGTCCTGTCAGATTTTCTCGTAAGAGACCTCGATCAGAACCACTGCTAGCTGTACCCATAGTTCATCAATCACGTTTGAGAGCATCGAGGGGTAGACCGCCCGGAGCTGCCCCATACACACCACCTCCTATTTTAAACCCTCAACGGACCGGACCTGGGTTATATGCACATGCTAAATGGAAACCTAACGGCCAATTTTCATGCACAACGAAAAACATGAATAGTATAGACAGAAGCTGTGCAAACGGGTATAGCGATTCAATTCCCGAAAGTGACTCAACGCCCCATATCAACGTTGGCACTCAATATCAATGTACTATTCCGCCTTGTATAAACCAAGCTTACAAAGACGACCGAGAGCCCACTTACGAGCATCTTCTGTGGGATCCCGGCATAGTTAACAACTGCACTGATTCCGAAATTGATACATACTTGGAGTTTGCATGCTGTGCTGCCATTCCGGGTGGAGGTAGAAACAAAGAATATGCTCTACATCTTCTACATTTATGTGGTGGAAATATTCACGATGCAATGCTACGATTAATGCAGCAAAGCCCATCGTTGCCACCTGACCATCCTCTTCTAGCCTATCAATACAATGAGAGCGATCGATGGAGTTCTCTAGAAACAGATGCATTTAATCGTGCTCTTTTAAAACATAACAAGGACTTCTATAACGTTGCGAAAGAGGTGGGTTCAAAAACGGTTAAACAGTGTGTTCAGTTTTATTATATGTGGAAGAAGATTTGCGCTGAAGAGCACAGACGCATCAGAGTCGTCAGACAACATAGAGATACAAATCACGTTGGGTCAGAACATGATGAAAAAATGTGGactgaaaataaattacttggAgttaTTGATACAGAACCTCCATTTGCCAATCAAGAACATCGCACCTTTAGCTGTGAATATACTGACTGTTCAGCGAGTTTCAATTCTCGCGCAGCACTAAACGGTCATATAAGAATCCATGGCGGTACGGTCCGTCGGTCTCCCACACCAACACCAAACTCTAACAGTCACCATACCACCAACCATCATAACAACcataatcatcatcatcatcacaACAATCAACAACAATGCTCTTCGAGTACGGAGCACAACAGACGGACAAGTATCACGACGAACAATCACGATCCATCAACATCGTCACAACACGTCCAACAACAAACCCTCAATCACCACGTTCACCACACCGTCGAGGAGTTTCCCTGTAAGATCTGCGGGAAaGTATTTAACAAGATAAAAAGTCGCAGCGCGCACATGAAATCGCATCGGCCCGCTGATTCAGAACCACGGAGACCGAAGGCTGTGCCCTCACCGACGACGTCATTGTCTTACGACACTTCTTCATTGTCACCTACCACGTCTGCTGGAGCTCTCTCCCCACTAATTATGCAATGA
- Protein Sequence
- MDNWIPSYVYNFLAPSTTSKTQSSQQSKATGNVNNANCTAAGNAANAVPPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKCEKKESVGPPLQTASVSVRALIEEKIINKRITNPQNTTAAPTIVSSSSTSTTSTDASNRTTNAPPLFPLTATTVTEGTTTTTKVTSFVVPAPPSQNNTVVDKTRRHSDAEKFTVPRIPTSSVSSTTAQQEAEALADLIMKRGAKVQVKRATSDPGQSPQQLQIQFQPTGDSFSLTGVTYQSDDSSGYFSPNLQDDVFHQVQDTMLLQGVDAAQLAETIQLQAASLLQDQTTDEQLQDIASLEDYANVTASLQETGQVENSSYSGNRTVSHDLQAVLDSPLPESLAEFSTYHSTNTLSSIPSPKDVLGTYTSTQSPMQFTGSPHTTLATQSPLQSPLIKHDSPGFAYPTPPASHEGQSPGFGNTSLLPLLSPQNSDNFTQPMNSHGNRDPEEPPQASSPLSAAFYTSTMSSAAAVEEALEEVLPGETIAPDDMYPSLTNSPPPQSPISVGMTPVQSPLSNLPNSTSSVTSPRHSGQVTFPLSPHYTLQSQMMPNSDDPLLSSSPKDFVMRKQFEFGGFQSFKIVSGNGLVDFASQGLTGILVDSNGELKFIQTAGAFPTTKNVVLATNSNLNSLTSPVQQVTMLQQVQQQANKKEVPEQTNKMITNNHSYVNNHHHRVQKLSRTTQYTVPGKPNVIPRPKLHIAFDNLKQEEQDDVFLSPTTIPASPVRFSRKRPRSEPLLAVPIVHQSRLRASRGRPPGAAPYTPPPILNPQRTGPGLYAHAKWKPNGQFSCTTKNMNSIDRSCANGYSDSIPESDSTPHINVGTQYQCTIPPCINQAYKDDREPTYEHLLWDPGIVNNCTDSEIDTYLEFACCAAIPGGGRNKEYALHLLHLCGGNIHDAMLRLMQQSPSLPPDHPLLAYQYNESDRWSSLETDAFNRALLKHNKDFYNVAKEVGSKTVKQCVQFYYMWKKICAEEHRRIRVVRQHRDTNHVGSEHDEKMWTENKLLGVIDTEPPFANQEHRTFSCEYTDCSASFNSRAALNGHIRIHGGTVRRSPTPTPNSNSHHTTNHHNNHNHHHHHNNQQQCSSSTEHNRRTSITTNNHDPSTSSQHVQQQTLNHHVHHTVEEFPCKICGKVFNKIKSRSAHMKSHRPADSEPRRPKAVPSPTTSLSYDTSSLSPTTSAGALSPLIMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01530134;
- 90% Identity
- iTF_01530134;
- 80% Identity
- -