Vnig022285.1
Basic Information
- Insect
- Venustoraphidia nigricollis
- Gene Symbol
- jarid2b
- Assembly
- GCA_034508555.1
- Location
- JAVRKA010000134.1:73207-80249[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8 1.9e+04 -3.3 0.0 19 35 556 572 551 575 0.80 2 2 3.8e-22 9.2e-19 68.2 0.0 6 89 1412 1493 1407 1493 0.93
Sequence Information
- Coding Sequence
- ATGCCTGTTACAAAAAGCGACAGTAGAAGGAGAAGACGAGAGCCCGATACTATAGTAGATTGTTTAACAGACAGTCCTAAAAgaaCAAAAGTACACGCGCAGAGAAAGTTTGCACAGGGCTGTACATTCAACAGCCCAATTATTACCCCAATTAAAGAAGTCGAAAAAGAGAAAACTAAAGCTGTTGACGTGATACCTCCTGAATTAATTCCTTCAAAACGGCCAAATACAGAAGATTTTTTAACCTTTTTGTGTTTCCGTGGAACGTCTATATTGCCTCCGAACCTAGACTTCTTTAATACAGCTTCACAGAATGCATCATCTACAAGCACTATTAAAAATGAGTCCTCTGAGAAATCTCAAAACGATTCGACTCAGGCAAGTCCAAACCAGCCTGCAGACAGGCCGTTCGTTGCTTTCGGTGTTCGAAAACGGGCCGATCCATTTGTTAGTAGCAGAATGGAACGTAAGAGACGTCATGCTTTGACTGTTCAAGCATTACGGAGAAAATATCAGGACCAAAGATTAGCTAAAATTCGAGCCATTGCTGTAAGTAAAATAGGTCAAAGTTCAAGACCGCCTAGTAAAAGTTTTATATGCACTCGATCTTCTATACGTAATCAgcaagtgaaaaaaaaaccagTTGTAAAACAACCGCCCTCAGCTATCACGAAAcgtcaaataattattaaacgtAGAATGTGTTTGAGAAGTGGAGGACGATTAAATCCCAGAGAAATTATAAAGCCAACTAGAAGAAAAGTTGCGCCTAAAAAAGAAAAGGCTAGTAAGAAAAAGACTGAAACGGAATCTGAATACTCGTCTGATGATGATCAGCCCTTAGTTAAAACAATCAGCAAATTAAAATCCAGTAAAAAAAACACTGCCAGTAAAGTGGCGAGAAAATCAACTAATGTTGTTGTAAAACCGGCGCTTACTCAGAGATCCACTCGTTCTCATCCAATAGAACAGACAGTATCTCAGAGGCCAAcaagaaaaacaaaagaagCTGCTGCATTGTACATGGAGCTCTTAGGCCGAAAGCTTGTTTCAGAAGCGGAAGCAGATGAGGACAATATGTCCATTGATAGCTTTCCTGAATTACCCAATGTGAGGCGCGCTGAGCAGCgcgaaaatgaaattaaagcGCAGTCAAAATTGAAAAGAGACAACAAAATAGTGACGCGAAATAGCGCGGAAACTAAAGCGAAAAACAATCAAACTACGAGAAACAAAATTAAGGATGCTAGTGAAATTAAAACAAGAGAAGCgactaaaaaagaaattagagCAAGAGAAGTTATGAAAAAAGAAGATAAAAAATCTAAAGAAATAAGTGTGGCAGAgagaaaaattaaagaaataaaacaggaagagaagaaaataaaagaaagtacAAAAGCcgacgttaaaaaattaaaagaagtaGCAAAGCAGGAAGATAAGAAAGTGaaagaaacttcaaaaatcgaagataaaaaagttaaagaaatttcaaaaatcgaagagaagaaagctaaagaaatttcaaaaaccgAAGATAAAAAAGTTAGAGAGTTAGTTAAGCtggaagataaaaaaacaaaagatactttaaaaacagaaaacaaaaaaaatagcgaagaagaaaagaAAGGGAAAATTAATTTGGAAGTAGAGGATAACAAAATTAAAGATATGCCAAAagtaaatgataaaaaagttgaaattttaaaaatagaaggtAAAAAAGTCAAAGATATGTCAAAAATAGATGATAAAAAGATAAAAGATAGAATAGAAGATAAAAGACTAAAAGATATTTCGAAGATAGAAGAGaagaaaggaaaaaatattttgaaggtagaagataataatatcaaagatactttgaaaattgaagataaaaaaattaacaagatcGTACCAATAGAAGATAAAAAACCGAAAGAACAAATGAAAACTGAGgatagaaaaatacaaaaagttgTAAAAGGAGATgggaaaaaaaacaaagaaatgatCATTGTGGAGGATAACAATGTCATTAATCTTTCAAAATTAGGAGATAATAAATTGACAGAATTAAAAGAAACTGCATCCAAATGTAGTTTAAAATCTAACGAATCTGTGAAAAGTAAAGATACATTGAAAGAGAAAAGCTTAGTAAAAACTCTCAACATAACAAAATTGAAACCTGTGAAAAGTGAAACAGATCCAAAAACTAAGGAAGTCATCAAAGCCGTCGCAAGTTCTGAGGTAAAAACAGAAGTGaaggaaacaaaaaatgttccaaACAGTGCTCTGCTACTTGAGAAAGAATCAGCTAATAATTCGCTGATTCCTGAAATTAGCACAAAGAAAAATTACAGGTCATTATCAAAGAAACGAAAAGAACCTTCACCTTCACGAGAAATACCAATTAGTAGACTAGATGAAATAAACATTAGAAAATTAGAACAATTCTTTAGTGATTCAGATGAAGAGCCTCTAGCTAGTAAAATAGTCAACTCTGAGAAAGATATCACGAGACCTGCCAAAAAAATATGCACCGATAAAAAGAAGACTGTAAAACCCAatgtaaatcgaaatattttaaacattattgAAAAGAATAAACCGCTTTTGCTTACAAAAgacgaagaaaaattaaaagattcaattgaaataaaacaaataagagAAAGTCCGTCTCCGTCATCTGATGATGAAGATGAGAAAGCATTTAGAGGTTTCTTGAAGACTGAGACTCAGTCTAAAGTATCTCAGTTTGATTCCAAATGTGTTCTGAGCAATTTTAGTTCAAACCATTCAATGTTAGATTCGTCAGATTTGCTCTGTAAAGATATTGATCGCACTTTTGGTAAAGGGAAAGTCAATATGTCAAACGCACAAATAGAAAAGTGGCTGAATGATGCGGACGAAGAACTCAAAAAAGGATCGATAGACAAAGATgatattatagaaataaaaacatcCGACACTCCTGAAATCATAAAAGAAATTATCCCGTTACCCGAACCTCCGGTAATTGCGGCTGCGCCGGTCATAAAACCAGATATTCAAAGACCTCCGGCGCCTATTGAACGTCGAAGCGTATTCCAGCAGCGAAGGCCTATAATCAATAAGTCAAAAGAGCGCGCTGAGAAAACACCAAACACTAGCGCGTTTTCTCCTGAAAACGAAAGTAGTGTTTACGCATTTGAAGCTGAGCCGGACTTACCCGTCAATACGCCTTTCCGTCGTCACAACAGAAGGTCATCGAGCACAGCCACTTCAAAATCAGAAGACGAAGCTGCTAAATTGGAAGACGACactaaaaaactaaacaaaataagACTGCCGACTGTGTTTAAACCGGAAGCGGTAAAGCCGTCTTTGAATAAAGAAGTTTCTTTGACACTTTCGACCGAAGACAACGGATGTGCTTCTATTGCGGTTCAAGTGAATCTCGACGGTAACATATCGGAACAAGTTACGCTCGATGACAGTTTGGAATGTTCGGGGCAGGCAGATACCAATAATGATGGTgatgggcacctattttatatacCGCTACAACCTGGCAAAGAGTCGTCTTCTGACTCGCAAGTGATTCAAGGAGTTGCAGTGAAGTTGGGCACCACAAGTGCAGGAGGTTCGAATCAACGCGTGATAATGCAAGCCAAACTTGTGACAAAACCGAGTACAAGTCAAGGATTCATTCCCGCTAATAGGAGCCTGTTGCCCGTTCAGACGAAAAGTAGTTCGGCAACAATGTATCCACCAGTCGGGACAGTGCAGCCGTTTCGCACCAAACCTATTGAAACTAAACAGCCTCTAAAAGCAGACAGTCGTTTTATGAGTGATACATCTCAATCTAGTGACGACATTAAATCAGATAAATTTAAATTCGTGCCGACTTCACCGAGTGCGTCTTCATCCTCTAGCGCGAGACTGAACAAAAAACCAGCAAAACCGAAATCTCGGTGTTTGGAACTGTGCACTGCGACGATTACATCGCAGTTCCCGAGTTCGAACGGTCCTGCACAAATGGTCGAAGCGCCGACGTTTCACCCGACTGAACGCGAATTCCAAGATCCACTGGAGTACATCGATAAAATTAGATCGATGGCTGAAGGATTTGGGTTATGTAGGATCATACCACCTACAGGTTTCAAACCAGAATGTAAAGTTAGTGACGACATGCGATTCACGGCTTACAATCAGTATGTACATAAGATGCTGCATAGATGGGGTCCCAATTCGAGAGAACTTACGGCTATCAGAaaatatttggcaacacaaaaTATCACTTTGGCACAAGCTCCATGGattggAGGAATGGAAGTGGACCTGCCAAGACTGTATCAATCTGTGCAATCATTGGGTGGCTTAAAAGAAGTAATAGAAAAGAAGAAATGGCCAAAAGTTGCGGAAATAATGCGAATACCAAAATCGGCTCAGGATCGGTTAACAAAATTAGAtgatatttattgtaaatatttattaccatACGATACGTTATCGCATGACGAGAGACAAAAGTTACTCGATGATGTAGACGTAGAGTGGGAAAAGAAGAAAATCGCAAATTCGCAGTCTTTGACTTCAGACAATTTCGAAGAAGAAAACGAAGATACTGATGCGAATGAATGCATTGTACGAGGTCGTAGCATGGCCTTGAATGCATTCTATCGCATAGCAAGGAATACGATGAGTATGTTCTTCCGTAGCACCGAGCCATCGGTTGCAGAAGTGGAACAGGAATTTTGGAAACACGTAAACGAGCGTACCAATCATTTGTGTGTCCATTCTGGTTCTATCGAGACGGGGGGTTATGGATATGGATTCGCATGCACCAAAAATAGTCCGTTTGCTCGTCATCCATGGAATCTCAAAGTGCTAACGAATAACAGTAGCTCAATATTGCGTTCAATGGGTCCTATAATGGGCGTCACGGTACCGACTCTGCACGTCGGTATGGTTTTCAGCGCGTGTTGTTGGTACAGAGATCCTCACGGACTTCCGTGGCTTGAATATTTACATACAGGCGCCAATAAAGTATGGTACGGAATACCGGATTCTTTGAACACTGCTTTTCGACAAACACTAAACAAAGTAGTTCCGAATTTGTGCCGTCAAACGAACGTTTGGCTCCCGTCCGATACGGCCATGGTTCCACCGAGCCTGCTGGTCAGTAACAATGTTTCTTTGTGTCGTACTGTTCAAGAACCCGGCCAGTACATTGTTATTTTTCCAAAAGCGTTCACGTCCAGTCTGTGTACTGGCTACACGGTTTCTGAAAGTGTATTCTTTGCGCAAGCGAATTGGCTTGAAAATgcagaaaatgtttttaaggagCTACGAGAGAGCAGTGAGCCTTCAATGTTTTCATTGGAACGCTTATTGTTAAGTATAGCAGTAGATCCGCGATGTAATTTAGACGTAATGAGACGAGTTTTACCTGGAGTACAAAACATCAGGGATAGAGAAACTGTGGACAGAGATAAACTAAAGCAATTGGGTTTAATTACGACGGAGCGGCTACCGCAGTCGAATAGGAAGAAGAAGAAAGCCGATACAGACGGAGAATATTTGTGCGAAGTCTGTAGAAGTAATTTGTACGTATCTCTCGTAACTGAAACGAACGACGACGATGTTTATTGCTTACAGCACGCGGCCGAGTATTTGTCTAGTAATAAGATATCGAGAGACAATTGTAAATTAATGTATTCGTACACCGAAGAAGAACTGAACGAAATTGTCGATAAACTGATTAGtgcaattgaaaataaaagtcAAAAGAAATGTGGCAAATCGAATGTCCAGGCTTTGTAA
- Protein Sequence
- MPVTKSDSRRRRREPDTIVDCLTDSPKRTKVHAQRKFAQGCTFNSPIITPIKEVEKEKTKAVDVIPPELIPSKRPNTEDFLTFLCFRGTSILPPNLDFFNTASQNASSTSTIKNESSEKSQNDSTQASPNQPADRPFVAFGVRKRADPFVSSRMERKRRHALTVQALRRKYQDQRLAKIRAIAVSKIGQSSRPPSKSFICTRSSIRNQQVKKKPVVKQPPSAITKRQIIIKRRMCLRSGGRLNPREIIKPTRRKVAPKKEKASKKKTETESEYSSDDDQPLVKTISKLKSSKKNTASKVARKSTNVVVKPALTQRSTRSHPIEQTVSQRPTRKTKEAAALYMELLGRKLVSEAEADEDNMSIDSFPELPNVRRAEQRENEIKAQSKLKRDNKIVTRNSAETKAKNNQTTRNKIKDASEIKTREATKKEIRAREVMKKEDKKSKEISVAERKIKEIKQEEKKIKESTKADVKKLKEVAKQEDKKVKETSKIEDKKVKEISKIEEKKAKEISKTEDKKVRELVKLEDKKTKDTLKTENKKNSEEEKKGKINLEVEDNKIKDMPKVNDKKVEILKIEGKKVKDMSKIDDKKIKDRIEDKRLKDISKIEEKKGKNILKVEDNNIKDTLKIEDKKINKIVPIEDKKPKEQMKTEDRKIQKVVKGDGKKNKEMIIVEDNNVINLSKLGDNKLTELKETASKCSLKSNESVKSKDTLKEKSLVKTLNITKLKPVKSETDPKTKEVIKAVASSEVKTEVKETKNVPNSALLLEKESANNSLIPEISTKKNYRSLSKKRKEPSPSREIPISRLDEINIRKLEQFFSDSDEEPLASKIVNSEKDITRPAKKICTDKKKTVKPNVNRNILNIIEKNKPLLLTKDEEKLKDSIEIKQIRESPSPSSDDEDEKAFRGFLKTETQSKVSQFDSKCVLSNFSSNHSMLDSSDLLCKDIDRTFGKGKVNMSNAQIEKWLNDADEELKKGSIDKDDIIEIKTSDTPEIIKEIIPLPEPPVIAAAPVIKPDIQRPPAPIERRSVFQQRRPIINKSKERAEKTPNTSAFSPENESSVYAFEAEPDLPVNTPFRRHNRRSSSTATSKSEDEAAKLEDDTKKLNKIRLPTVFKPEAVKPSLNKEVSLTLSTEDNGCASIAVQVNLDGNISEQVTLDDSLECSGQADTNNDGDGHLFYIPLQPGKESSSDSQVIQGVAVKLGTTSAGGSNQRVIMQAKLVTKPSTSQGFIPANRSLLPVQTKSSSATMYPPVGTVQPFRTKPIETKQPLKADSRFMSDTSQSSDDIKSDKFKFVPTSPSASSSSSARLNKKPAKPKSRCLELCTATITSQFPSSNGPAQMVEAPTFHPTEREFQDPLEYIDKIRSMAEGFGLCRIIPPTGFKPECKVSDDMRFTAYNQYVHKMLHRWGPNSRELTAIRKYLATQNITLAQAPWIGGMEVDLPRLYQSVQSLGGLKEVIEKKKWPKVAEIMRIPKSAQDRLTKLDDIYCKYLLPYDTLSHDERQKLLDDVDVEWEKKKIANSQSLTSDNFEEENEDTDANECIVRGRSMALNAFYRIARNTMSMFFRSTEPSVAEVEQEFWKHVNERTNHLCVHSGSIETGGYGYGFACTKNSPFARHPWNLKVLTNNSSSILRSMGPIMGVTVPTLHVGMVFSACCWYRDPHGLPWLEYLHTGANKVWYGIPDSLNTAFRQTLNKVVPNLCRQTNVWLPSDTAMVPPSLLVSNNVSLCRTVQEPGQYIVIFPKAFTSSLCTGYTVSESVFFAQANWLENAENVFKELRESSEPSMFSLERLLLSIAVDPRCNLDVMRRVLPGVQNIRDRETVDRDKLKQLGLITTERLPQSNRKKKKADTDGEYLCEVCRSNLYVSLVTETNDDDVYCLQHAAEYLSSNKISRDNCKLMYSYTEEELNEIVDKLISAIENKSQKKCGKSNVQAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01529864;
- 90% Identity
- iTF_01529864;
- 80% Identity
- -