Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 1.1e-13 6.1e-10 39.3 2.6 1 22 26 47 26 49 0.95

2 5 0.022 1.2e+02 3.1 0.0 23 29 65 71 59 71 0.89

3 5 7.9e-19 4.3e-15 55.7 7.6 1 29 84 112 84 112 0.98

4 5 0.012 68 3.9 0.2 22 29 129 136 127 136 0.89

5 5 2.3e-18 1.3e-14 54.2 4.9 1 29 169 197 169 197 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	1.1e-13	6.1e-10	39.3	2.6	1	22	26	47	26	49	0.95
2	5	0.022	1.2e+02	3.1	0.0	23	29	65	71	59	71	0.89
3	5	7.9e-19	4.3e-15	55.7	7.6	1	29	84	112	84	112	0.98
4	5	0.012	68	3.9	0.2	22	29	129	136	127	136	0.89
5	5	2.3e-18	1.3e-14	54.2	4.9	1	29	169	197	169	197	0.96

Coding Sequence: ATGAATGTGCTGAGGCAAACGTTGAATTACTCACTCCGGGGATTCCCTCGGGGCCGCGACGGCAAGGAGCTCATTCAGTGTCCCACGTCTTCCTGTGATGGCATGGGTCATGTGTCTGGAAACTACGCTACCCACAGAAGGCAAGGCCGGCAAATATCAAACCGACACTCCACGTTTCCTTTTATACTTCGTCTCTCCGGATGTCCGAGAGCTGATCGTTCACAAATCCAGGCGCATTCCCAAGAGTTGAAATGTCCGACGCCGTCGTGCGACGGCTCGGGACACATTACCGGAAACTACAGCTCTCACAGAAGTCTTTCGGGTTGTCCGAGAGCGGGAAAACCTAAGAGCAAACCTCGAGATGGTCAAGACTCGGAGCCTCTAAGCGCTTCTGGTTGTCCAATAGCGAATCGAAACAAAGCGCGAGTTCTCGAATCTGGTGGAACTGTGGAACAACATAAGGCCGCGGTTGCAGCAGCGACGGCAATGAAATTCGAGGGCGTCAATTGCCCAACCCGTGGCTGCGACGGGATCGGACATGTAAACGGTTCATTCTCGACTCATCGATCGTTATCTGGGTGTCCGAATGCTGGCCATTCGATCAAGAAGCCAAAATTCGAAGACATGAGCCTATACAACAAAGGAATCACCGGTGAGGACAAAAAACTCGAAGAATAA
Protein Sequence: MNVLRQTLNYSLRGFPRGRDGKELIQCPTSSCDGMGHVSGNYATHRRQGRQISNRHSTFPFILRLSGCPRADRSQIQAHSQELKCPTPSCDGSGHITGNYSSHRSLSGCPRAGKPKSKPRDGQDSEPLSASGCPIANRNKARVLESGGTVEQHKAAVAAATAMKFEGVNCPTRGCDGIGHVNGSFSTHRSLSGCPNAGHSIKKPKFEDMSLYNKGITGEDKKLEE

Sequence clustering based on sequence similarity using MMseqs2