Basic Information

Insect: Venturia canescens
Gene Symbol: RREB1
Assembly: None
Location: scaffold:1430-19722[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0025 0.29 12.0 0.0 1 23 198 220 198 220 0.97

2 16 0.00016 0.019 15.7 0.3 1 23 234 256 234 256 0.98

3 16 2.2e-07 2.5e-05 24.7 1.3 1 23 262 285 262 285 0.98

4 16 0.043 4.9 8.1 0.7 1 23 390 413 390 414 0.93

5 16 3.5 4e+02 2.1 2.8 2 23 420 442 420 442 0.91

6 16 1.2 1.4e+02 3.5 0.3 1 19 500 518 500 520 0.89

7 16 0.0063 0.72 10.7 0.1 1 23 640 662 640 662 0.97

8 16 5.5e-05 0.0063 17.2 0.3 1 23 671 693 671 693 0.98

9 16 0.0048 0.55 11.1 3.1 1 23 699 722 699 722 0.97

10 16 0.00043 0.05 14.4 3.0 1 23 1170 1193 1170 1193 0.97

11 16 0.00062 0.071 13.9 0.1 3 23 1453 1473 1451 1473 0.97

12 16 0.86 99 4.0 6.5 1 23 1479 1502 1479 1502 0.97

13 16 0.017 2 9.3 1.8 1 23 1568 1592 1568 1592 0.95

14 16 0.089 10 7.1 3.1 1 23 1739 1762 1739 1762 0.97

15 16 0.011 1.2 10.0 0.4 2 23 1819 1840 1818 1840 0.94

16 16 1.2 1.4e+02 3.5 8.2 1 23 1846 1868 1846 1868 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0025	0.29	12.0	0.0	1	23	198	220	198	220	0.97
2	16	0.00016	0.019	15.7	0.3	1	23	234	256	234	256	0.98
3	16	2.2e-07	2.5e-05	24.7	1.3	1	23	262	285	262	285	0.98
4	16	0.043	4.9	8.1	0.7	1	23	390	413	390	414	0.93
5	16	3.5	4e+02	2.1	2.8	2	23	420	442	420	442	0.91
6	16	1.2	1.4e+02	3.5	0.3	1	19	500	518	500	520	0.89
7	16	0.0063	0.72	10.7	0.1	1	23	640	662	640	662	0.97
8	16	5.5e-05	0.0063	17.2	0.3	1	23	671	693	671	693	0.98
9	16	0.0048	0.55	11.1	3.1	1	23	699	722	699	722	0.97
10	16	0.00043	0.05	14.4	3.0	1	23	1170	1193	1170	1193	0.97
11	16	0.00062	0.071	13.9	0.1	3	23	1453	1473	1451	1473	0.97
12	16	0.86	99	4.0	6.5	1	23	1479	1502	1479	1502	0.97
13	16	0.017	2	9.3	1.8	1	23	1568	1592	1568	1592	0.95
14	16	0.089	10	7.1	3.1	1	23	1739	1762	1739	1762	0.97
15	16	0.011	1.2	10.0	0.4	2	23	1819	1840	1818	1840	0.94
16	16	1.2	1.4e+02	3.5	8.2	1	23	1846	1868	1846	1868	0.98

Sequence Information

Coding Sequence: ATGAGGAGCCGGGACGGGGTGCGAGCAGGGCGGGGGTCCGGAGGGGGATGCCAAGGGAGTCGGCGTACTGGTGAAATCCTCGCTGGTCTTGCTCGAGCGTCGCGTACAGCGGCGCGAGGGAGAGATCGGCGGAGAGGAAGAATAGTGGGAGTGAGGAGTGTTGTTGGCCGGCAATGCGGCGCTGTAGCCAGCAGCAGCATCGTCCAAAAGAAAGAGGCGAAGAAAATAGAGGAGGTAATAAAAAGGGGGAGAGAAATGGTGCGGAGAAGAGCAGGGACGAAAGGAAAGGGAGCGAGAGATATAAAAGGGACGGGAGAGAGAGAAAATAAAATAAAAATAAGGCAGAGAGCAGACGAGACAGCAGCACGTGAAGCATTACGAATCGAGGCAGCGGTGGGGATAAGCTTCGCTGTGGAGAAGAGCGACGGAGTGAAGACCACAACGACAGCAGCAACAGCAGCAGCAGCAGCAGCAGGGGCGACGGAATCCGAACAATCTGACAACAAAATTGACCATCGTTACGGCAGCGACACGCATACGGATGCAGCTTCATCGCCATTGACGTCGGAGCAACAGGAGGGAGGAACAACGTACGCTTGCCCGGCGTGCCCGGCAGTGCTGACAACGTCGCGAGACTTGACGAACCATTTGCGAGGGCACAATTCACCGCGGAGCACAGATTACAGTGGCGAGGAGGATTATTCGTGCGGGGTTTGTCACAAGGTGCTGAGCTCGGCGAGCTCGTTGGACCGGCACGTGCTGGTGCATTCGGGAGAGCGTCCGTTCAAGTGCAAATATTGCGACATGGCGTTCACGACGAACGGTAACATGAACAGGCACTTGAGAACGGCGCACGGTTCGTCACCGAGAGAGACGACGAACGGATACACGGACTCGGAGGGGAGCAGCGACTCGGAAAAGTCGGGAGTAAAGCGCCGACGACGCCACGTCGTCGAGCAGGAATACAACAACAACGAAATCGGTAAGAGAAGCTCCCCTAATTTGTTGAATCAGTTGGAATCCCCGACGCGATTCACGGCCAAGAGAAAGCGCTCGGAGATGATCGAGGAGGCTGAAAATCCTTCGAGAAAGCATAAAATAATGTTGGGCAATTGCCGAAGCGAGATACAAAACGGGGAGAGCAAGAGCGAGTCCCGGGCGGTGATGCACAACTGTCCGGTCTGCGGGAGACTCGATTTCCCGACGAGCGCCCTCTTGGAATCGCATTTGGAACGTCACCATCCGGACTTCCCGGCGAAATGCGATCCCTGCAATCTCTCGTTCAAAAATCACCGAGTTCTCAACCTCCACAAGTACATGAAACACATAGAGAACGAGAACTCGTCGGCGGGTAACAACGGCAGAAATTTGAGAAACTCGGTCGTCGGTTTCCACGATTTGACTTTCGTGGACTTTTCGTCAGATAAATTTCCGGCGATTGCGCGAGCCGTCTGCGAGCAATCGTTGCACCGACCAGCCTCCGGCGAGATTGCGAGATTTCAGTGCGACAAATGCCTCAGAGCGTTTCCCTGTCGCTCGGCACTGGACGCCCACGAAATGGACTGCGGCACGGCGGTCCAAGCGCCGATTTGCTGTTTGGAGGATCGCTCATCGAGGAGGGACGACTTCTTCGCTGGTTTGGACCTCCAGAACAGAGCTGCCCTCAACGAGGCGAAGGAGGGTAAAGATTTGGCTGATATTCAAAGTATTATTTCGATCACTTGCGGTCCAATATTACGAAGCTTTCCTCGTTCAGATACGAGCACTCCGGAACACCATCACCAGGCAAAACCGAACCCGAGCATCGCCGGCTCCTCCGGATCTTCCGGGACACCGTCTTCCTCGGATTACCATCAAGAAGAGGAGGCCCAGGACGCCTTCGCCGCGGAGTTTCGCCGTATGAAGCTCAAAGGAGAATTTCCTTGTCGCTTGTGCGACGCGGTATTTCCAAACTTGCGGGCGCTCAAAGGGCACAACCGTTCTCACATGGGAGTCGGACCAGGAATGCCCTATCCCTGCAACATGTGTCCTTACACGAGCAACGACAAGGGCACTCTTGTGCGCCACCTCAGATCCCACAACGGCGATCGCCCCTTCGAATGTTCCCTGTGCAACTTCGCTTTCACTACGAAAGCGAATTGCGAGAGGCACGTGAGAAATCGCCACGGTAAGGTTTCCCGAGAAGAGATTAAAAGCGTTATTATTTATCATCCGAGCGAGGACAGCACCAACGATTCTGGATCGCTCGACCGATCGGAATCCCGTCGCGAAGACGCTCGCAAGTCCCTCGTATATCCGCCTTCCGTGACCGATCTCAAAGACGAGACCAGCCAGCGTCGCAAGGACTTTTATCTCGGCCTCCAGTTTGGAAACAAACAAAACAGCTCTTTCATCTCCGAGAACGCGAGCCAGATTTCCATCGTGCAGTCTCTCCACTACGACAACAGTGAAATGTTCGCCAGAGCTCGAGGCTTCTCCCAGGATAACAACCCCAGAAATATCGACGAGGATCCCGACGAGGACGATTACGACGAGTACGATTACGAGGAAAACGAGAATGACTCGGCCGCCAAATCGGAGAACAGCGTTAAACTCGATTCCAACGTTAATTCGGGATCTTCGGAGGACGACGGAACGGTTTCTCTAGTCAACGATACCAAAACTGCAGCCGCGGCAGCGGCAGCAGCAGCAACAGCAGCAGCAGCAGCGCACCAAAGAGTACTTCAAACTAGTCCGATCGACTTGAAAAAGAGCAGCAGCGCGAGGTCCTCCAACGCCGCGGTGGCCGGGGACGGCGAGCAGGTCAGAGAGAGTTCAAGCTTTGCAACCGGCGAAGACGCGCCTCTCGATCTTTCCATGGATGTTCTCGATTTGAGTAAAAAATCAAACGGCAATCGAGCCTTTTCGCCGTCTTCGCCGAGCACGGCGACAACGATGCCGAAAAACGAGGCCGAGTTTGGCCGGAATCAGAAAGAATTTTATGACGCGACGAATCAATTCTTGCTGACCCAAGCTTTGCTCAAAGCTGGACAAGCCGGAAACCCGGCAACGTCCCTCGAAGCTCTCTACGCCAACGCTCACATGATTTATCGTAATTTCGGTGGTTTTACAGCGGCCGGAGTCGGCGCTGGTATTTTACCCCCTTATCTCTTCAATCCGCACATGTTCGGTCAAGATTTCGCGATCAAAGATCGTCTGCAGAAGGAATTGGTGCGGGGATTGCAGCTGACCAGCGGCGGCAATCTGGTCGAGCCACCGATCGGAAATACCGCGTTCGCCGGCGCTTATCCTCCGGGACGAGACGGCACGACCTCACGCCCCGAGCTACCAAACGATTACGGAAAAATGAGCGCGTCCAAATTGTCACCGAAAGTGGCAACGAGCGCGCCGGTGAGAGAAGCCAAAATTGAGAGCCATCCTCAGTCATCGAATTCCGTTAAAATGGTCATAAAAAACGGAGTCCTTATGCCAAAGCAAAAGCAGCGAAGATACCGGACCGAACGACCTTTCACCTGCGAACACTGCTCCGCGAGATTCACACTCCGGAGCAACATGGAAAGACACATAAAGCAACAGCATCCTCAGCACTGGAGCCAAAGACCACGAGGCGGACATTCCACGAGGGGAAGACCGCCCGCGAATCCTCCGAGCCTCTTGTCGAGCTCCAGCAATCATTCGATCAATAATTCCCTGTCTCAGCAGGGCTGCAATATTCTGCCGAAAATCGGAGCTTCCGGAGGACTGAATTACGAAAAACATTCCATTTCGGATCAGGTCAAATACGCGATTCTTGCTCAGCAGCTCAAAGGCAGCAGCAAAACGGAGGAGAACGACACCGAGGAAGAGTTGGAGGAGGAGGAGGAGGAGGCGGAGGAGGAGGAGGAGGAGGAGCAGCAGCAGCAGCAGCAGCATCCGGAGCCGATGGAATTAGAGGACTGTTGCAGGATGGAGATTAAAACGGAGCCGAAGGACGGGGAGGAGCGGGGGGAGACCGAACGGAAGGAGGAAACTCGGGCACCCAATCAGTGCGATGCCTCGGAATCGGCTGTGAAAGTGGAGCAGCAATCGAGCTCGCGCGATTCTCTAAAGAACGAGAGAAACGAGGATCTCGCGAGCGTTTCCGAATTACTGGACAACGCTTCCCAGCAGTATCAACAATTTCAGCCTCAGTACATGAGCGACGAAGAAGGCCTCGTCGCTTCGACCAGCGACTGCAACAATTCCGGCAGCGACGAAAAATCCGATTCCGTTAATTCCGCAAACTCTAACAATTCGCAATCATCGAAACGCAAAAAGAAGAAAAAGAAGAAGATGAAGAAGAAATCTGCCTATTCCATGGCACCTAACAGAGTCATTTGCCCGTACTGCGAGAGACCCTTCCCCTGGACTTCCTCTTTAAGGAGACACATTCTCACTCACACCGGACAAAAACCTTATCAATGTATGCACTGCTCCCTCCTCTTCACCACCAAGTCAAACTGCGATCGCCACTTGTTGCGAAAACACAAAAACACCGCCAACAAAATTCGTCGGATGAGGAATTCCTCGTCCCCCGAAACCCTCGAACAACCCTCCAACAACAATACGACCAACAGCAACAACAACAACATCACCAACACCATCAACAACAACAATAACAACAACAACAACAACAACAGCTCCAGCAGCGCCTTCGCCATGAGAAACGTTCCGGAGAGGCCCTACAAATGCAATCTTTGCCCGAGTTCCACCTTCTCCACTCTCGGCAATCTAAAGAAGCACAAATCCTCGAAACACTCGAGAAACACGGAGCCCAAGTCCCGGGCCGAGTCCCCCGTTACCAGCGAGCCCCGTCACAGCCCGATCACAGCGTCGTGCATCAAACAGAACGACAACAGCGGCTACGAGAGCCAATCCTCGACCAACTCCGAGAACACGGACCGCATCGAAGGGATGGAAAGTTTGGAAAACCCTCGCTCAACCGGGCCTGCCAATCCCGAGGAACCGGAGGCACCGGAAACCCAATTAGCAACGCCGGAAACTACAAACGAGTCGCCCGAAATCCCCAACGAAGACAATCTTGAAAGCAACAATGGCCAGGAGGCTCCCGAGCAACTTTCCAACCCCTCGGAAAATCAGATCGCAAAAAATTCTGAAAACAATTTGGCAGCGAACGAAACCGCTAAATCTCGAAGATTGTCCCCGAGGTCCTCGCCCGGACCTACCGACGCTCCATTCAAGTGTCACCTCTGCGACAGCGGCTTCTCCGACCGTCAGGACTGCCTCGAACACATCAGAATCAATCACACACGATCCTACGAAGTTCTCGTCGCCAAAGGCGCACTCGATATGGACATCGAAACTCCTGAGGAACAGCAACAAATGCCACAACCTCCACCAAACTCAACGACTCAACACACCAGCGATGGGGAAGAAAAACGAGGCAGGTTCCCCGACTACAGCAATAGAAAGGTCGTCTGCGCCTTCTGCATGCGTCGTTTTTGGTCAGCGGAGGATTTGCGTCGTCACATGAGAACGCACACAGGTGAGCGGCCATTTTCGTGCGACATATGTTGTCGCCGTTTTACTCTGAAGCATAGTATGTTGCGACATCGTAAAAAGCACGAATCGGTTGATTCGATGATGTACGTGGGTACGAGCGGGGACGAGGAATCGGCTCCGTCGCAGCCCCCGACGATAACGCCTCGTACTCAGCAGCAACAACAGCAACAGAGCATGAACACAACGGTGTGTGACTCGAGGATCCAGGAAAGAATGTCTTTGCCAACGGTGGCAACGGTCGCGACCGGGGACGCCGCACCGAGCGGTTTGATGAGGTTCAATCCTTACGAAAAACTTACGACTCTCACTGGCAAAATGGCCAACGCTCAACAAGCCTTCAGCGAATGTCCTACCGACACGGAAAACGATCTCATTTCCAATCTTCTTGGTATTCGCGATAAGAGCATCATTGACAAAGTTTTGCAAGCATCGGCCGACGACGCCGCCAAATTACTCGGTGTCAACAGACATCACGATTGA
Protein Sequence: MRSRDGVRAGRGSGGGCQGSRRTGEILAGLARASRTAARGRDRRRGRIVGVRSVVGRQCGAVASSSIVQKKEAKKIEEVIKRGREMVRRRAGTKGKGARDIKGTGERENKIKIRQRADETAAREALRIEAAVGISFAVEKSDGVKTTTTAATAAAAAAGATESEQSDNKIDHRYGSDTHTDAASSPLTSEQQEGGTTYACPACPAVLTTSRDLTNHLRGHNSPRSTDYSGEEDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHGSSPRETTNGYTDSEGSSDSEKSGVKRRRRHVVEQEYNNNEIGKRSSPNLLNQLESPTRFTAKRKRSEMIEEAENPSRKHKIMLGNCRSEIQNGESKSESRAVMHNCPVCGRLDFPTSALLESHLERHHPDFPAKCDPCNLSFKNHRVLNLHKYMKHIENENSSAGNNGRNLRNSVVGFHDLTFVDFSSDKFPAIARAVCEQSLHRPASGEIARFQCDKCLRAFPCRSALDAHEMDCGTAVQAPICCLEDRSSRRDDFFAGLDLQNRAALNEAKEGKDLADIQSIISITCGPILRSFPRSDTSTPEHHHQAKPNPSIAGSSGSSGTPSSSDYHQEEEAQDAFAAEFRRMKLKGEFPCRLCDAVFPNLRALKGHNRSHMGVGPGMPYPCNMCPYTSNDKGTLVRHLRSHNGDRPFECSLCNFAFTTKANCERHVRNRHGKVSREEIKSVIIYHPSEDSTNDSGSLDRSESRREDARKSLVYPPSVTDLKDETSQRRKDFYLGLQFGNKQNSSFISENASQISIVQSLHYDNSEMFARARGFSQDNNPRNIDEDPDEDDYDEYDYEENENDSAAKSENSVKLDSNVNSGSSEDDGTVSLVNDTKTAAAAAAAAATAAAAAHQRVLQTSPIDLKKSSSARSSNAAVAGDGEQVRESSSFATGEDAPLDLSMDVLDLSKKSNGNRAFSPSSPSTATTMPKNEAEFGRNQKEFYDATNQFLLTQALLKAGQAGNPATSLEALYANAHMIYRNFGGFTAAGVGAGILPPYLFNPHMFGQDFAIKDRLQKELVRGLQLTSGGNLVEPPIGNTAFAGAYPPGRDGTTSRPELPNDYGKMSASKLSPKVATSAPVREAKIESHPQSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPSLLSSSSNHSINNSLSQQGCNILPKIGASGGLNYEKHSISDQVKYAILAQQLKGSSKTEENDTEEELEEEEEEAEEEEEEEQQQQQQHPEPMELEDCCRMEIKTEPKDGEERGETERKEETRAPNQCDASESAVKVEQQSSSRDSLKNERNEDLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSANSNNSQSSKRKKKKKKKMKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNTANKIRRMRNSSSPETLEQPSNNNTTNSNNNNITNTINNNNNNNNNNNSSSSAFAMRNVPERPYKCNLCPSSTFSTLGNLKKHKSSKHSRNTEPKSRAESPVTSEPRHSPITASCIKQNDNSGYESQSSTNSENTDRIEGMESLENPRSTGPANPEEPEAPETQLATPETTNESPEIPNEDNLESNNGQEAPEQLSNPSENQIAKNSENNLAANETAKSRRLSPRSSPGPTDAPFKCHLCDSGFSDRQDCLEHIRINHTRSYEVLVAKGALDMDIETPEEQQQMPQPPPNSTTQHTSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSMMYVGTSGDEESAPSQPPTITPRTQQQQQQQSMNTTVCDSRIQERMSLPTVATVATGDAAPSGLMRFNPYEKLTTLTGKMANAQQAFSECPTDTENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRHHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -