Vcan003986.1
Basic Information
- Insect
- Venturia canescens
- Gene Symbol
- -
- Assembly
- None
- Location
- scaffold:97367-108053[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.77 88 4.1 0.3 5 20 908 923 899 925 0.84 2 11 0.026 3 8.8 0.5 1 20 933 952 933 953 0.95 3 11 0.0026 0.3 11.9 1.0 2 23 1021 1042 1020 1042 0.96 4 11 0.0028 0.32 11.8 0.7 3 22 1157 1176 1156 1176 0.97 5 11 0.063 7.3 7.6 0.1 1 23 1192 1214 1192 1214 0.96 6 11 0.00073 0.084 13.6 0.7 1 21 1291 1311 1291 1312 0.94 7 11 0.11 13 6.7 0.4 2 23 1372 1394 1371 1394 0.93 8 11 0.97 1.1e+02 3.8 0.2 1 21 1414 1434 1414 1439 0.91 9 11 0.0039 0.44 11.4 0.2 1 21 1930 1950 1930 1951 0.96 10 11 0.38 44 5.1 0.5 1 23 2311 2335 2311 2335 0.92 11 11 0.019 2.1 9.2 1.7 1 20 2381 2400 2381 2402 0.94
Sequence Information
- Coding Sequence
- ATGTGGAAGACTCGTAAAGAAATTTCCAAACCAGTGATTGGCCAAAATGAGAGACATAAGATTTCAGATAATGGCACTCCAGAAAAAAATTCAACGAGCGATTTATTGAGTATTTGCAGACCATTATCCATCTATTTAACTCGATTACCAGATGCATTGGTAAACAAAAATGTGGAGGTCACAAAAGAGCCACAGGTCAGAAGAAAGAGATACTCGCGTTGGAGATTCGGTACCTATACTAAAAAAAAATCAAAGATCAAGAAGCAAAAAAATGAAGCGGAGAAACACCCACAAGTACTCCAGTCGTCAGAGGTTACCAAAAACGAAAGTAACTCGAGTAGGTTGGTATCGTCCGAAAGATCCTCGACAGGCTTCGATACTACAAAAGTATTAACGGCAGGAGCTATACCATCCGATGTTGAAGGATCAACGGTACAAGAAAACGGAATTGTGGACACCCGAGTGTGTCTTGAGGAAACGGCTGAGTCTTTGACTCATGAAAAAAAATTATCGGAAGCTCAGGATGACTGTACATCAAGCATCGTTGGGTTTAATGTAGCACCTCTAAGCTCTGATACATGTTCAAATTTTGAAGAAAGTACACATGCGTTACAAATCGACGAGCAATGCGCCGACGGAACGGTAATCGTATCACTCGCAACGGAAGATGACAGGACTTGGTTGGCCGATAAAAATTCCACTGAGATTAGTACATCGGACGAGCATAAAAGTCTATCACCTGTGAAACCGGCGAGGAAGAGAAAAAACTCTTCGTTATCCGAGAGCAGCGAACCACCACGAGTTTTACAGCTCCCAAAGAAACCCAGGCCTTTGTCCTTGGCTTCTGAGACTTCTGTATCGTCGTCGGAAGAGCAAAAGGCGACAAGCATAAACGGAATCACCGTTACAAGTCCAGAGCAGCCAGTTTTGCCGACTAATCCGAAAACGCCTGGATCGACTTCACAGGAGCAGCAGCGTCAAGAATCGAAAAAAAATCAGTTAATGAACAAAGTTGTAGTCGTTGTGAACAGACTCGACACTTCTCGTATTCCACTGGCGGAAAAATGGAAGAATCGAGTGGATTTTTCTCGGTTGGATGAAGTGACTTCGAGTTCGAAAGAAAGTCTTTCTGCCTCAACTTTGTCGATAAATCAGTTAAAAAATGAAAATGAAAATGAGCATGAAGCGACGCTAATTGATCACGGATCGAAAGAAATGAAAGAATACTCGCCGGCTCTAATGGACCATCAGTCATTTGGTATTTATGGAAATAATGGCATAGTAATGTGCGACAGTAACGAGGATGACTCTGAAGAAGACGATAACGAGATAATCGAATTTCTCGCGGCACGACGAAGAAGAAGGTCCTCAATCGCAAGTACGCATTCCGCATACACAACTGACGATGAGCCGAATGAAAACCTCGAGTTGTCACGGTCAAGTTCGAAATCACGACATGCGAAGACACCTGATCCTCAGACGTCCGATGCGAAAGGACGAAGAAGAGGACGACTGCGGCATCGAAACAAAAGCTTTGATACAATGTCCGAAACTTCTCGCGATCGCCCAAAATTCAGAAGAATACAATCGGAAAGTCCCGTATTGCGAAAATCGAGAAGAGCTCGTAGATCCCGTTACGCAAATAACAAATCACCGCCGTTAACCCGGAGTAGATCGCGGGCTGCCCTCGATAACGTATATAACGACGACTCGATGAATTCCAGCGACGTGTCCTATCCAAATAGTAAGCGTAAACGATGTCATCGGCTACCCTCCTACTCGAGTGATTATTCGCATGCAGCGCTGGAAGCGGATGAGCTGGTCGATGAAAGCCTCGACGAGAGTCTAGCCGTGGTTGATAACACTGAAAACGTCCACGACGTTGTTGAGAAAGAGTATATTGAGGATAGCAACGAAGCACCCGGGTTGTCGGCTGCTAACGATTCTAATTTCACTTTGGTCGATACCGTGCAATTGGATCAAGATAATGACGTGGAAAATTGTATTGCGCGAAAAAAATTGGCTACCATGAAAAATGCTATGGTGGTATTGACGCGGCTGGAAGATTTGATCAACCAATGTTCCGATGCTGAGACGGAATTCAACCGAGCGCGTAATTATGATTTTTCAAGCAATTTTTCAACGCACGAGAATTACAATGACGAAGCTTATGAGGTTGACGAGACTTCTCGTGGCAGCGTTGATCCTCTTCGAATAGACTCGAATAGTTCGGTCATCGAATCTTCTGTCCGTAAACAGTTTATGGCCAATGAAGTTGCGGAATATGCGCCGGAAAGTGAGGATCCGCGAGAAAACGGGCTCGGTCCTCGCAATCCTGAACAATCCGACCAAACTCAAAGTAGTTTCAGAGTCTCTCCTGAATCATGGGTACGATCGGGACCCAATTCAATCTCGATTGGGAAGAATGGAGTTGTGCGAGATATGTCCGAATCAGACGATGAAAGACGATTAATTGTTGACGAGTCAATATCTAGCGAAAGAACGGATTCAAATGTTGAGTCGATGTTAGCTGTTGATGACGGTGAGAATACGAAAACGGGAACGATACCGATCTCGTCGGAGGGCGTTCCGATCGGTGCGAATGGTAGTAAAAACGATCGGGCGCTGAAGGATTCCACTGAGCCTGGCGAGCTCTGCAACGATAAGGAACATCGGGCCGACAACGCTCACGATAAATGCCAAAACGTTTCACCGAGCCGTAAGTGCAATCGAACCTTGAGAAACTCGGTGCAGTTGGAGCAGCACAAAACGTCAAGCGCATTCTGCAGTTCCGGTTTTCCTTGCAATTTTTGTCAAATCAATTTCAAAACGTTGATCGAATTATCGAAGCACCGAACTGACTGCGCCGAGGAGAACTTCCAGAGACGAAATTCCCACGATACGAAAGCGGACGATGAGACTTCCATCGGACCTAAAACTTCTGCGACTGTTAATAATTCCGAAGCCACGCGTTCCAAAGGAAAAAAACCGAAACAGACGAATCCGAAAAATCCACCGAAGAAAAATCGCAACAGGCCGCGGTGTCGATCGGACAATTTGACTTGCAACGTATGCTCCATGAAATTTGATACCAAAACAGATCTGTCGGAACATTTGTACAAACACAGCCCGGAAGAACTTCAAGAGGCTTTCAGGGCAGCGAAAGCTGAAGCAATGCTGGACAGTCAGGCGGAACAAGCTGCGAAACGAAAAAAGATAATCACAAACAAGAGCAGTGATAATTCTACGGACAATCAAGCGAGTAACATCATTAATAACAACGCTCCGACACAGAATTTTGGTGAAAATGACACGCGACTTATCGTGTCCGGTGTCAGGGTTGGGTCATCGATCGCGTTTAATAAAGATTCATTGACACCGAGACTCGCAACAGTTTGTTTATGTCACAGGGACACAGATCTAACGTCCATGGATATGACCGATCTTCAAATAGAAATGGTTTTACTTTGTAAATATTGTCCTGTTATATTTCGACGACGCGAATGCCTCGAGGTTCATTACCGAACGAGCAACATCTGTTCCGTCAATCGAACGAGAGAAAGGTGCCCGAGTTTTTTCTGTGCCAATTGTCAAATAACTCTCAACAGCTGGGCAGATATGCGTCAACACTTGGAGATACACGCTCACCAAAATTCGGAAAGAACCATTCGATTCGTCTGCAATATTTGTCGAGTTGTATTTGTTGGATTTGGCGTGTTATTCTACAACCATTGGACCAGTCATTCCAAAGATCCAATGTTCGTTGCGGGTCGTTACAATTTTCCCAAATTTTCGGTTCAGGCAACAACTGGAACGGAAAAGTTGCCGATCGGAGCACGATCCGAAGAGAATTATATATTCGTTGCTGAGCATGTATGCGCCACTTGCAAAAGACCATTCTCAACGCGGCGTGATCTCGAAACGCATCAACAGAGCGTGTCCTGTACGAAATCGCCGTCGGTCCTAGCCTCAAAAAATGTCAACACCGCGCGCGCTGAACGTCCCGTTAAAATTAATCGGATCCCCAAACGGAACGAGCGCTCTGTCGTTTCGACTACTTTGACAGTGCCGAGTGCCGACAAGGACAAAAATGAGCTTACGAAAAAGCGTTTGTATTGTGACGTTTGTCGTCTGGAGTTTATCAGTGAACACTGGCTGAACGTTCACAGTAAGAACATTCACAACGATCAGTTCACCTTTGTACCAACGACTGTATACGGTACGCCATTGCCATTGCCGTTCAAATGCAACAAGTGTTCCGCCTTCACGGCTTCGGTCAGCGCAATCAAGAAGCATTGGGAGACCGATGTACTTCATGACCGTAACTCGGCATTGTTGAAAAAGAAAAGACCCTCTACTTCGGCAAAGTCTTCGAAATCTGCACGTGTAACATCGTCTTTGAGAGCGGCTTCGGATTCTCAAAATACTTGCGTTGACGATACGAATAACGCAACGCCGACTGACAAGAGTAAAACATCCAAAGAGCCAGTGATTATTACTATAGATCATACTGATAACGAAAGCACCTCTTGCGCTATCGAACATATTCCGACCCACAATGAGAAATCAGCTCTTTCAGTACCATCTGCCATTACGAACACGGATACTATCCAAGTCTCGAATAGTGATGAATGCCCGGTGGCGGTTGATCCTTTGGTAACCGATCTGCCATCGGCGAGCAATCTAAACGAGATACAGAAAGCAGCTAAAAAACGAGCTTTGGAAGATCCTTGTGTCAACGTTTTGCTCTCTGAAGCGTCTGGTACTAATGTATCTGCATCGTTGATTGTCGGAAATACCATGGAAAAGCCGAAGGAAAACTCGGCCAACGGCGTGACCGAATCGTATCGAATATTGATGTCCGACCAACCATCCCCGGGAAATTTAAAAATGATTTTGACCAGAACGAGTTCGACCGATTCGGCGGGAGGATCTGGACATGCTCGACCAACGGGATTATCCGTTGAAGACGATAATCACTCTGATTCAACGATATCCGCTGACCACTTGGTTCACGGAGAAGAATCTTCGACGGTGTTGTCGGTTCGATCCTCCATCGAAGCGAGAGATGATTCAACGAAAACACCGTCTCCCGAAGACGACGCGGATAAGCAATGTACCTTGGTAGAATTAACACAATCGACCGACGGGGAAGGAAACGATCCAACGGGGGGAACTCTCACTCGAATCTCCGATTCAACGGCACGCGTCAACTCTAACGAAAAACCTACGCCGTTAATTTTGACACGATCAATCGTCGCAGAAGCTAATAATAGAACGGAAAATAATGGAAATCGTCCTGGAAGCGCAACGAATATCTGCATCGTACCGGAAGTAATTGATATACTCGATGACGGGGAAGATTGTGGAAACGGGCAGGAGCCACCGAGTCAAAACTCTGTCGTGATTCTCACGCCCCCGAGTCACGCCGAGTCGTTAATTAATAAGAATAAAATTTTGCACAGTTTACTGGAAAGTGAAACATCTAATACGGATCTAATACGGGCCAAGGATCCTACAGCGATAATGATCGACTTTCCAGAATTTCGTTTCGTTGAAGACACACAGAAAACAATCGGGGGGAATTCTTCAAGCTCGGGCAATAGCTCGAATTCAATGGTCAGTAAATCCGGTTCGCCTGGTCGATCGAAATTTAATAAAGGAGCTTTGAAGCTGTGCGGCATGTCGTTTGAAGAAGCTAGATGGAATTATTTACAATCGACGGTACAAAAAAAACAAGGCTTTCTGCGAGTCAAAGATTTGTCAGAGTTGCAGGCTGTAAAAAATTATACGTGCGGTATTTGCAACAGCTCTTTCGAATCGGAAAAATCGCTGGAAGAGCATCGTCGATTGCCATCGACGTGCGGTAATTTCATTCAGGCCAGGAACGTTCATCAATACTCTCGTGGCATTTCGGCAGCTCTTGTACTGCCGGATCCTTCGGAACGGCCGAAAACTCCCGAAACTAATGTTGCCGCCGCATCACCGCTGGACCCAATGCACAACAATACGATATCATCGGTGAGACGCGCTTCTGCACCGCAACCACCTGTCTATCCTCTGCAAGAAATTTCCGCTCTAGTTCCTGCTCAAAGGATTCAAGTAATCAGCCAGCTGCCAACTATAGCCCTGCATGATAAGTCCCTGGGTTCTTGGACATCGATCGTTGATACTACACCCGTGTTAAGTACCAATTTCAATCCAGTGAATGAAAATCAACCGCTGCTTCAGCAGCAGCCACAGCAGCAACAACAGCAACAACAACAACAACAGCAGCAGCAGCAGCCACAGCAGCAACAACAACAACAGTTGAATATGATGTCCGGTGGTACGATCATTGTGAAGGATTCTAATCAGGGGCTTCCTGAAAATCGTAACTCGTCATTGGGCTATCATGCTCTACCTCGAATTATTAGTTTACCGACAGCTCCAAAAAGCAATCATCAACTCGCGACTGCTCCGCAGCTCGTCCCTTCCAGTAATTCTCTTCCAAAGTTCACAGGGAGAAATGCTCCCATAGTGATCCATCAGCCGAACAAACGAAACAAATATCTTTGTAGCATATGCCATACTTTCGAATGCACGAGTTTGGAGGCTATTAAGGAACATCTGAATGGGCACTATAATGACTGGACTAATTCGACAACGGCTCAAGACTCGACGCAGCCGGCAGCATCGGTTGCCAGACTTTCCGGCGGTGCATCATCCGACACCGTTCCATTATCTTGTACGGATATGAGAGAACGGAACCAACCGATTCTCCCGAAACCCTTAACTTCGAGCAATTGGACCGCTAATAATACACCACAAGGATCTGTCTTCGTCGCTCCGATTTCGAACGCATCGAATAACAGTCGATCGTTTGTTCGTCAGACTCCTTTCGACACGAATAATCTCGCCTCGAACCCTCCCTACAGCGCTCAACTCGTTTTTCGCTGTAGAATATGCAAATCCGCGGTGTACAAAAGTTATTCATCGTTGCGAAATCATGCGTTACTCGTACACGCCATTACAGATTTTAATTCGCTCGTTCAAGAAAAAATCTCACAAAATAGTTATCTTTGTACTCAGTGTCCGTACTCCAGGGCACTCTTCGATACCTCGGAAGAATTTCGCGAGCACGTTGACACTATCCATACTCACTCTTGTCCATCCTGTCAACGTGTTTTTTCAAACTTTCTCACCCTCAGACATCATCTGGAACAATGTCGAGTTTCCACATCCAGCAACCGTAATGCTTATGGCAACAATTGTTGA
- Protein Sequence
- MWKTRKEISKPVIGQNERHKISDNGTPEKNSTSDLLSICRPLSIYLTRLPDALVNKNVEVTKEPQVRRKRYSRWRFGTYTKKKSKIKKQKNEAEKHPQVLQSSEVTKNESNSSRLVSSERSSTGFDTTKVLTAGAIPSDVEGSTVQENGIVDTRVCLEETAESLTHEKKLSEAQDDCTSSIVGFNVAPLSSDTCSNFEESTHALQIDEQCADGTVIVSLATEDDRTWLADKNSTEISTSDEHKSLSPVKPARKRKNSSLSESSEPPRVLQLPKKPRPLSLASETSVSSSEEQKATSINGITVTSPEQPVLPTNPKTPGSTSQEQQRQESKKNQLMNKVVVVVNRLDTSRIPLAEKWKNRVDFSRLDEVTSSSKESLSASTLSINQLKNENENEHEATLIDHGSKEMKEYSPALMDHQSFGIYGNNGIVMCDSNEDDSEEDDNEIIEFLAARRRRRSSIASTHSAYTTDDEPNENLELSRSSSKSRHAKTPDPQTSDAKGRRRGRLRHRNKSFDTMSETSRDRPKFRRIQSESPVLRKSRRARRSRYANNKSPPLTRSRSRAALDNVYNDDSMNSSDVSYPNSKRKRCHRLPSYSSDYSHAALEADELVDESLDESLAVVDNTENVHDVVEKEYIEDSNEAPGLSAANDSNFTLVDTVQLDQDNDVENCIARKKLATMKNAMVVLTRLEDLINQCSDAETEFNRARNYDFSSNFSTHENYNDEAYEVDETSRGSVDPLRIDSNSSVIESSVRKQFMANEVAEYAPESEDPRENGLGPRNPEQSDQTQSSFRVSPESWVRSGPNSISIGKNGVVRDMSESDDERRLIVDESISSERTDSNVESMLAVDDGENTKTGTIPISSEGVPIGANGSKNDRALKDSTEPGELCNDKEHRADNAHDKCQNVSPSRKCNRTLRNSVQLEQHKTSSAFCSSGFPCNFCQINFKTLIELSKHRTDCAEENFQRRNSHDTKADDETSIGPKTSATVNNSEATRSKGKKPKQTNPKNPPKKNRNRPRCRSDNLTCNVCSMKFDTKTDLSEHLYKHSPEELQEAFRAAKAEAMLDSQAEQAAKRKKIITNKSSDNSTDNQASNIINNNAPTQNFGENDTRLIVSGVRVGSSIAFNKDSLTPRLATVCLCHRDTDLTSMDMTDLQIEMVLLCKYCPVIFRRRECLEVHYRTSNICSVNRTRERCPSFFCANCQITLNSWADMRQHLEIHAHQNSERTIRFVCNICRVVFVGFGVLFYNHWTSHSKDPMFVAGRYNFPKFSVQATTGTEKLPIGARSEENYIFVAEHVCATCKRPFSTRRDLETHQQSVSCTKSPSVLASKNVNTARAERPVKINRIPKRNERSVVSTTLTVPSADKDKNELTKKRLYCDVCRLEFISEHWLNVHSKNIHNDQFTFVPTTVYGTPLPLPFKCNKCSAFTASVSAIKKHWETDVLHDRNSALLKKKRPSTSAKSSKSARVTSSLRAASDSQNTCVDDTNNATPTDKSKTSKEPVIITIDHTDNESTSCAIEHIPTHNEKSALSVPSAITNTDTIQVSNSDECPVAVDPLVTDLPSASNLNEIQKAAKKRALEDPCVNVLLSEASGTNVSASLIVGNTMEKPKENSANGVTESYRILMSDQPSPGNLKMILTRTSSTDSAGGSGHARPTGLSVEDDNHSDSTISADHLVHGEESSTVLSVRSSIEARDDSTKTPSPEDDADKQCTLVELTQSTDGEGNDPTGGTLTRISDSTARVNSNEKPTPLILTRSIVAEANNRTENNGNRPGSATNICIVPEVIDILDDGEDCGNGQEPPSQNSVVILTPPSHAESLINKNKILHSLLESETSNTDLIRAKDPTAIMIDFPEFRFVEDTQKTIGGNSSSSGNSSNSMVSKSGSPGRSKFNKGALKLCGMSFEEARWNYLQSTVQKKQGFLRVKDLSELQAVKNYTCGICNSSFESEKSLEEHRRLPSTCGNFIQARNVHQYSRGISAALVLPDPSERPKTPETNVAAASPLDPMHNNTISSVRRASAPQPPVYPLQEISALVPAQRIQVISQLPTIALHDKSLGSWTSIVDTTPVLSTNFNPVNENQPLLQQQPQQQQQQQQQQQQQQQPQQQQQQQLNMMSGGTIIVKDSNQGLPENRNSSLGYHALPRIISLPTAPKSNHQLATAPQLVPSSNSLPKFTGRNAPIVIHQPNKRNKYLCSICHTFECTSLEAIKEHLNGHYNDWTNSTTAQDSTQPAASVARLSGGASSDTVPLSCTDMRERNQPILPKPLTSSNWTANNTPQGSVFVAPISNASNNSRSFVRQTPFDTNNLASNPPYSAQLVFRCRICKSAVYKSYSSLRNHALLVHAITDFNSLVQEKISQNSYLCTQCPYSRALFDTSEEFREHVDTIHTHSCPSCQRVFSNFLTLRHHLEQCRVSTSSNRNAYGNNC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -