Vcam023026.1
Basic Information
- Insect
- Venusia cambrica
- Gene Symbol
- zfy1
- Assembly
- GCA_951394065.1
- Location
- OX596065.1:8852719-8867289[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.6 1.2e+02 4.0 0.3 2 23 6 27 5 27 0.96 2 12 1.4e-07 1.1e-05 26.3 0.6 2 23 1103 1124 1102 1124 0.97 3 12 0.0034 0.27 12.4 2.4 1 23 1130 1152 1130 1152 0.98 4 12 3.7e-05 0.0028 18.7 3.6 1 23 1158 1180 1158 1181 0.96 5 12 0.0019 0.14 13.3 1.1 1 23 1191 1213 1191 1213 0.98 6 12 0.0038 0.29 12.3 3.6 2 23 1219 1241 1218 1241 0.96 7 12 0.01 0.77 11.0 0.3 2 23 1257 1277 1256 1277 0.97 8 12 4.3e-05 0.0033 18.4 1.3 1 20 1283 1302 1283 1305 0.92 9 12 0.0073 0.57 11.4 2.2 1 23 1313 1335 1313 1335 0.99 10 12 0.0059 0.46 11.7 7.2 1 23 1341 1363 1341 1363 0.98 11 12 8.1e-06 0.00063 20.7 1.1 1 23 1369 1393 1369 1393 0.97 12 12 0.00038 0.029 15.5 5.7 1 23 1399 1421 1399 1422 0.96
Sequence Information
- Coding Sequence
- ATGGACTCGCTCGTGCAGTGCCCCGTGTGTACTCTGTTCCTGCACAATGGCATGTCTCTCGAGTCCCACCTCGACACTCATCCTAAGGACCAGGTCATCAAGGCTCTTTGCTGTATTGCCAAAACTAGCTCCAGCTGTGGTAGCAGCAGAACTGCCACTCCAGCGAATTCTGAGAGATCCTACCGGAGTCGATCTAGGACTCCAATCACAGAGGACAGTGGTACCAATTCTTGGAACCCATCAAAAGACCAGGATCGCTACTGGGCAAGGACACCCAGTGGCACATCCAGCTGGACTCCTAGTGGTACCTCCAGTCGGGGAGGCAGCCGGACCCCTAGCAGAACCAGGACACCTAGCAGAACACCAAGTAGGACTCCCAGATCACAATCATCTGCCAATGTTTCAAGAAATTGCACTCCCGTTATGAGAATGGTTGATAATTTAGGGTTTGAAACCACAACAGCTAGTAATTCAACATCAACCTCACCATCTCGGCATTGTAGCTCACCAATCCCATTGGTGATGAAACAGAATAAGCCACTGAGAAAATACCCACCAGTGTCTGTACCAGAGTTTGAGCAGCAGTATGTGGACTATACAGATCAGTCTGAGGAGAGGGAAGTCAAGTATTCTCGCAGTGCAGAGTATGATGCCCTggatttaaataatgtatattccTACAATGTGCCAATATCTGGAAACAGTTCTAAAATACAGCCAACATCATCTCAGGTATCACCGAAAAAGAAAATAGAGCTACCTAAAGTTGGTATCCCTGCTAAGTCAAATAACCTACTCAACcttgttaaaaataacattagtgCGAACCAGTGTTTGCTTCCCTATGTTGCAAGCCGTTGTACTCCATACCAGATGGTACCAAACACTCCTACTTTTGTCCAAAAGAATATACAAAATAGCATAATTTTGGGGACCGGTTTACCCAACACCCAGGTTCAGTTTGAACCCAAAACTGTACAGCCTGTAGTTCAAAACCACTTTAATCTGAACCCTGGATCATTCACCCCTGGCACCACAGTGGTCACCCAGAACTCTCAGTACTTCTACCAAGAGATGGTGCAAAATGTTCCTACAATAACACCTGTGTTTTCTAGCCATGAGAACATAACTAACATAGCTCAAACCAGCTCAGAATGTACAAGAATGTATCAGAATGTGATGCTCGTAGACCAATTTGGTAATACATCATGTATGTATACACCCCAGAGTGTACTCCCAAAGCCGTGTGCCCCTCCACTGTTTACAGAGAACACTCGATCAGTGAACACATTCATTCAAAAGCAAGGGCCGATTAAGAAGGATCCAAATAAGACACTTATAATCGAAGTGGGTCCTATCGTGCCACAGCGAGAAAACCCGCGAGCCTCCACATCACATTCTGTGATACAATCAAGGCCTTACCACAATGTTCCAGTAATATTCCCTCCTAAACCTGAGGCTCCCAGTATATCTATCACTGAGAAGGTTGAAAAACCTGATGGACAAGGCACAAACAGAGGCCTCAAGATCTTGAGCAACATCAAGGTTGAAGTTCCAGTGCAACATGTGAAAAGCATGATAAACACAGTGATGGATCTGACCGGTTCCGAAGACGCAATGTACCCTATTAGAAGCAGGTCTCCCGAGAGAATCTTGCCAGACTTGGACGTCAACAAGGAAAGAGTTCTGGATAATTTCGCGCAGCCATTTACCGCCGATGGCGAAAGCTCGCACTCCTTTGAACTGAAAAAGTTCGCTCATGCTACCTCAAGTAAAGACTTACATAGTAAAACTAGCAACttagataataaaatagaaacCGACTTTGGCGACAGCTGTCCTGTACCCGATCTTATTTGTAACGAGAAGCCTTCCATTTCTCCGTGCAGTGAGCTGTCGGAGAGCGGCGATAACTCGGTCGACCGCGCCCCACCTTCTCCTAAACCACACTCCAGCGGAGTCATTGTGAGAAAGCAAGATGTAGATTATAAGAAGAAATCGCCAATGAAAATAAGACTGAACAACATCTTCCTCAAGAAGAGCAAAAAGTTGCACATAAAGAACGCTAAAACCACCGCCCACGGAGTGGAGATCAGGCCCGTAGCGTGTTCGTCCAGAAGCCTAGCGCCTGAAATCTTTGCTGCCGCGATGAACGCTTCTCCGACAAGGAACGAGATTTCCACACTCAAAACTATATCTATTGAAGAGATCCGAGAGAAAGACGAAGCAAGCTTCGAAGGAATGGATGCAGTAGAAGATGTCACCCTCCCCCATCCGCCGGCAAAATCCGAGGTCGCGGTCAAGGAGGAGTATACTTCCAGCAACGAATGCGCGTTTAGCAACGAAGCGCCCGGCCCGGTCCGCCCTATGGGCTCCCTTGACCCGCTACGGCCCATATCTGTCAGCTACGGTAGCATGTCGCCTACTGATTTCGACGACGAAACCAGCAACCGCGAATTACTCGACCTAGAAGGTGCAAAGAACAAACAATTCGTCAGCATGATGAATGATAACTATTTCGGGGACAACATCTATGCGGATTACTTTACCCCCGATAGGGTTGAAGCGTTTGACGACAAAGGGCCCACGGTTTTTAAGGAAAATAACAAAGAGGCGTTTTCATGTAATATTTGGGGGGAGCCTTCAACAAAGGAGAATGAATTTGTTCTTCCAAACTTCATACATGAGAGTTATAAGATAGCAGACAATGGGTCGGAGTATGCTGATGGGGCGGAGGTTAGGGAAGAGAGCAAAGCGGACGTTCCGCCACTGAATATCTGTGCTGATGAGCGGATGCCGCCGCGAGGAGAGATCAGCGGACAAGAAAGCAATGGAGAGACCTCATGGCATGgaATGTACCCTGAGGCGGCCCCAGCGGAGCCCTACGACCTGATGGCTCGCGAGAGTTGGGTCTCCGATGGCTCTGAACTCGACGCCACTGAGAAGAGAGACGCACTGGAGGCGGAATTGGTGCAACCAAGGTCGCGTTTGTTCAAGGCCCACTGCCCCCCCACCGGTTCCAACACCACCTACAGCCGTCTGCTCACCGCCAGGACCATCAAGAAGGAGAAAGAGGAAATGTCTGCAGGCAACATTCTGAGCCTAGACACGAAAGGCAGCATAACCTCCACTATATTAGAGGTGTACGACCCCGAGGGTCTGGTGGAGTCGAAGCCGGCGCTGGGCAGCCTGCGCACTCTGCTTGGCAAGGAGAAACGGAAACGCAGGGACTTCGTGTGTCCCACGTGTAAAGTTGACCagATAACGGAGCCTGCGTTCACAGCACATCTAAAGTTCCATCCCCTGGAATgtcccacttgtgggaagttCTTCTCTCGACGAGCCAACCTGCAAATGCATATCAAAACACACCTCGGGATCAGAGAGTACAAATGCGAGGTCTGCGAGAAGCGGTTCATGACCCGCCAGAAGCTGGGCGAGCACCATAACATACATACAGGCCGCGCGCCCTACAAGTGCACAATCTGCGACGAAACCTTTAGGAGGTACTCCAATATGGTGCAGCATAGGGACCGTCACCACCTAAACAAACGCGCGAAAGTCCGCGACTACGTGTGTCCGGAATGCAACGCGGTCTTCCACTCGCGTGCCAAGTTCTTCTGGCACAAGGAGACTCACGCCGACAAGCCCAAGTCGTGCCAGTACTGCAACAACAAGTTCGTGCACACGGCTTCGCTCACGCGGCACGTGCGCAGGTCGCACAACGCTCTGTACCTCTCGCACCGCACTAAGGGAAACGACAATGTCACCTGTCCGATATGTAAACAGATTTACCTCCGAACGAACCTGCGCGCCCACCTCCAAACGCACAGCGGCAAGCGTCCCTTCTCCTGTGTCATTTGCAACAAATCCTTCACCACCAAATGGAATCTCAAACTGCACCGCTGGACGCACATGAGCCGCTCCACTAAACCCTTCAAGTGCACCCTGTGTAAGGGCGCGTTTATCCGACACACCGAGTACGTGTCGCATATGAACTCTCACAAGTCGGTGCGCCCGTACACTTGCAATTACTGCGGCTGTCAGTTTATAAGGAAATACAACTGTCAGCGGCACGTCAGGGAGCACGAAATGGCTAAGAAGTTCGTCTGCAACGTGCCGGAATGCGGTAAGTCGTTCCACAGGAGCTACTACCTGTCCGAGCACATGAAGGTCCACAGTGGTGTGAGGCCGTTCACGTGTGATATATGCGATAAGACGTCGAGCAATAAGAGCAATCATAACAAGCATATGAAGATACATCACGCTAGGGAAATGGTCGCGTCCGAAGCGTGA
- Protein Sequence
- MDSLVQCPVCTLFLHNGMSLESHLDTHPKDQVIKALCCIAKTSSSCGSSRTATPANSERSYRSRSRTPITEDSGTNSWNPSKDQDRYWARTPSGTSSWTPSGTSSRGGSRTPSRTRTPSRTPSRTPRSQSSANVSRNCTPVMRMVDNLGFETTTASNSTSTSPSRHCSSPIPLVMKQNKPLRKYPPVSVPEFEQQYVDYTDQSEEREVKYSRSAEYDALDLNNVYSYNVPISGNSSKIQPTSSQVSPKKKIELPKVGIPAKSNNLLNLVKNNISANQCLLPYVASRCTPYQMVPNTPTFVQKNIQNSIILGTGLPNTQVQFEPKTVQPVVQNHFNLNPGSFTPGTTVVTQNSQYFYQEMVQNVPTITPVFSSHENITNIAQTSSECTRMYQNVMLVDQFGNTSCMYTPQSVLPKPCAPPLFTENTRSVNTFIQKQGPIKKDPNKTLIIEVGPIVPQRENPRASTSHSVIQSRPYHNVPVIFPPKPEAPSISITEKVEKPDGQGTNRGLKILSNIKVEVPVQHVKSMINTVMDLTGSEDAMYPIRSRSPERILPDLDVNKERVLDNFAQPFTADGESSHSFELKKFAHATSSKDLHSKTSNLDNKIETDFGDSCPVPDLICNEKPSISPCSELSESGDNSVDRAPPSPKPHSSGVIVRKQDVDYKKKSPMKIRLNNIFLKKSKKLHIKNAKTTAHGVEIRPVACSSRSLAPEIFAAAMNASPTRNEISTLKTISIEEIREKDEASFEGMDAVEDVTLPHPPAKSEVAVKEEYTSSNECAFSNEAPGPVRPMGSLDPLRPISVSYGSMSPTDFDDETSNRELLDLEGAKNKQFVSMMNDNYFGDNIYADYFTPDRVEAFDDKGPTVFKENNKEAFSCNIWGEPSTKENEFVLPNFIHESYKIADNGSEYADGAEVREESKADVPPLNICADERMPPRGEISGQESNGETSWHGMYPEAAPAEPYDLMARESWVSDGSELDATEKRDALEAELVQPRSRLFKAHCPPTGSNTTYSRLLTARTIKKEKEEMSAGNILSLDTKGSITSTILEVYDPEGLVESKPALGSLRTLLGKEKRKRRDFVCPTCKVDQITEPAFTAHLKFHPLECPTCGKFFSRRANLQMHIKTHLGIREYKCEVCEKRFMTRQKLGEHHNIHTGRAPYKCTICDETFRRYSNMVQHRDRHHLNKRAKVRDYVCPECNAVFHSRAKFFWHKETHADKPKSCQYCNNKFVHTASLTRHVRRSHNALYLSHRTKGNDNVTCPICKQIYLRTNLRAHLQTHSGKRPFSCVICNKSFTTKWNLKLHRWTHMSRSTKPFKCTLCKGAFIRHTEYVSHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKFVCNVPECGKSFHRSYYLSEHMKVHSGVRPFTCDICDKTSSNKSNHNKHMKIHHAREMVASEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -