Basic Information

Gene Symbol
ZFX
Assembly
None
Location
scaffold:135512-144628[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.1 1.2e+02 3.7 0.1 3 23 16 36 15 36 0.94
2 15 2.9 3.3e+02 2.3 3.9 1 23 938 961 938 961 0.81
3 15 0.0023 0.26 12.1 0.6 2 23 1046 1068 1045 1068 0.95
4 15 0.0028 0.32 11.8 0.1 2 23 1081 1102 1080 1102 0.97
5 15 2.1e-05 0.0025 18.5 1.4 2 23 1105 1126 1104 1126 0.97
6 15 0.011 1.2 10.0 0.3 1 23 1132 1154 1132 1154 0.95
7 15 2.1e-05 0.0025 18.5 4.5 2 23 1161 1182 1160 1183 0.95
8 15 0.095 11 7.0 3.7 5 23 1196 1214 1195 1214 0.97
9 15 1.9e-05 0.0022 18.6 1.5 3 23 1221 1242 1220 1242 0.97
10 15 0.011 1.2 10.0 0.5 2 23 1258 1278 1257 1278 0.97
11 15 5.8e-05 0.0067 17.1 0.7 1 20 1284 1303 1284 1306 0.92
12 15 7.2e-05 0.0083 16.8 2.7 1 23 1314 1336 1314 1336 0.99
13 15 0.002 0.23 12.3 3.2 1 23 1342 1364 1342 1364 0.97
14 15 3.9e-06 0.00044 20.8 3.9 1 23 1370 1392 1370 1392 0.99
15 15 0.00026 0.03 15.0 7.2 1 23 1398 1420 1398 1421 0.96

Sequence Information

Coding Sequence
ATGGAAATCGGAAATGTAGCAAATCCAGGAGGTGGGGCAGTCGCCTGTCCCGTTTGTACCCTTTATTTACGCGAGGGTATAAGCCTCCAAAGGCATTTGGACACTCATCCAAAAGAGCAAGTAATCGAAGCTCTTATAAAAGCAAGTACCTTGACGTCGTCCCCTGCACCTACGCCCGTCGCTCAGCCCGGTGTAAGCGCGCCTTCCAACTCTACGTCTCAACAACAATTGAACAACGGTGCACATATACCCGCTCATTCCTCCTTCCCTGTCAGTCCTGTTTTCGAATGTCCGCCTATAAACACCATGATGCCGCCTCAATTTGCGTCATTCAGCTATCAACAGTTTGTCAATAACGGCACCATGATGATACCTCAATACGCCATGGCTCCTCAAGCCAACCAAATGATGCAGATGCTGTACAATCCTTACGGTATGTACCAGCAACAACAAATACCAACCGTTCAGATGATATCTCCCATTGCTACTATTCCGACTACGAGAATAAGGCCGGTCGTCACAGTCGCCAATGAAGTTAATTCTCGGGGTGTTATCGAACAAACCGGTGTTACAACTGACCCCAAACAACAGATAGCCACAGAACTATTAGCGGAGCCGGAGCCCGAACGAATTTTACCTCATATAGAATTGCCAACAACACCCGCACCTGCCGAGGATGATCCTCTATGCGCAACGACGCAGGATTCTGAAGAAACCGATTCAGCGAGATCGAGGGTCGAACACAGAGGACAACAGACTCAAAGTAGTATGACGCAGCAGAGAGCAGCGACGGAACGACAGGATTATCAAGAAACTGACCAAAATCCATTGGGCGATAATTGTCAGACAAGTCCAACGGATGACAACAAATCGGAGAGTACCGTAGTTGAGAGCATTGAAAGAGAAGAAAGCAGGAGTAACGAGAGCCAGATACACTGCAAAGATATAGAATTCGGAGAAACCGAGAGCAGGGAATTTGCTGTTGACGTTTACGAGAATGAAATCGAGAAGCCTACCAGCAATAACGACATCGAGGCTGAAAATGAAGGGAACAAAGTCCAACAGAGAGATTTGTCCGTAGAGGCGAAAGAAGACGACGCGAATGATTCCGGAGTTACAACGACAGAGGAAGAGAATAACGCTCGGGTAGATTTAAAAGGAACAAGCCAGCCTGAAGTGGAACAGTTGGAAAGATTGTTGATAACGATTATGGAATCGAGCTTCGAAGCGAGTAGCGAGAAAAACAACGACGAGACAACGACGGAGAAAAATACGAGGGACGAGGATACAACGAGGAACGAGAACGACGTTACGGAATTTTCCAATTGGAATTTATCGCAAGACAAGAGGGAACAAGAGGAAACGTGCAAAAGATATAACGCCGAATTGCAGAACCAAGTTTTTAGTAAAATATTGAACGCGAGCTCCGAGAGTATCGACGAATTGGAGAACAATTTTAATAGTGCATATCGATACAGATGTAGCTTATCGGCACCCTCGTCGCCCGTTATTACGAAAAAACTCCATAGAACTTATTCCTTAAGATGCGACTATCGCTCGAACGAAAATCTTAATTTATATCCTTCTGGCTTTGAGGCCGGCGCAATGCAAGAACACGAGGAAGACGAGGCTAAACAGATGGAGGATAATTTCGATGAAGAAGACATGGAAATCGAGGAAATAGCAAGCCCTCATACGCCTTTCGTAAAACAAAGCGATTGTGGAGAAAGTGGTGTTTGCGCTGCCGTCGACGTCGCTGCGAGATCTCACACACCCCTGTCAGCGATAAGTGGTATATCCGGATTACGCGTACAAAACGATGATGATATGGTGAAAGAAGATCGGACGGAAAATTTGTTAAGATCTTTCGTTCCTATGGACACGGAAAGTACGAGCGACGAGGATGAGGAGGAGGAAGAAGAGGACGAGGAGGACGAAGACGAGAGCAACGATTCGGTGGACTCTTCACCGACGAAAAATCCGATGGATTGTTCGCTCAACGGACAAGATACGAAACGCAACGTCGAAGATTCTTGTCCGAGAGAACAGAGTACCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGTTAGGAAAGCGACGGAATCGAGTCAAATGTATCAGCAATCAGTTATAACGGAGCACGTGAGCTCCTTCACAACGATAAATTCACAACAACCGATAATAATTCACGAAAGTTATTCAATGTCGAGTAACAAATCGTTGCATAATAACGTATTAAATTTGTCGGAATTGGCGGCCGATCCAACAACGAGCACCGAGTTGTCTAAAAATTATCAAGCAGCTAAATCGATGAATCATATGCAATCGACCGAATTGTTGAACATTAACGAAGACGCTCACGCAGGACCTATGAACGTTTTCGAATTCGACGGACTTCAAATATTAGTTCCTAGTACATTCATAAGTGAATCATCGCAAAAAGCAATCAGCGCGACGAGCCAACAATCAATGACGAGTAGCGAGGGTGGTGAGGGTGGTGCCGGTATCGATGAGGAGGTAAAGAGCGTAAATATGCGTGCCGATGAAACTATGCCACCGCGTGGCGAATTGTCGGAACAGGAGAGCAACGGTTGTACGGAGCATTCGGCATGGCAGCTTTACATGGGCCAGGAATCGTCGCGGATGTCCACGTCTTACGATCTTATGGCTCGGGAGAGCTGGGAAGAGTCCGAGGGTTCGGATAACGAGGTCGGTGTACCGCTGCTCGACAGCAGATCTCTCGCAACGCACTTCACGTCGAGCCTCTTTCTCGATCGAGACCGTAAAACACCGACCAAACGAACTTTCAAGTGTTCACATTGTACGGAAGTGTTCGATTGCCCGAAAGAGCGTCGAGTTCACAGTACAACCGTTCACAAGGAAGCGGGTCCCAGTAGCAGCAACGATCCCACGAGTCAATCGGAATCAAAAGATATAAAACTTTTGGACGGTCGTATGAACGTGTTCGACGACATTTTCGTATCTGGTATTCATGTGCAGCAGCCGTTGTATCATCATCATCAACAACCGTTGTTACATCAGTTGCAGCCGCCACCGCAACCGGAGAATGCGAAAGCGGAGGCTGATCAGAAAGTCGATAGCCTGACGATACCACCAAATTTGGAGATTTCTTGTGCAATGTGTAGCCAACGTTTCAGCAGCGAGAGATCTTTGCAAGTTCACAACAGACGTGTTCACGGTACCGAGGTAGCACGGCGTCTCCAAGAAATCTCAAAGTGTCAGATCTGCAACGAGGAATTCCCTTCGGTAATGTTGTTCAATGCTCATTTGAAGATTCATCCACTGGAGTGCGCTCAGTGCGGCAAATATTTTTATCGCAAGCCAAATTTCAAGCTTCATATGAAACGACATCTCGGTATAAAACCGTTTCCTTGTACCGTTTGCGACAAAGCTTTCTTGACAAAACAAAAATTGGACGAGCACACGAACGGTCACACCGGCAATGCGCCGGTCAAATGTAATTTATGCAACGAGACTTTTCGTAGATATTCAAATTTAACTCAGCACAAGAATCGCCATCATCTTAACATAAAGAGAAAATTGAAGGATTACATATGCCACTGCGGCGAAGTATTTCACACGAAGAAAAAACTCGCTTGGCACAAAGAGACACACGACGAAAAACCGAAAGCTTGTACCTACTGCAACGAGAGATTTATACACATGGCTAGTCTGACGCGACACATGAGACGCGCGCACAATCGTCGTTTCGTACCGGATGCCCAACGTGAAAGCGAAAACGTTGAGTGTCCGATATGCAAGTGTATCTATTTAAGATCCTCGTTGTCGGTTCACATGAGGGTTCACAATGGTGAAAGACCCTACGAGTGTCAGGTTTGTTCCAAAGCGTTCAGTACCAAATGGAATTTACAATTGCACAAATGGACACACGCCGCACGCAGTACCAAACCCTTCAAATGCAATCAGTGCAGCGCTGCGTTTTATCGACACAGTGATTACACCGCTCATATGAACTCGCATCGTAACGTAAGGCCGTACACGTGCAATTATTGCGGTGCACAATTCATAAGAAAGTACAATTGTCTGAGACACGTTAAGGAACATGAGGAGAACAAGGCATACACGTGTGACGTTTGCAACAAAACTTTTCATCGTTCGTACTATTTGAAGGATCATTTGCGAGTGCATTCGGGTGCAAGACCCTATACGTGTCATATTTGCGGTAAATCGAGTAGCACCAAGTCCAATCATAACAAACACGTTAGAATTCACCATGCCCGAGAGCCTGTAAATACTGAAAATTAG
Protein Sequence
MEIGNVANPGGGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASTLTSSPAPTPVAQPGVSAPSNSTSQQQLNNGAHIPAHSSFPVSPVFECPPINTMMPPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGMYQQQQIPTVQMISPIATIPTTRIRPVVTVANEVNSRGVIEQTGVTTDPKQQIATELLAEPEPERILPHIELPTTPAPAEDDPLCATTQDSEETDSARSRVEHRGQQTQSSMTQQRAATERQDYQETDQNPLGDNCQTSPTDDNKSESTVVESIEREESRSNESQIHCKDIEFGETESREFAVDVYENEIEKPTSNNDIEAENEGNKVQQRDLSVEAKEDDANDSGVTTTEEENNARVDLKGTSQPEVEQLERLLITIMESSFEASSEKNNDETTTEKNTRDEDTTRNENDVTEFSNWNLSQDKREQEETCKRYNAELQNQVFSKILNASSESIDELENNFNSAYRYRCSLSAPSSPVITKKLHRTYSLRCDYRSNENLNLYPSGFEAGAMQEHEEDEAKQMEDNFDEEDMEIEEIASPHTPFVKQSDCGESGVCAAVDVAARSHTPLSAISGISGLRVQNDDDMVKEDRTENLLRSFVPMDTESTSDEDEEEEEEDEEDEDESNDSVDSSPTKNPMDCSLNGQDTKRNVEDSCPREQSTSSSSSSSSSSSSVRKATESSQMYQQSVITEHVSSFTTINSQQPIIIHESYSMSSNKSLHNNVLNLSELAADPTTSTELSKNYQAAKSMNHMQSTELLNINEDAHAGPMNVFEFDGLQILVPSTFISESSQKAISATSQQSMTSSEGGEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEHSAWQLYMGQESSRMSTSYDLMARESWEESEGSDNEVGVPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSHCTEVFDCPKERRVHSTTVHKEAGPSSSNDPTSQSESKDIKLLDGRMNVFDDIFVSGIHVQQPLYHHHQQPLLHQLQPPPQPENAKAEADQKVDSLTIPPNLEISCAMCSQRFSSERSLQVHNRRVHGTEVARRLQEISKCQICNEEFPSVMLFNAHLKIHPLECAQCGKYFYRKPNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKRKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLSVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKDHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00263741;
90% Identity
iTF_00265938;
80% Identity
-