Vcan003347.1
Basic Information
- Insect
- Venturia canescens
- Gene Symbol
- GATA4
- Assembly
- None
- Location
- scaffold:2102-20008[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.6e-18 1.8e-14 53.3 3.2 1 34 269 301 269 303 0.97 2 3 1.4e-18 3.9e-15 55.4 1.5 1 35 370 403 370 404 0.98 3 3 2.8 7.7e+03 -3.1 0.0 25 32 488 495 487 496 0.84
Sequence Information
- Coding Sequence
- ATGCCACCTTCGAGGGCCACCACCAGCAGGCTGTTCGTCTTGCAACGTTTCGTCAACTCTCCACCACGCGCGATTCGAAGCTTCAGTTCTTGTTCGCCCGCGGTGACAGATACGGAACGTCGAGTAATCCCGACCTTTGTTTTCCTTCGCTTTTCACTCTTCGTCGCTCCCCCTCCGGATTATCGCGATATCAAACCGGAAGAGGCTGAAAGTACAACGGAGACGACGCGAGAAAGAGAGCGGTCCGGAGTCCGTCGCGTTGGAACCGCGCCGATTTCCGGGGAGAATCTCAGCACCGAGATGATGAACTCATCTTTGTACAGATCGATAAGCGGCGTTGGCGGGATGAGCGGAGCTGCTCCGAGTGGACCGTACGGGTTGTCCTACATGACCGGAAGTCCGAACGAGCTGACGACTTCGACTCAACAGCTCTGGACTTCGCAAGGCTTGGGTGGCGCACTTCCGCCCCTCACCGAGGATTACGGCAACACGAAATCACTCCCGAACGTCAGTCAAGCCTTCTCCCAATCTTTTGGCAGGACCACGAGCTTCCGGAACTACAGTCCACCGTACTCGTCTCAACAGTCCGGAGCCGGAGCTCCAGGAAACCCTGGCCCTGATGCCAACTCCTGGTCTTACCCTCCGCAAGCCAGCGAAGCCCTGACCAGCGCCCCTTACACCGTTGTCGTTCCATCCCGCAGACAAAATTCGAATTCGACGTCCCAGCACCAAATTAGCGCTGCGGCTAGTTTGTCAGCTCTGCAGCACAACATCGAGGCCGAGTACTTTACGGAGGGTCGAGAGTGCGTCAATTGTGGCGCAATATCGACACCCCTATGGCGAAGGGACGGGACCGGACATTATCTGTGCAATGCGTGCGGCCTCTACCACAAGATGAACGGAATGAATCGGCCACTGGTGAAGCAACCACGGCGCCTGACTATTATTGTACTTGGAACGAGACCCTTAACGTTTGGCCTCCTGTCTGTTTCAGTGGCGGACCAGGGCGAATTCTACAAAAGCTTCTATGAGTGTAGTAGCGCCCGTCGTGTCCTCGAGGAGAAATCGAGCCGCCGCTTGTCGGCATCGAGGCGCATTGGACAAACTTGCAGCAATTGTCAAACGAGTATAACTTCGTTGTGGCGGCGTAACGTCAGCGGGGAACCGGTATGCAACGCTTGCGGTCTCTATTTCAAATTGCACGGAGTAAACAGACCACCTGGAATGAAGAAAGAAGTCATTCAAACACGCAAACGAAAACCCAAGGGTGGGATGAAACAATCTGATACGCCGCTCTCCAACGTTTCCCAATGTTCAATCAACAACAATAACAACAACAACAATAACAACACTAATAACAACAACTTGAAGCTCGAGCCAGACAATTACACGAATTTGAGAATGGTCGGGCCTCAATCGATGTATTCGAACGCTCTGTATCTCGACAGCCCACCGGCTTCGAGTTGCATAATATCGTACCGGCAAAATCCATCGAACGCTTATTACGACTCGCTGGCAAATCAGCAGCATCAACAGCAGCAGCAGCAGCATCAGCAGCATCAGCAGCATCAACAATTATTGGAGACTCATTCGCCAAAGATAGAGTGTGCCTCGCCGCCGGGTCGCCTCTCACGCTCGCCAGTTCTCGTTTCCGGAAGTCACTCGCCGGATCAACACCATCAGTTGGCATCTCCCCACGTTGCAACACTGAGCAATCTCTCGGTGTCTTCGACCATGAATAAGATTCTTATGGACAATGCTCATCTCGAAAGACCGACCGTCGTCTCGATATCGTCGTAA
- Protein Sequence
- MPPSRATTSRLFVLQRFVNSPPRAIRSFSSCSPAVTDTERRVIPTFVFLRFSLFVAPPPDYRDIKPEEAESTTETTRERERSGVRRVGTAPISGENLSTEMMNSSLYRSISGVGGMSGAAPSGPYGLSYMTGSPNELTTSTQQLWTSQGLGGALPPLTEDYGNTKSLPNVSQAFSQSFGRTTSFRNYSPPYSSQQSGAGAPGNPGPDANSWSYPPQASEALTSAPYTVVVPSRRQNSNSTSQHQISAAASLSALQHNIEAEYFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLTIIVLGTRPLTFGLLSVSVADQGEFYKSFYECSSARRVLEEKSSRRLSASRRIGQTCSNCQTSITSLWRRNVSGEPVCNACGLYFKLHGVNRPPGMKKEVIQTRKRKPKGGMKQSDTPLSNVSQCSINNNNNNNNNNTNNNNLKLEPDNYTNLRMVGPQSMYSNALYLDSPPASSCIISYRQNPSNAYYDSLANQQHQQQQQQHQQHQQHQQLLETHSPKIECASPPGRLSRSPVLVSGSHSPDQHHQLASPHVATLSNLSVSSTMNKILMDNAHLERPTVVSISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -