Vcam025323.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Venusia cambrica
Gene Symbol
nfxl1
Assembly
GCA_951394065.1
Location
OX596069.1:7870224-7872695[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 2.9e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.014 2.1e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 20 1.9e-07 0.0028 18.3 15.5 3 19 186 202 185 202 0.95
4 20 2.8e-06 0.04 14.6 11.8 3 19 239 255 237 255 0.90
5 20 1.1 1.6e+04 -3.3 0.7 6 10 280 284 279 284 0.91
6 20 2e-09 2.9e-05 24.6 13.0 1 19 290 308 290 308 0.99
7 20 8.4e-06 0.12 13.1 18.9 3 19 345 361 337 361 0.86
8 20 2 2.9e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 20 2.7e-05 0.38 11.5 19.5 1 18 395 412 395 413 0.97
10 20 2.3e-08 0.00034 21.2 16.9 1 19 422 440 422 440 0.99
11 20 0.0002 2.9 8.6 6.4 9 19 488 498 486 498 0.89
12 20 0.00073 10 6.9 7.8 1 12 508 518 508 518 0.96
13 20 0.35 5e+03 -1.7 3.3 14 18 547 551 547 552 0.85
14 20 0.24 3.4e+03 -1.2 1.4 7 12 567 572 567 582 0.79
15 20 2e-05 0.29 11.9 4.7 1 11 588 598 588 599 0.97
16 20 0.46 6.7e+03 -2.1 1.3 14 18 612 616 612 617 0.85
17 20 0.0022 32 5.3 14.2 1 18 628 645 628 646 0.87
18 20 2 2.9e+04 -6.5 3.4 9 13 652 656 652 656 0.71
19 20 1.9e-05 0.28 11.9 11.7 1 18 687 705 687 706 0.89
20 20 1 1.5e+04 -3.2 1.0 5 10 735 740 735 740 0.93

Sequence Information

Coding Sequence
ATGGCGCGCCGGTACCGGGACGCAGCCGCGAAGCTGCAGCAAAACGTGCAGAAACACCTTAAGGATATGAAGGACCTCTCGTCTTCTGAAGATGAGGAGCCTTACGAGCCCAGCGTCATTGAGGGAATGTTCCAAAGCTACTGGCGCGGCGGCGGAGACACACAAATGCTGAACAGAACCAAAAACCTACTTGAAGAAGCGATCAGCGGCCGGTCCGTCGCATGTCTCATCTGCATCAGCTCCATCAAACGCAACCATGCCATTTGGACTTGCGAGCATTGCTTCTCATACTTCCACCTCCCTTGCATACAAAAATGGGGAAACGACAGCATTAGTTTACGCAGCATTCAACCTGATGCGCcgataagtatatataaacCTGACAAAATCGAATGGTGCtgccctaaatgccggaattccTACAGTAAAGAACAAATCCCCAGGAAGTACAGGTGTTTATGTGGTAAAACTGATAATCCACAAGTCCATCCATGGTTAATACCTCACACATGTGGGGAAGTTTGTGAAAAGAGGTTGTCAACTGGAGATAACTGCAGACACAAATGTCTCCTCCTGTGTCACCCTGGACCATGCCCTCCGTGTCCGCAGACTGTAAATGGAGTATGCTATTGTGAAAAAGAGCGCAAGAAAGTCAGATGTAGCACTGCAAAGTGGTCTTGTGGACAACAATGCAAGAAAACATTACTTTGTCAGACTCATGTGTGTCAACTATTATGTCATGAAGGAGAATGTTCACCATGCACTTACACCAGCATACAACCATGTCTGTGCGGGACTGAGAAGACCAAAAGACCCTGCAATGACCCATTCTGGCACTGCAAAAAACTTTGTAACAAACCATTCTCATGCGGTTACCACAAATGTGAAAAAGTATGCCATTCAGGGAGCTGTGAGCAATGCCCAAACTCTGGCATGAGGTCATGTCCCTGTGGAGCCAACAAGAGATATGTCCAATGTCCTGATATCATGGAAACCTGTCTTGGAACTTGTGGAAAAAAGCATGAAAACTGTGAACACAGCTGTCCTGAGAAATGTCACAAAGGTTCCTGCCCTCCCTGCTCAGTTCTGATCCAAAAGAGATGCCTGTGCTTGACTCATACCAGATCCCTACCTTGCAGCAAGGAGTTCAAATGTGAAACCAAATGTCGAGGAACCAGGCTATGTGGTAAACATGGCTGTGCACGAAAATGCTGCGGTGGAAATTGCCCACCATGTGAAAAGACTTGTGATAAACCATTACAATGTGGCCGACACAAGTGTACAACTATCTGTCACCATGGTCCTTGCTACCCCTGTCCCATGGAATCCAAGGTCCCATGCAAATGCAAAGTTACTTATGTAACTGTCCCATGTGGCAGAGAGCGGTTTACAAAACCACCTAAGTGCAGCCTTCTTTGCAAAGTCAAGTACAAATGTGGCCACATTGAAGAAAATAAGCATTCCTGTCATTTTGGAGACTGCCCTCCATGCAAAGCTATTTGCTACAAAACATACCAGAAATGCGGGCACAATTGCAAAGCTACATGCCATGAGTTTAAAGCTGTTGTCTTTAAGCAGGTAGAGAAGCCTGCGACACCTTGGGAGGTTCAACCTCCTAAGACCAAGATCATGACTCTGGAATGCCCTCCATGCAATACACCAGTTACAGCCATCTGTTTCGGGGAGCATGAGACTGAGGAACAGCCCTGCCACACAGCAGGTAGAAGACCCTGTGGCAGACAATGTGGAAAACCTTTAGCTTGTGGAAATCATAGCTGTACTTTACTCTGTCATTTGCATACACCTGATGCTGAATACCCAAATGTCCCTCACAATTGTAGGCCTTGCAATAAAGAGTGTGTTAAACCGCGTCCAAAAAAATGTTCTCATAAATGCCCCATCAGACAATGCCACCCAGGACCCTGCCCTCTGTGTGATGCCATGGAACGCATACCATGTCACTGTGGTATCACCGAGCTCTACCTACATTGCAGGGACTACAGCTCAGCTACTGAAGAAATGCTCTCTTGCAAACAACAATGCCCTAGAAACTTAGAATGTGGTCACCGCTGCAAAAATAACTGCCACTCTGGCCTTTGTGGCAACCAGGTGTGCACAAAAAAAGCTAAGGTACATTGCCCCTGTAGTAACTTGAAAAAGGAAGCACCATGTAATGCCATCAGAAGTGGTGAGGCTAAAGTCACTTGTAACGAAGCTTGTGAAGAGAAAAAGTCTGCTGCAAAACTGGAGAGTGAAAAAGAACAACGAAGGTTAAAGCAGTtggaagaagaaagaaataagaAAGAACTGGCTGAATATGAATGGAAGCTCAGcggaaaaaagaaaaaatacaaggAAAAGAAGGTTACAATCAATAAGAATGAACATAACTTTGTTCAAAGATACTGGCTGCCTATACTATCAGTCATTGTTGTTTTGATGGctgttatttacattatttatttgcaataa
Protein Sequence
MARRYRDAAAKLQQNVQKHLKDMKDLSSSEDEEPYEPSVIEGMFQSYWRGGGDTQMLNRTKNLLEEAISGRSVACLICISSIKRNHAIWTCEHCFSYFHLPCIQKWGNDSISLRSIQPDAPISIYKPDKIEWCCPKCRNSYSKEQIPRKYRCLCGKTDNPQVHPWLIPHTCGEVCEKRLSTGDNCRHKCLLLCHPGPCPPCPQTVNGVCYCEKERKKVRCSTAKWSCGQQCKKTLLCQTHVCQLLCHEGECSPCTYTSIQPCLCGTEKTKRPCNDPFWHCKKLCNKPFSCGYHKCEKVCHSGSCEQCPNSGMRSCPCGANKRYVQCPDIMETCLGTCGKKHENCEHSCPEKCHKGSCPPCSVLIQKRCLCLTHTRSLPCSKEFKCETKCRGTRLCGKHGCARKCCGGNCPPCEKTCDKPLQCGRHKCTTICHHGPCYPCPMESKVPCKCKVTYVTVPCGRERFTKPPKCSLLCKVKYKCGHIEENKHSCHFGDCPPCKAICYKTYQKCGHNCKATCHEFKAVVFKQVEKPATPWEVQPPKTKIMTLECPPCNTPVTAICFGEHETEEQPCHTAGRRPCGRQCGKPLACGNHSCTLLCHLHTPDAEYPNVPHNCRPCNKECVKPRPKKCSHKCPIRQCHPGPCPLCDAMERIPCHCGITELYLHCRDYSSATEEMLSCKQQCPRNLECGHRCKNNCHSGLCGNQVCTKKAKVHCPCSNLKKEAPCNAIRSGEAKVTCNEACEEKKSAAKLESEKEQRRLKQLEEERNKKELAEYEWKLSGKKKKYKEKKVTINKNEHNFVQRYWLPILSVIVVLMAVIYIIYLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00857272;
90% Identity
-
80% Identity
-