Basic Information

Insect: Venturia canescens
Gene Symbol: -
Assembly: None
Location: scaffold:1-12427[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.4 2.7e+02 2.6 5.0 2 23 225 247 224 247 0.96

2 18 0.004 0.46 11.3 0.8 1 23 321 343 321 343 0.98

3 18 0.0034 0.39 11.5 0.9 1 23 392 414 392 414 0.98

4 18 7.1e-05 0.0082 16.8 0.8 1 20 480 499 480 501 0.94

5 18 3.1 3.6e+02 2.2 0.1 2 23 543 563 542 563 0.92

6 18 7.7e-06 0.00088 19.9 0.1 1 23 612 635 612 635 0.96

7 18 0.039 4.5 8.2 0.5 1 23 641 664 641 664 0.92

8 18 0.0056 0.64 10.9 0.1 3 23 674 695 673 695 0.95

9 18 0.0002 0.024 15.4 0.7 3 23 705 725 703 725 0.92

10 18 0.1 12 6.9 0.1 2 20 799 817 798 817 0.95

11 18 0.084 9.6 7.2 0.0 2 23 837 858 836 858 0.96

12 18 3.5e-05 0.004 17.8 1.5 2 23 878 899 878 899 0.98

13 18 0.044 5.1 8.0 0.3 1 23 922 945 922 945 0.88

14 18 0.15 17 6.4 0.0 2 23 997 1019 996 1019 0.94

15 18 0.00032 0.037 14.8 1.4 3 23 1041 1062 1040 1062 0.95

16 18 0.092 11 7.0 0.6 1 23 1073 1097 1073 1097 0.96

17 18 0.11 12 6.8 0.0 1 23 1102 1125 1102 1125 0.97

18 18 0.00093 0.11 13.3 0.1 2 23 1156 1178 1156 1178 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.4	2.7e+02	2.6	5.0	2	23	225	247	224	247	0.96
2	18	0.004	0.46	11.3	0.8	1	23	321	343	321	343	0.98
3	18	0.0034	0.39	11.5	0.9	1	23	392	414	392	414	0.98
4	18	7.1e-05	0.0082	16.8	0.8	1	20	480	499	480	501	0.94
5	18	3.1	3.6e+02	2.2	0.1	2	23	543	563	542	563	0.92
6	18	7.7e-06	0.00088	19.9	0.1	1	23	612	635	612	635	0.96
7	18	0.039	4.5	8.2	0.5	1	23	641	664	641	664	0.92
8	18	0.0056	0.64	10.9	0.1	3	23	674	695	673	695	0.95
9	18	0.0002	0.024	15.4	0.7	3	23	705	725	703	725	0.92
10	18	0.1	12	6.9	0.1	2	20	799	817	798	817	0.95
11	18	0.084	9.6	7.2	0.0	2	23	837	858	836	858	0.96
12	18	3.5e-05	0.004	17.8	1.5	2	23	878	899	878	899	0.98
13	18	0.044	5.1	8.0	0.3	1	23	922	945	922	945	0.88
14	18	0.15	17	6.4	0.0	2	23	997	1019	996	1019	0.94
15	18	0.00032	0.037	14.8	1.4	3	23	1041	1062	1040	1062	0.95
16	18	0.092	11	7.0	0.6	1	23	1073	1097	1073	1097	0.96
17	18	0.11	12	6.8	0.0	1	23	1102	1125	1102	1125	0.97
18	18	0.00093	0.11	13.3	0.1	2	23	1156	1178	1156	1178	0.96

