Basic Information

Insect: Venturia canescens
Gene Symbol: ECU06_1150_1
Assembly: None
Location: scaffold:153411-156041[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0012 0.14 13.0 0.2 2 20 35 53 34 55 0.94

2 16 0.17 19 6.2 1.9 1 23 100 123 100 123 0.97

3 16 0.0007 0.081 13.7 1.6 1 23 157 179 157 179 0.98

4 16 1.3e-05 0.0015 19.2 1.3 1 23 185 208 185 208 0.96

5 16 6.3e-06 0.00072 20.1 1.1 1 23 214 236 214 236 0.98

6 16 1.1e-07 1.3e-05 25.6 1.2 1 23 242 264 242 264 0.98

7 16 1.5e-05 0.0018 18.9 1.4 1 23 270 292 270 292 0.98

8 16 3.4e-06 0.00039 21.0 2.5 1 23 298 320 298 320 0.97

9 16 0.17 20 6.2 0.4 2 14 327 339 326 340 0.89

10 16 6.7e-05 0.0077 16.9 0.2 2 23 368 390 367 390 0.96

11 16 3.2e-05 0.0036 17.9 0.6 1 23 479 502 479 502 0.95

12 16 0.00056 0.064 14.0 0.3 1 23 508 530 508 530 0.98

13 16 5.8e-07 6.6e-05 23.4 1.4 1 23 536 558 536 558 0.99

14 16 0.0035 0.41 11.5 4.3 1 23 564 586 564 586 0.99

15 16 7.3e-05 0.0084 16.8 2.6 1 23 592 614 592 614 0.96

16 16 2.6e-05 0.0029 18.2 2.8 1 23 620 642 620 643 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0012	0.14	13.0	0.2	2	20	35	53	34	55	0.94
2	16	0.17	19	6.2	1.9	1	23	100	123	100	123	0.97
3	16	0.0007	0.081	13.7	1.6	1	23	157	179	157	179	0.98
4	16	1.3e-05	0.0015	19.2	1.3	1	23	185	208	185	208	0.96
5	16	6.3e-06	0.00072	20.1	1.1	1	23	214	236	214	236	0.98
6	16	1.1e-07	1.3e-05	25.6	1.2	1	23	242	264	242	264	0.98
7	16	1.5e-05	0.0018	18.9	1.4	1	23	270	292	270	292	0.98
8	16	3.4e-06	0.00039	21.0	2.5	1	23	298	320	298	320	0.97
9	16	0.17	20	6.2	0.4	2	14	327	339	326	340	0.89
10	16	6.7e-05	0.0077	16.9	0.2	2	23	368	390	367	390	0.96
11	16	3.2e-05	0.0036	17.9	0.6	1	23	479	502	479	502	0.95
12	16	0.00056	0.064	14.0	0.3	1	23	508	530	508	530	0.98
13	16	5.8e-07	6.6e-05	23.4	1.4	1	23	536	558	536	558	0.99
14	16	0.0035	0.41	11.5	4.3	1	23	564	586	564	586	0.99
15	16	7.3e-05	0.0084	16.8	2.6	1	23	592	614	592	614	0.96
16	16	2.6e-05	0.0029	18.2	2.8	1	23	620	642	620	643	0.96

Sequence Information

Coding Sequence: ATGACTCCCGGGATTTCGCAAGAGCCCTCAATAATCGGTAACGATCGATCCATCGGTGTCGGTAAAAAAAATGCACCAAATACGCACAGTATTGGTACGCTATCGTGTGACAAATGTGCAAGAGTATTTAAGAGAGAAATTAATCTGAGCAGACATCGAGTTAATTGTCGCATAAGAAACGAAAAAGAAGATGCAAGACGCAAGGAAAGTGATGATACGGAAATTATTGAATCACTCATGATTGCGGAAACTTTGAATTCGTCTCGGGGTTCCGGAATTACTGATAAAAGTTCGAGCTATCGATGCTATTTCTGCGATTATACGACGGGGGAAAAAAAATTAATAAAACTTCACTTACGTCAGAACCACGAAGAAACTGCGGAGAAGAATAAAAAAAGAAAAAAATATGGCGACGTGCCGGAGGAAATAGTGGTTAAGGCGAGAATGGAAGCAAACGGTCGTGTCTATTATCATTGCAACGAGTGTGGCAAAAATCTATTTTCTCTTTATACGTTCGCGGGGCATATGAGAATCCATACGGGCGAGAGACCATACACTTGTCACTTGTGTGGCAAACAATTTCGCGTTAATCAGGGCTTGGCTCGTCATTTGCAAGAGACTCACGCAGGAATTAAAAAATTTTCCTGTGACATCTGTTCTCGTATGTTCTCGACGAAACGCAACGTCGAGGATCATCGACGTATCCACACCGGCGAGCGTCCCTTCGTTTGCAACGTATGCGGCAAAACTTTCAAGCAAAAAGCCTCGCTATTTGTTCATAATCGTACACACACGGACTTTTTTCCGTTCAAATGTAATTATTGCAATCAGGCCTTTCGTACCAGACCATCCCTCGTTCTACATCTTACGAAACACACCGGTGAGAGGCCTCATACATGCGATATATGTGATCGTTCTTTTCGCATCAAGTATGACCTCAAACGTCATCGCCTGGTACATTCGGATGAAAAACCTTGGCGATGTACCGACTGCGATATGGACTTTCGACAGAAGCGGTCCCACATAGAATTTTACGTAAAAAAGGATGATACCCTGATAAAGAGGATCGATGAGAGCAACGATGGTCCGGTGGAAAGCACGCGGTGTGATAAATGCGATAAAAGTTTCTCCGAAATACCTCAACTTGTCGAACACTTGAGGATCGAACACGACGACGATCACGTTTATTATTGTCACTGTTGTGAAAATTTGTTTCGAGGACCGGAGGAGATATTTTACGAGCACATCCGGGATCACGAACGCGAGCATGAAGCAATAAATAATGAGAAATCGGATAACTTGTTGCATTCATCGAGCGAAATTTTTGCGAAAACAAAAATTTGTAAAGATGCGCCAACATCGATGGAAGACGATGACGATTCATCAGTTCCCGAACGCGTAACAACGTTCGAATCTCCAAAGACAAAGACTTCGTACATGTGCGAATTTTGTGGCAAAACGTATAACTCGTTGTTGAATCTTCGCACTCATCAGATAAATGTTCACGCTGGCTTGAAACTGTTCATGTGCGACTTTTGCGAGCGCAACCTTGCGTCGGAATCGGCACTGGAGAATCATCGACGCTCGCACACCAAAGAATCGCCCTACCAGTGTGAATACTGCGATAAAAAATTTCGTACCGCGAATTCAATGTACGCTCATCAACGTATACACGAGGATCGTAAACCTTACGTTTGCACCAAGTGCGACGAAAGATATCTCACGAAAAAGTGCTTGACGGAACATTTGAGAAAGCATGGAGAAAGCACCTCTTATATTTGTGAAACGTGCGGCAAAAGTTTCGCCGTCAAGAGAAATTTCTTGAGACACTGCCGAGTTCACAGTGTGGACGAAATCTTCGTTTGTCCGTATTGCCCCTCAAAGTTCCGACAAAAAAGATATCTAAGAGTACACACGCAGATTCATCATCCCGGTGAATGA
Protein Sequence: MTPGISQEPSIIGNDRSIGVGKKNAPNTHSIGTLSCDKCARVFKREINLSRHRVNCRIRNEKEDARRKESDDTEIIESLMIAETLNSSRGSGITDKSSSYRCYFCDYTTGEKKLIKLHLRQNHEETAEKNKKRKKYGDVPEEIVVKARMEANGRVYYHCNECGKNLFSLYTFAGHMRIHTGERPYTCHLCGKQFRVNQGLARHLQETHAGIKKFSCDICSRMFSTKRNVEDHRRIHTGERPFVCNVCGKTFKQKASLFVHNRTHTDFFPFKCNYCNQAFRTRPSLVLHLTKHTGERPHTCDICDRSFRIKYDLKRHRLVHSDEKPWRCTDCDMDFRQKRSHIEFYVKKDDTLIKRIDESNDGPVESTRCDKCDKSFSEIPQLVEHLRIEHDDDHVYYCHCCENLFRGPEEIFYEHIRDHEREHEAINNEKSDNLLHSSSEIFAKTKICKDAPTSMEDDDDSSVPERVTTFESPKTKTSYMCEFCGKTYNSLLNLRTHQINVHAGLKLFMCDFCERNLASESALENHRRSHTKESPYQCEYCDKKFRTANSMYAHQRIHEDRKPYVCTKCDERYLTKKCLTEHLRKHGESTSYICETCGKSFAVKRNFLRHCRVHSVDEIFVCPYCPSKFRQKRYLRVHTQIHHPGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -