Vnig001372.1
Basic Information
- Insect
- Venustoraphidia nigricollis
- Gene Symbol
- cdc5l
- Assembly
- GCA_034508555.1
- Location
- JAVRKA010000002.1:16893312-16893791[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-17 1.6e-14 54.2 1.5 2 46 9 54 8 54 0.97 2 2 7.9e-13 9.6e-10 39.0 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGAGTAATGATAAAAGGAGGCGTTTGGAGGAACACAGAGGATGAGATCCTTAAGGCGGCTGTTATGAAATATGGCAAAAATCAGTGGTCACGAATCGCTTCTCTATTGCACAGAAAGTCGGCTAAACAATGTAAAGCCCGGTGGTTTGAATGGTTGGATCCTAGCATTAAAAAAACCGAATGGTCGAAGGAAGAAGACGAAAAACTTCTTCATTTGGCTAAATTTATGCCAACCCAGTGGAGAACAATTGCTCCAATTGTCGGCAGAACCGCTGCACAATGCCTAGAACGGTACGAATATTTGCTCGATCaagttcaaaaaaaagaagacgGAGAAGATGCTAGCGATGACCCCTGGAAGTTAAAACCGGGTGAAATTGACCCAAATCCTGAAACCAAACCGGCACGTCCTGATCCTAAAGATATTGGTGTGTATTcatctttaaattatataatgggTAATGATTAtaagtaa
- Protein Sequence
- MPRVMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSKEEDEKLLHLAKFMPTQWRTIAPIVGRTAAQCLERYEYLLDQVQKKEDGEDASDDPWKLKPGEIDPNPETKPARPDPKDIGVYSSLNYIMGNDYK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01510553;
- 90% Identity
- iTF_01510553;
- 80% Identity
- -