Basic Information

Insect: Venturia canescens
Gene Symbol: -
Assembly: None
Location: scaffold:52103-57073[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00054 0.062 14.1 0.1 2 23 870 891 869 891 0.97

2 17 4.2 4.8e+02 1.8 0.2 3 19 899 915 897 917 0.88

3 17 1.4 1.6e+02 3.3 1.2 2 23 924 945 923 945 0.96

4 17 0.00053 0.061 14.1 1.9 2 23 953 975 952 975 0.96

5 17 0.0012 0.14 13.0 3.2 1 23 982 1005 982 1005 0.98

6 17 0.00052 0.06 14.1 2.1 3 23 1013 1034 1012 1035 0.96

7 17 2.6 3e+02 2.5 1.6 2 23 1042 1062 1042 1062 0.91

8 17 1.2e-07 1.4e-05 25.5 2.1 2 23 1068 1089 1067 1089 0.97

9 17 2e-06 0.00023 21.7 0.2 1 23 1095 1117 1095 1117 0.99

10 17 0.0039 0.44 11.4 2.8 2 23 1129 1151 1128 1151 0.95

11 17 0.41 47 5.0 2.6 1 23 1157 1180 1157 1180 0.92

12 17 0.0051 0.58 11.0 2.0 2 23 1202 1224 1201 1224 0.95

13 17 0.00075 0.086 13.6 0.8 2 23 1231 1253 1230 1253 0.96

14 17 3.6e-05 0.0042 17.8 1.7 2 23 1261 1282 1260 1282 0.97

15 17 0.0011 0.12 13.1 2.3 1 23 1288 1311 1288 1311 0.96

16 17 0.29 33 5.5 3.2 2 23 1318 1339 1317 1339 0.96

17 17 0.45 52 4.9 1.9 1 23 1345 1367 1345 1367 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00054	0.062	14.1	0.1	2	23	870	891	869	891	0.97
2	17	4.2	4.8e+02	1.8	0.2	3	19	899	915	897	917	0.88
3	17	1.4	1.6e+02	3.3	1.2	2	23	924	945	923	945	0.96
4	17	0.00053	0.061	14.1	1.9	2	23	953	975	952	975	0.96
5	17	0.0012	0.14	13.0	3.2	1	23	982	1005	982	1005	0.98
6	17	0.00052	0.06	14.1	2.1	3	23	1013	1034	1012	1035	0.96
7	17	2.6	3e+02	2.5	1.6	2	23	1042	1062	1042	1062	0.91
8	17	1.2e-07	1.4e-05	25.5	2.1	2	23	1068	1089	1067	1089	0.97
9	17	2e-06	0.00023	21.7	0.2	1	23	1095	1117	1095	1117	0.99
10	17	0.0039	0.44	11.4	2.8	2	23	1129	1151	1128	1151	0.95
11	17	0.41	47	5.0	2.6	1	23	1157	1180	1157	1180	0.92
12	17	0.0051	0.58	11.0	2.0	2	23	1202	1224	1201	1224	0.95
13	17	0.00075	0.086	13.6	0.8	2	23	1231	1253	1230	1253	0.96
14	17	3.6e-05	0.0042	17.8	1.7	2	23	1261	1282	1260	1282	0.97
15	17	0.0011	0.12	13.1	2.3	1	23	1288	1311	1288	1311	0.96
16	17	0.29	33	5.5	3.2	2	23	1318	1339	1317	1339	0.96
17	17	0.45	52	4.9	1.9	1	23	1345	1367	1345	1367	0.95

Sequence Information

Coding Sequence: ATGAGTGAATCTATTAAAAACGCGTCGAATCTTAGCGTTAGTGAAAATAACGATTCAAAACATTTTCGTGAGAATGTGAAAGATGACGAATCCAACAATGATGATCTCATACGAGATCTCACTTCTGAAAGTATCGTAACCCTTGATGCTGTTGTTTCTGGCAATGGAAACGTTCAAAATACTGCTCTATCAGAGGTTCCAGCCGCTGGAAATGTTGTCAGCGGTGGTGGGATGTTCATTCGGAACAGTGGCAGCATCAAAATCATTCAAGATGCTGTTCCTGGGCAAATCAAAACATGTCCCAGTCCAGCATCAAAGTCTGACAGGGAACACGATTACAGCGAAGTCCGGCGGATAATAACGCCTGAAAAATCACTCAAAATCTTTGATAAAAAGGCTTGTACAATAGTGAAAAGCAACAGTGCTTCACCTCTGAGAGCACCACAGCGTAGAATACAAACTCCGATACAAGAAAGGATGGTATCGCAAGTGAAAAATATCAACGATTTAAAAAAAGTTACGCCACGCGTGAAGCTCATATCGTCAGAGCCCACAACTCTGGCACAATTGACAAATCCGTTGAGCACCAGTGTTTTGGAAATGAAGGCTGTGGTTACCCAAGAAAAAGTGAAGAATCAACTGAGAAATTATTGTCGAACTTGTGCGGGTCAGAAATTGCCTCTCGTTGATATATTCAGTGAAAAAGGAATACAAATGCGGTTGCAACAGCAAATGAAACACTTGAAAGAGATTAAGACGCATGACAATCTGTCAACGCAAATGTGCATGGACTGTATCTGTGATTTGAAAATGAGCTACAAATTTTTTATGCAGATCAAAAAGGCGCAGGTCAAATTGCAGTCCTTAAGTTCTTTACTGCACGGTAATTGTGCAACTCCCACTCGCACGAGCAGCGAGGAAGAAAAGTCTCGTCCCATAACAACGATTCCATTGACTAATAATCCCGAAAGAACGAGTTATGTCGCTAGAAAACCAGAAAACAAGAGATCAGAATCGTCGAATAAATCTTTGAGTCCTAAAAAAGTTGCCGGAGAGCCTGAATCTACAACGGAAAGAAATGATCCGATTGCGTCTACAACGACAAACGAGTGCGAAGTTGCGACCGAGTCAATCGCGAACCTAAGCGATGACAACGAATCGATCGAAGAATTCGATCCGGACGATCCGTCTTTTCGGTCGGACAACTGTGACGAAGAAATTGACAGTTTGATGGACAACTCAGAAAATTCTCAAGCGCGGCAAACTGAAAAAACGCAAGATAAGCAATCGGAAAACCCGATCGTACCTGCCAAAACAGAATCGAAAATCGATCGTAAGGCAGATCCTAACAAAGATGCTAACAAAACGGTTTACCAATACGACGCGAAATTGAAAGCTTATGTCAAAGTCGAACCTCCGGACGATGACGGGTATAAAGATGATCAGACTGAAACCGTGCCTGCCAAGGATAAACAAAAAATCGACAACAAACCCGAAGCAGCGAGCAAGGACTTGGGAAAACAGCCGAATATTCTCAAACGTAAGATCTCCATACACAAAGATTTTTTAGGGAATCCCGTGGCGTGCGTCAAGCAGTCGGATTCGACGCTCGTCAGATCGGGACCGAAAGAAATGAAAAAATCAAAATTAGATATAAAGAAACCAAACTTGGACTTGAAAAATCCGATGTTGGATTTAAAAAAGCCGTTGATGGATATAAAAAAGCCAAAGTTGGATGTGAAAAACGCTTTGAACGTCCCGAGCGAGAACGAGGACGGCATAATGTACGTCAAAGTGAAAGGAACTAAACCTAACGAGGTGCTGCTCGTGAAAGTCAAAAAAATGGATAAAGGGTTGGACAATAAGAAGCAGGATGAGAAAAAGAAACCGGCCGAGCCCTCGTTGCCGGTTGAAAAGCTTTTAAAAAAGCTCGAGCCATCGATTAAGAAAGAAACGGAATTTGAAATGGAGCGCTCGAAAGAGCTCGACATGAGGGAACGAAAAATTGCCGAACAGATCGAAGAGTACAAAAAAAGGCGAGAAAAAATCTTGGGCGGTAGTTCGGGAACGCCGAACGCTTTGAAGTTCGAAGATGGAACGATTCGTTTCGTGAATCCTGTAGAAAAGTCACCAACGCCGGTGGATAATGCTCCGCGAATGAAAATCGAGCCGGTCGACGACATCGACGACATTCGGCACTTCATTGGCTCGCCGAAATCGCAACGAATCAAGGAAGACACGAATAAAGCGAAAGACGATGACTCCGAAGCTTACGACAACGCTGGTGAATATTTGACGAGGTTGGCTAAATTGAAAAAAAAATGGGAAGAAGCGAAAAAAAAGAAGGAGAATTTAAAGCGCGAAATCAGCGAGTCTTACACCGAGGGGAACATGGAAAAATTGTCCCGCGTGCTCGGCGAGAGGGAAAAAAATTTGGCCGACTTTCAGAGTTATTTGAAACAACGTAAAATCATAATAAATCGTTTGACCGACGAAGACGTTATTTCGTTGTACGAGGATCGCAACAATGCGACGTCGAAAAAAAACTTTCCGGATCTCATCGACGCCACCGAGCCGTTGGACTACATCGCCGAGGAAGATTATCTCGAGTGCGATTATTGTCCCGAAACTTTTTCGCTTCGTGACGTACTCGAGGAACATTTAAAATCCCACGATTACAAGCTCATGTATTGGTGCGAAGATTGCCATTTGGAATTTCCAACGGTAAAAACAAAACGCGCTCACAACGCCGAATGCATCAATAAGCTCACTTGCCGTTATTGCCAAATCGTCCTCGATTCCAAGGGCAAAAAGAGGCAACACGAGCAAAAGCACGTCGACAATATGTACGGCCAAATGTGTGACGTTTGCGGCGAGAAATTCAAGCACCAAGCGACCCTCGATCAGCACTTCAAAACCCAACATATGACGTGGGAAAAAATATACCAGTGCACAAAGTGCCCCAAGAAATTCGCGTTTAAACAAAAATTGACTTTTCACATGAAATCGGTTCACACCACCCTGCGAGCTTGGTTGTGCGAAGACTGCGGTGCAGATTTCAAAAATCCAGCCAGTTTGCGACATCATCGAATCAGAAAACATCATCCAACTGGGAACAAACGGGAATGTCAGGTTTGCCACAAATTGGTACCCTTTTATAGTCTCTCGAAGCACATGTACACACACAAAGCGTACACGATACAGTGTCCGCACTGTGACAAGATGTTTAAAAACAGTTCGACTCTCAAGCAACATGTGAGAATCCACGAAGATCAACGACAATATCGTTGCGATACTTGTGGCGTGGGCTTCAATCGTCGTGATGGTTTGAGACTCCACATGCGAGTGCATCAGAAGTCTGACAGTCGTTCCCTCAAGGAATGCTCCTGTCAGATATGCTCTGAAAAGTTTCCCAACCACTCGATGCTCGTTATTCATAGGAATCGTGTACACAAGGACGGTCGACAGTACACTTGTCACATTTGCAATCGTTCGATGCTCTCTACGAGATCGCTCGAGTGGCACATGTCTCATATTCACAACGAAACTATCCCTGGTGGCATAAAATCAGAGGCTGAAACGCAGCCGGAAAAGAAACGAGTTTCTTGCGTCCATTGCGATAAAACATTCAAAACCGAAATGATATTAAGGACTCACATTAAGAACACACACATCGAAAAGAATCCTACTAAATGTTTGGACTGCGATGAAATGTTCACGTCCGACGTGCGACTCAGGCATCACATGATGATCGCCCACAACAGACTCGAGGGAACGCTCACTTGTCCCCACTGTCCCAAACGTTTTGTCAATCAGTTGCGCCTTAAAACTCACATGATATCGCACTCCGAGGATCGCCCCTATACCTGTGAGATATGCGGTTTTAATCTCAAAACTAAAATACAGTTGATAAAACATCATCAAAATCGACACAGCGACGAAAGACCTCTTCAATGTCGCTACTGCCCTTGGCGATGCAAACAAGTCAGCGCTCTCGTTTGCCACGAAAGAACTCACACCAACGAACGTCCCTATTCCTGCATCGTTTGTCGACAGAGGTTTAAGTATCTCGGTGATAAAAACAAGCATGAACGACGACACGAGAGCCTCGGTGGTTCAGGATTCAAGAGAATCGTTGCTGGCCGAAATGTCAAACAATCGAAACTTCAAACTGAAGAAACCTCAACCTCCGAACAGGAACAAATTGATTATGAAAACCAGGACGAGGAAGAACAACTCATCGAGGAACAACAGTCCGAAGAGTACAATGATGATAAATATACGGAAGAAGAAATCGTGAAATTCGAATCCGAGGACATTGGTGAAGAGTATGAACAGAACTACGAACAGGAATACGAGGAGACGTCGAGAGAAGCTTCGGACGCTGCCGAAGTAATAATGAACATGGAAGACACGACGGTGTACACAGAGGAAGTTACGGCGGACAATATCGAGACAGCGGAAATGATAACGGACGAAATGATAGCGGGTGATATGTTGCAACCGGACATAACCGTGGTTCATTTACAGCAGCAAGATGATTCCGGTAAAATACAAGTTATACCGGTAATGCTATCGCTTCCCGATCTCAGTGACTCGAGCGCCGAGGTGAATTTAGCGACTGCATCAATAATGTACAATAATTAA
Protein Sequence: MSESIKNASNLSVSENNDSKHFRENVKDDESNNDDLIRDLTSESIVTLDAVVSGNGNVQNTALSEVPAAGNVVSGGGMFIRNSGSIKIIQDAVPGQIKTCPSPASKSDREHDYSEVRRIITPEKSLKIFDKKACTIVKSNSASPLRAPQRRIQTPIQERMVSQVKNINDLKKVTPRVKLISSEPTTLAQLTNPLSTSVLEMKAVVTQEKVKNQLRNYCRTCAGQKLPLVDIFSEKGIQMRLQQQMKHLKEIKTHDNLSTQMCMDCICDLKMSYKFFMQIKKAQVKLQSLSSLLHGNCATPTRTSSEEEKSRPITTIPLTNNPERTSYVARKPENKRSESSNKSLSPKKVAGEPESTTERNDPIASTTTNECEVATESIANLSDDNESIEEFDPDDPSFRSDNCDEEIDSLMDNSENSQARQTEKTQDKQSENPIVPAKTESKIDRKADPNKDANKTVYQYDAKLKAYVKVEPPDDDGYKDDQTETVPAKDKQKIDNKPEAASKDLGKQPNILKRKISIHKDFLGNPVACVKQSDSTLVRSGPKEMKKSKLDIKKPNLDLKNPMLDLKKPLMDIKKPKLDVKNALNVPSENEDGIMYVKVKGTKPNEVLLVKVKKMDKGLDNKKQDEKKKPAEPSLPVEKLLKKLEPSIKKETEFEMERSKELDMRERKIAEQIEEYKKRREKILGGSSGTPNALKFEDGTIRFVNPVEKSPTPVDNAPRMKIEPVDDIDDIRHFIGSPKSQRIKEDTNKAKDDDSEAYDNAGEYLTRLAKLKKKWEEAKKKKENLKREISESYTEGNMEKLSRVLGEREKNLADFQSYLKQRKIIINRLTDEDVISLYEDRNNATSKKNFPDLIDATEPLDYIAEEDYLECDYCPETFSLRDVLEEHLKSHDYKLMYWCEDCHLEFPTVKTKRAHNAECINKLTCRYCQIVLDSKGKKRQHEQKHVDNMYGQMCDVCGEKFKHQATLDQHFKTQHMTWEKIYQCTKCPKKFAFKQKLTFHMKSVHTTLRAWLCEDCGADFKNPASLRHHRIRKHHPTGNKRECQVCHKLVPFYSLSKHMYTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHQKSDSRSLKECSCQICSEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMLSTRSLEWHMSHIHNETIPGGIKSEAETQPEKKRVSCVHCDKTFKTEMILRTHIKNTHIEKNPTKCLDCDEMFTSDVRLRHHMMIAHNRLEGTLTCPHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCIVCRQRFKYLGDKNKHERRHESLGGSGFKRIVAGRNVKQSKLQTEETSTSEQEQIDYENQDEEEQLIEEQQSEEYNDDKYTEEEIVKFESEDIGEEYEQNYEQEYEETSREASDAAEVIMNMEDTTVYTEEVTADNIETAEMITDEMIAGDMLQPDITVVHLQQQDDSGKIQVIPVMLSLPDLSDSSAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00829002;
90% Identity: -
80% Identity: -