Vnig008679.1
Basic Information
- Insect
- Venustoraphidia nigricollis
- Gene Symbol
- dnajc2
- Assembly
- GCA_034508555.1
- Location
- JAVRKA010000019.1:3670368-3672236[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00053 0.64 10.7 0.0 3 31 440 472 438 478 0.85 2 2 2.8e-15 3.4e-12 46.8 0.1 2 44 557 603 556 605 0.91
Sequence Information
- Coding Sequence
- atgagtgAAAATAATTCTAACACGTGTCGTGTTGTGGCAGTGCCATTTCCAGTGGTCGATAGAAATGTGGAATGTGTGGGCCCTTGGTTTTTACGGTATTTAAATGCCCGTAATCAAAATACCAGTGAACAGAACATTGTTAGGTTAAATCAAAGTGAAAAAGTAGAAGCTACTGTCGTCTTTGAAGACGATGTTGAGTATTTGAGAAGTTTAGATCCAAAAGAATGGAAAGATCAAGATCATTATGCTGTCTTAGGATTGAAACATTTGAGGTTTAAAGCTACAGAAGATGATCTTAAAAAAGCATATCGTCAGAAGGTATTGAAACATCATCCAGATAAGCGTAAAGCACTGGGAGAAGAAGTCCGATCAGATGATGATTATTTCACATGTATAACTAAAGCTTACGAAATATTGGGAAATCCTTCAAAACGCAGATCGTATGATTCTGTTGATCCTCTATTTGATGATTCGCTACCTTCAACAAGTGATCTAAAAAAAGACTTCTACGCaacatttcttaaatattttgatttaaatgcaCGGTGGTCTGAGAAGAAAAATGTACCAAAACTTGGCAGTACTGATACCTGTCGTCAGGAAGTAGAgcatttctataatttttggTACAATTTTGAATCATGGCGAGAATTTTCATACTTAGATGAAGAGGAAAAAGAAAAAGGTCAAGATAGAGAAGAAAGGCGATGGATAGAGAAACAAAATAAGATCGCTAGAGCCAAAAGAAAAAAGGAAGAAATGTCAAGAATTCGTACTTTGGTTGACATGGCATATAATAATGATCCGCGTATAGCAAAATTTAAGCAAGAAGAGAAAGATCGAAAACTGGCAGCAAAAAGAGCCAAGCAAAGTGCTGTTCAGGCTAGACGTGAGGAAGAAGAAAGAGCACTTCGGGAAGCTCAGTTAGCAAAAGAAAAGGCTGAAGCGGCTGAAAGAGCTCGCATTGAAGCGATTCGTCAAGAACGAGAAGCCCAAAAAAGAGCTCTCAAAAAGGAACGCAAAGCTTTCCGAGATTTATGTAAAAGCAATGATTATTACAGTTCTAACTCGGATGAAGCTGTATCTCATATGGCTgctgttgaaaaaatatgtgaaattcttaaaattctTGAACTGGAACAGCTTAATAAAGAATTGAAAGCGGATGGTCGTCCTGTATTTGTTAGAGTTATGAATGAAACAGAACAGAAAATCGAAGCGGAAAGACAAGCGCTTTTTGAAAAAACCGCTAGTTCGAAATCAAACAATAGTGCAGCAGGGTCTACTAAGCCAACCAATTTAAAATCTGCAAGTCCAGACTGGACAACAGATAACGTTCAACTTTTGATTAAAGCCGTCAATCTTTTCCCAGCCGGCACAAATCAACGATGGGAGGTTGTGGCGAATTTTATAAATCAACACGGTGACACATCGGGTGGAACTTATAATGCAAAAGATGTGTTAGCAAAAGCAAAGGATTTGCAAAAAActgatttctcaaaaaataacttaaaaactgaCGTAAATAAGCAAGCCTTcagtagttttgagaaaaataagaaaaatgtcaaaactGTTGATGATTCTgctatttcaaaaaatgttgaagtAAACGGCCATGGATCAGAAAATAATCAAGACGGCTGTAAAACTGAGAAATTAGTTAGCAAACCATGGACACCTGAAGAACAACAACTTCTAGAGCAAGCGTTAAAGACTTATCCTGCAGCGACTGGTGAAAGATGGGATCGCATCGCTGAATGTTTACCAAATCGTAGTAAAAAAGATTGTATGCGACGTTATAAAGAACTGGTAGATTTGGTTAAAGCAAAAAAAGCCGCTCAGGCTGCAGTCAAACCGAAATCTTaa
- Protein Sequence
- MSENNSNTCRVVAVPFPVVDRNVECVGPWFLRYLNARNQNTSEQNIVRLNQSEKVEATVVFEDDVEYLRSLDPKEWKDQDHYAVLGLKHLRFKATEDDLKKAYRQKVLKHHPDKRKALGEEVRSDDDYFTCITKAYEILGNPSKRRSYDSVDPLFDDSLPSTSDLKKDFYATFLKYFDLNARWSEKKNVPKLGSTDTCRQEVEHFYNFWYNFESWREFSYLDEEEKEKGQDREERRWIEKQNKIARAKRKKEEMSRIRTLVDMAYNNDPRIAKFKQEEKDRKLAAKRAKQSAVQARREEEERALREAQLAKEKAEAAERARIEAIRQEREAQKRALKKERKAFRDLCKSNDYYSSNSDEAVSHMAAVEKICEILKILELEQLNKELKADGRPVFVRVMNETEQKIEAERQALFEKTASSKSNNSAAGSTKPTNLKSASPDWTTDNVQLLIKAVNLFPAGTNQRWEVVANFINQHGDTSGGTYNAKDVLAKAKDLQKTDFSKNNLKTDVNKQAFSSFEKNKKNVKTVDDSAISKNVEVNGHGSENNQDGCKTEKLVSKPWTPEEQQLLEQALKTYPAATGERWDRIAECLPNRSKKDCMRRYKELVDLVKAKKAAQAAVKPKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01530125;
- 90% Identity
- iTF_01530125;
- 80% Identity
- -