Vcam021685.1
Basic Information
- Insect
- Venusia cambrica
- Gene Symbol
- -
- Assembly
- GCA_951394065.1
- Location
- OX596063.1:6709983-6720409[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5 1.4e+04 -2.8 0.0 39 53 114 128 113 146 0.73 2 2 5.2e-14 1.6e-10 41.8 0.1 2 89 223 296 222 296 0.89
Sequence Information
- Coding Sequence
- ATgtctattgttgtgttccagcacgAGGTGCTAGCGATCAACGACAAGGTGGTAATGAAAGCCGAAGACCTGCAGACGTGGACGTGCGACGGGCGCGCGTGGTCGTGCGGCATGCGGGCCGTGTGGCGCGGGGCCTGCGCGCCACCTGCCGACGACCGGGAGACGGAGCCTCTGCACCACACCAAGCTGGACTTCAGCGATGTCGACTCCGAGAAGACTACCATCGTGGTGGACCCAGACGACGCCGGCGTGGTGGTATTCTCGTACCCTCGGTACTGCCGCTACCGCGCCGCGGCCGCCAGGCTTGAGGGTCTGCAGGCGGACTGGCTGAGGGACTCGCTGGTAGCAGCTTTAGGAGGCTACGCTGCTCCTACCAAGAACACCAGGATTATGTACTGCAAGGAAACATTCGAATACCCGGAGCTGGAAGGGCACGAGTTTGTCTGCAACCATCTCGCGCCGAAGCTGAAGGGCAGAGGCCGAGGGAGGCGACGCCGACAGCAGCGGTCGCGGACTCAGTCGCCCGAGTCCAGGTCCAGTGACGACGACAAGGATGGACGGGACTTCACGGCCACTCCCCCGCCCCCCGGGCCCCGGCGCCTGTCGCTCCGCAACGCAGTAGACAAGACATCAGGGTCCGGAGACGAGAAGTACCTTCCACCGGAAGAGAGGCACTTTCTGAGGCGACTCCGACACTTTTACAAGGAAAATGACTCGCTGCCCAAGGCACTCGCACTCAAACACATTTCCCTGAACTCCGTGTACTCGATAGTGACGTCCCGCGGCGGGTACGATGCGGTGTGTCGACAGAAACTGTGGCGCGTGTTGTTCACAGACCAGCCTGTACACACCAGGAGGCATTACGAGAGATATCTGCTAGCATTCGAGCACCACGAGCGTCGCTTCGGCATCAAAGTGAACGGGATGCCCGAGTCGGCAGACACCGGTCACGTGATGCGCTCGCCTCTCAGAGATGACAGGCGATACAAACACCACGTGGACTGCGAAACAGGTGAAATCAAAGAAGTAACGACTAACGCCGACATCAAGCCCGAAGTTATAGAACTACCTCCCTCGCccacggacagacagacgcccGCGATCGTGACGGACCAGGAGATACAGCAGTGGGCAGATCTCAAAGGAGTGGGGTCATTGCCCCCCCTCGCCCCTCTGCCGGCGCCGCACCCCCCCTCCCTCGTCAACGGACACTCCAACACTAACGGAGTACCCTTAGAACAGAAGCCGCACCGTCCGGCGGGGCGCAGCTCGCTCCGCGCCGTGCGCGTGAAGCCGGCGCGCCAACACGCGCAGCCCGCCACCGCCCCCAACACACGTCAGTACCCCCACTAG
- Protein Sequence
- MSIVVFQHEVLAINDKVVMKAEDLQTWTCDGRAWSCGMRAVWRGACAPPADDRETEPLHHTKLDFSDVDSEKTTIVVDPDDAGVVVFSYPRYCRYRAAAARLEGLQADWLRDSLVAALGGYAAPTKNTRIMYCKETFEYPELEGHEFVCNHLAPKLKGRGRGRRRRQQRSRTQSPESRSSDDDKDGRDFTATPPPPGPRRLSLRNAVDKTSGSGDEKYLPPEERHFLRRLRHFYKENDSLPKALALKHISLNSVYSIVTSRGGYDAVCRQKLWRVLFTDQPVHTRRHYERYLLAFEHHERRFGIKVNGMPESADTGHVMRSPLRDDRRYKHHVDCETGEIKEVTTNADIKPEVIELPPSPTDRQTPAIVTDQEIQQWADLKGVGSLPPLAPLPAPHPPSLVNGHSNTNGVPLEQKPHRPAGRSSLRAVRVKPARQHAQPATAPNTRQYPH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -