Vnig021742.1
Basic Information
- Insect
- Venustoraphidia nigricollis
- Gene Symbol
- gt
- Assembly
- GCA_034508555.1
- Location
- JAVRKA010000119.1:98631-99536[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-13 6e-10 39.5 6.8 2 58 231 287 230 291 0.93
Sequence Information
- Coding Sequence
- ATGAAAAGATCACATTCACCATACATGATGAGCAGACCATCTTCAAGAGATAACTCTTCTGGTGAAGTACAGGCTTTAGATTTGAGTAAATCAAAAAACGAAAAGCAATCTTCACCGCCTCCAATATCGACGGTCATCAAATCTGAGCCGACGTCTCCAGACAAAACATCGCTCTGGCCAGAAGCCGTCGAACAAACAATAAACTATGATCCACCGCGTTTCCAATACTTTTCACACATTTCACCCCTGTCTATAGAAAAAGCAAACGCCAGATCACAATCTATAGAGATGCCGTTCGTTCAGTCACAACTTACAGTAGAACCATACTTTCAACCACAATCTACTACTGCGGAATCACGTATTCAACCACAACGTTCGCTCGCGATGGATGTGTCGTCGAGCACTAGAAATTCACCTGATTCCTCGGGAAGTTCTCTGCTGGTACCTGGTATCGACTTAGTACATCCCTTGCCACTTTTGTCCCCGTCTACAGCGAAACCAACCCGACCGTTTAAAGCGTATCCTAAGGAAATAATGACGGATGGCGCGTTTTATGACCCAGAAATGCAaatcaaatatgaaaaattcaagaaagattttttttcgaacaCGACTAACTATACACAATCTACAAATCCAAAAATGAGACGCACCAATACACGCACACATTCCGAAGATGACGGTGGAAAAGATGAAGCGTACAGAGAAAGACGAAGAAAGAATAATGATGCTGCGAAACGTTCGAGAGATGCGAGACGTAAAAAAGAAGACGAAATCGCTATAAAAGCAGCTTTTCTAGAAAAAGAAAACTTAGAACTGAAAgcgacaataaaaatattatatgaacaCATTGACACGTACTGCAAAAGGACGCTCGGAACAGCTGTCACTAAAATGTTAAACTAA
- Protein Sequence
- MKRSHSPYMMSRPSSRDNSSGEVQALDLSKSKNEKQSSPPPISTVIKSEPTSPDKTSLWPEAVEQTINYDPPRFQYFSHISPLSIEKANARSQSIEMPFVQSQLTVEPYFQPQSTTAESRIQPQRSLAMDVSSSTRNSPDSSGSSLLVPGIDLVHPLPLLSPSTAKPTRPFKAYPKEIMTDGAFYDPEMQIKYEKFKKDFFSNTTNYTQSTNPKMRRTNTRTHSEDDGGKDEAYRERRRKNNDAAKRSRDARRKKEDEIAIKAAFLEKENLELKATIKILYEHIDTYCKRTLGTAVTKMLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -