Vcan001904.1
Basic Information
- Insect
- Venturia canescens
- Gene Symbol
- pnr
- Assembly
- None
- Location
- scaffold:30789-33674[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-18 6e-15 54.8 3.2 1 34 11 43 11 45 0.97 2 2 3.3e-19 9.1e-16 57.4 6.2 1 35 65 98 65 99 0.98
Sequence Information
- Coding Sequence
- ATGGATTTCCAGTTCGCCGAAGGCCGCGAGTGCGTCAACTGCGGAGCAATATCAACCCCTCTGTGGCGACGGGACGGAACTGGACATTATTTGTGCAACGCGTGCGGCCTCTATCACAAAATGAATGGGATGAATCGACCACTCATCAAGCCCTCAAAACGCCTTACAGCTACAAGACGACTGGGGCTGTGCTGTACGAATTGCGGTACCCGAACGACGACCCTTTGGAGGCGTAACAACGAGGGCGAGCCGGTGTGCAACGCTTGCGGTCTTTACTTCAAGCTCCACGGTGTGAATCGACCGTTGGCCATGCGGAAAGATGGCATTCAAACGAGGAAGAGAAAGCCGAAAAAAACGCCGGAGCCAAACGCCAGATCGTCGTCCGGCGATCACGAGACTTCGGCTTCTGCGGCCTCGTCGCCTTCCAATGAGATGAAAAGCAATCAACATCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAACACCATCACATCGAGGGCTCGAAGAGTTCATTATCATCGGTGTCAACGGAGAGACCGGTTTACCTGGGACACACGTCGCTTCTAGCGACCGGAAGCGTCGTGCCTGCGGTGAAAACGGAGCCTCGGAGCTGCGACAGTCACGTGACACAGGCTTACACACCGTACTACCAGCATCCGCATCAGTTAGGAACGACGACGAGCGAGCATCAGCAGCAGAGTTACTACGGGACCCAGGAGGCCCCTTATCACCACCAGCACCACGTGACCACCGCGGCGAAACTCCTCGCCTCGTCATAA
- Protein Sequence
- MDFQFAEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNARSSSGDHETSASAASSPSNEMKSNQHQQQQQQQQQQQHQHHHIEGSKSSLSSVSTERPVYLGHTSLLATGSVVPAVKTEPRSCDSHVTQAYTPYYQHPHQLGTTTSEHQQQSYYGTQEAPYHHQHHVTTAAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00653261; iTF_01497869;
- 90% Identity
- iTF_01497869;
- 80% Identity
- -