Sequence Information

Coding Sequence: ATGAATGATATCGTCGATGTTCGGAATGTTGGGAACGTATGCAGGTTGTGTCTCTCGTCGAAGAAGCCAAAATCATCGGTCTTCGCTGATCAAGCTATCGCGGCTGTTTCACTCGCGTCGAAAATTCAAACCTGCCTTTCAATAGAGATTCTGACAAGCGATAAACTATCGACGTCTATATGTTCCGACTGTCTGAGAAGAGTGAATAAATGGCATTCTTACAAGGAGTATTGTCTCAGATCTCAGCAGAAATTGAAGCAGTGTTTAGTCCAATTGGCCGAGGGTGCTGGAAATATAAAAGTGGAACCGCCGGATGTCGACGAAGCGATGGAGGTGGGGGAAACAGTACCCCTGAGTTCGGACGAAGAAACTGAAGACGTGAACGACGTGTCAGACGGGTTAGATAATAATGAGACCCCCAGAAGAGCAACATCGATAAAAAGAGAATTGATAGAAGGAGATGAGAATCGAACAGTTGCTGGAGAATTTGCACGTAGCTCAGAATTGTTGTTGAATCCAATGGCAGTAGCCAGTCACAGGGAAGAAAGATCATCAGATGCGGATTCGACTGAGAAAACAAATTCATTGGGTCTGGAATCGAAGAAGGGGATGAAAAGAAAAGTTCGCCGAGGTCCATTGACGCATTATCGTGGTTTGCGTCGTTACAAGCAGAGATGTGCGCACTGCCAAATATATTTGCACTCGAAATACAGTTACTCAAAGCACATGGAACGTTTCCACAGTGGAAAAGAGATAGTTTCGAAGGGTTTACGTGTAAGAAAATTGATAAAAAGGCAAGGAGAAGAAAGTTCGTTGGCTGAGCAGAATTCAATAATTGAGGAAGAAGAAGGGATGGAAACGGAAATGGAAGTGGAGGATGTGGAAGACGAATTGATAAGCCTGGAAAAGGACGCACCGTTGACTCCGGTTCAGCAGAACATAATAAGCCAATTGAAGACATTTTCGTGTTACACTTGCGGAGTTTCTTTCGGCGATCGTCGGAGCACGTTGAATCACATACGCCAGCATATGCCAGATTTGAGACCGTACACTTGCATAGCTTGTTTGACAGAGTTTGCCGATCGTTCAGTTTACAAACTCCACTGCGGAGCATCTTTTCAATGCGCGATGAAAATAGCACTGGTAGTTCCCGAGCACGGTACGGAAAAATATTTCACTTGTAACATGTGCCTCAGGTCATTGGTGAACAGGAAAGAACTTCTGAGTCATTTATCGCGACATTCGGATCGGCAATACGAACAAATGATGGGTGGACCTTTTCGTCCCCCACCACGACTCGAACCAGTGTCCAGTGTGACAACTCCCCAGTTCGTTTCCGCGCCTTCGAACTCGAAAAATCCAAAACGTAAGGACGCAGCGATGAAAGGCGATCGTAAATTGCCTGCGCCCTACAACCACGGGGATCCCGCTCACAATCATCCGTGCACGTATTGCGGTATGATTTACAAACACAAGCAAAATCTGTCACGTCACATAATACTGTGCAAAAATTTGCCTGCCGAGTGTCGGGTGTGCTACAGATGCATCAATTGCGGCCTCACTTTTCTCGCATTCAACAAATTTCAAAACCACGTATCACAAGCGCACCACAAAAAAAACCACATCGTGTGTTATCGCTGCGACGCTAAAGTCAAGCCGAGCGATTTTGTGTCACATTACCGAGAACACTATGGCAACGGCGATGACCAATGGACCGAAGTGCCACCAGATCATGTTCGCGACGAGCTTGTGGTAGTTTCACCTCCAAGATACAGCAAGGCAAACGAAAGGAGTAATCCACGTTTATCGATAAAATCGGATCCGGGTGGAAACTTCGAGTGCGACTCGTGCGGCAAAGTATTCGCGAGTGTTCCGAACTTGAAGCGTCACGTGCGAGCGGTCCACGAGTTGCATGGTCGTTTCAATTGTTTCACATGCGCGAAAACATTCGCTCATGAGGAAGAATGGACGGAGCACGTGGAGTTGGAGCATAAGCGAGCTGCCGAGAGGGTTGAAAATTGTCCGGAATGTTCATCGGTGTTCGAGAGTCCGCAAGAGCTCATACTTCATCGTCGCGACGTTCACGGTCTCGAGGGTGAGGATCATCTCGCTTGTTATATATGCGGCAAGACTTTCGCAAGTGAGACGTCTCTGAAAATTCATCGCGGTCATCATTTCCGGGTTAATTCGAGATTGAGTATAGGAAACGACGGAGCGCGAGAGGGAGAAAAAACTTTAGCCACAGTGGGAACGACTACGACGACGATAATCGGAGGTAAAAATGTGAGCCCCGTTCGCAATAGCGATCAGGCTCGATCTGTCACTTCGCCGAGAGCGAGAAAATCATTTCCGAATGGAAGTCCGCTTGTCGGCCGAGTGGAACGCGGAGCCCTGCAATGTCAGGTATGCGATGATCGTTTCAACGACGTGACAGATCTTCGAAACCATCTGTGGGAAGTTCATTGTGCACGGAGCAAGCCTGAGAAACAATTTATCAGGGACAAATTACAGTGCGAGTTATGCACCAACGTTTTACCGGACGAAGAAAGTCTGGCAAGCCACATAAAGTGGCACGAGAATAATCCCATACTGAGTAACGGTGGGACAGCGAAACGCGAGCAGGCGCCTGCGCAGTGCGATTTGTGCGGCAAATTTTACAGTTCTATCGCTAATCTTCGTAAGCACAAAAAGCGTCACAAGGCAGCGCCATCTGTAGGGGGGGGCGTTAGTCGTGGGAGGAAACGTTGGTCTTTCGGCGAAGGATTTACTTGTGAGGTATGTCGCAAGATATTTGCCAGCAGATCGATCATGGATAAGCACAAATTGGTGGCACATCCGACGAGCAAAAAGGGCGGCAGTTCATCGAAAACGTCAACGAGCGATCGCAGAGCTTCGAATCCTGTGGATCATTATGTCAAACCGACCACCCTCGTGTCACCGCCCAAACGGAATTCCAATGTCTTTCCGGAAGATCGCAAACAATCGATCGTTTGTAATCTTTGCGGTAAAACAATGGCGGACATCAGAGTGTTGGTGAAGCATCGACAGGTAGTGCACAAAATAACGAACGATACGGATTTCGGTTTGGATCCTAATCATCTGAGCAGCCCTCAGGTGGCGTGTACATCTTGTCCAAAAAAGTTCACGAACCTATCGAACATGAGACAGCATTATACGAAAGTCCACGGGGCGAGCGCTGCCAATCGAGCAACGCGTTTTTCTTGCTCCTTGGACGGTTGCAACTTCACTTTCGAGACTCTAGCAGCGAAGCGAAATCATGAAAAAAGTCACGCGAATGTTGTGTACACTTGCGGTTTGTGTCCCCGTCAATCTCTGAGTCCTTCGTTAATGGCCGCCCACATGTTGACTGCTCACCGTGCTAATCGTGCCTCGAGCAACGACAAAATGACTCTTTGCAAAAAAATTCATATCGACAAATACGAGGTTCGCGGTGCGAACGGAAGAAAGTGTCCGATTTGCGAAATAACTTACCCCAATTACAAAGCTCTCAAAATACATTATTTGAAGATACACGAGGACGAAGCTTAG
Protein Sequence: MNDIVDVRNVGNVCRLCLSSKKPKSSVFADQAIAAVSLASKIQTCLSIEILTSDKLSTSICSDCLRRVNKWHSYKEYCLRSQQKLKQCLVQLAEGAGNIKVEPPDVDEAMEVGETVPLSSDEETEDVNDVSDGLDNNETPRRATSIKRELIEGDENRTVAGEFARSSELLLNPMAVASHREERSSDADSTEKTNSLGLESKKGMKRKVRRGPLTHYRGLRRYKQRCAHCQIYLHSKYSYSKHMERFHSGKEIVSKGLRVRKLIKRQGEESSLAEQNSIIEEEEGMETEMEVEDVEDELISLEKDAPLTPVQQNIISQLKTFSCYTCGVSFGDRRSTLNHIRQHMPDLRPYTCIACLTEFADRSVYKLHCGASFQCAMKIALVVPEHGTEKYFTCNMCLRSLVNRKELLSHLSRHSDRQYEQMMGGPFRPPPRLEPVSSVTTPQFVSAPSNSKNPKRKDAAMKGDRKLPAPYNHGDPAHNHPCTYCGMIYKHKQNLSRHIILCKNLPAECRVCYRCINCGLTFLAFNKFQNHVSQAHHKKNHIVCYRCDAKVKPSDFVSHYREHYGNGDDQWTEVPPDHVRDELVVVSPPRYSKANERSNPRLSIKSDPGGNFECDSCGKVFASVPNLKRHVRAVHELHGRFNCFTCAKTFAHEEEWTEHVELEHKRAAERVENCPECSSVFESPQELILHRRDVHGLEGEDHLACYICGKTFASETSLKIHRGHHFRVNSRLSIGNDGAREGEKTLATVGTTTTTIIGGKNVSPVRNSDQARSVTSPRARKSFPNGSPLVGRVERGALQCQVCDDRFNDVTDLRNHLWEVHCARSKPEKQFIRDKLQCELCTNVLPDEESLASHIKWHENNPILSNGGTAKREQAPAQCDLCGKFYSSIANLRKHKKRHKAAPSVGGGVSRGRKRWSFGEGFTCEVCRKIFASRSIMDKHKLVAHPTSKKGGSSSKTSTSDRRASNPVDHYVKPTTLVSPPKRNSNVFPEDRKQSIVCNLCGKTMADIRVLVKHRQVVHKITNDTDFGLDPNHLSSPQVACTSCPKKFTNLSNMRQHYTKVHGASAANRATRFSCSLDGCNFTFETLAAKRNHEKSHANVVYTCGLCPRQSLSPSLMAAHMLTAHRANRASSNDKMTLCKKIHIDKYEVRGANGRKCPICEITYPNYKALKIHYLKIHEDEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00265967;
90% Identity: -
80% Identity: -