Basic Information

Insect: Vanessa tameamea
Gene Symbol: -
Assembly: GCA_037043105.1
Location: CM073305.1:5732397-5740539[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.024 1.8 9.6 4.2 1 23 543 565 543 565 0.97

2 9 1.9e-05 0.0014 19.4 1.7 1 23 612 635 612 635 0.97

3 9 0.00018 0.013 16.3 0.1 3 23 642 662 641 662 0.98

4 9 3.4e-06 0.00025 21.8 4.5 1 23 668 690 668 690 0.98

5 9 7.1e-05 0.0052 17.6 0.2 3 23 697 717 696 717 0.99

6 9 5.1e-06 0.00037 21.2 0.9 1 23 726 748 726 748 0.99

7 9 4.5e-06 0.00033 21.4 0.8 1 23 754 777 754 777 0.94

8 9 0.84 62 4.8 2.2 1 12 783 794 783 807 0.87

9 9 1.1 83 4.4 4.0 1 23 814 837 814 837 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.024	1.8	9.6	4.2	1	23	543	565	543	565	0.97
2	9	1.9e-05	0.0014	19.4	1.7	1	23	612	635	612	635	0.97
3	9	0.00018	0.013	16.3	0.1	3	23	642	662	641	662	0.98
4	9	3.4e-06	0.00025	21.8	4.5	1	23	668	690	668	690	0.98
5	9	7.1e-05	0.0052	17.6	0.2	3	23	697	717	696	717	0.99
6	9	5.1e-06	0.00037	21.2	0.9	1	23	726	748	726	748	0.99
7	9	4.5e-06	0.00033	21.4	0.8	1	23	754	777	754	777	0.94
8	9	0.84	62	4.8	2.2	1	12	783	794	783	807	0.87
9	9	1.1	83	4.4	4.0	1	23	814	837	814	837	0.93

Sequence Information

Coding Sequence: ATGTTGCATAATACAGGACAGTTTGGAAGCGATGTTCCAATGAACGTAAATCCTCAAACAAACATGACATCGATGAACGATAGAATGAACAttgataataacataaataatttgggtAAAATAGCCCATCCTCAACCTCAGCCGTCTTCACACTTCAATTTACCGGATTACGGTACTTACGgcttaaatatgaatacaaatttGAGTCACTTTCAAAATTTTCACCCGATTGGCTTTCAACCGAGTAACATAGCCCCTAATCCGATGCACGACAGTTGGCAGACGAGCATGTTGCCAATGAATCTGAACATGCACAGTGATCAGCATAGCATGCTCGGCTATCAATACGGTAAGCCGGATCCTTACACCGAAAACAAAGAGCACAGTGTTAATAAGACGTTGAACATACCGCAAGTCCAAACGAAGGCCTTTCACAAGCAAATGGGCATGGATGCCCACAACTATCAGTGTTACAAACCTAATTTTAGACAATACACAGATTATAGTTTACATATGAACGCTAAATCAAAACCGGACTTACATAAACAGATGGGTGGTTATTCTCACTTAGATAAAGAGAGACTCGTATCTCCGCGGCCGACGTACTACGAACAAAATATAGACTTAAGCAACAAACCTCAGAAAATGTTGAATATCTTTTCAAGTCCATATCAAAGCCCTGAAATAAATGTACCGTTGAATAATCATGAAAATGGAGGCAACCAAGATAACCTTGATTTGAGTGCAAAATTACAGAAATATACACCTGTCGTACAGAAACCTTTAAACACATACGAAGAACCGGTGTTAAGACAAGATGTTATCCCTCAAAAGACAGGTGAGCCTAGTTTCTCGGAAAATCTCAATATTACCAAACCCCAAAACCTTGAAACCAATTTGACTCCAAATTATCCCTACATTAGTTCAGATTTAGGCAAAGGGTTTTTGAAAGACCAAGATTCAAGAAGACGTAGCTTGGAGAATACCGTAAAGatgatagaaaatattttgtcacaTTCGTCAAATTCAAGGAAAAGCGATTACATTAGTCAGGATAGCCCTTCAGACGATCGAGACTTAACAGATAAGACTAAATCAAACTTAAGAGAATCGGAAGCATTGGTTTCAAACAGTAGTCAAGCATTGAACAGTCAATCAAATTCACCGTCACCATCGAATTACTCTGACGATGAATCAAGTCAAGAGAGTACAAATGTAAGTAACGATAAAATGGACACTGAAGACGAAAATATCACTAAAACTGATCCAAATGCGGAATCTGCTAATACTGATAACAGCAATAATGAAAACAACAAAGCGAAAACTGGTAAAGATAGTCAGAGTGCCAGCGAAGAGGAATCATCTGATAGTGAAGATGTTAAACCTCCTTTAATGACGGACAATAATGCGTCGACAGaacatgaaattattatagataactCTGTCATAATAAAAGTTGAAGTTGTACCGAGTATTGTCGACATGGAACATTTGAATCCGTTTCACCGAGACATATTCGGTATACAGAATGAAGATGTAGCGAATAATGATATAATAGATTCTGAAAGTAGTATTAACGTCGCAAAAGAAGTTATAAGGAAcgGTGCATCTGTAAAAGGCGCATTCTTCGAATGTCCCCACTGCAACTTGTACTTCAATCATCCGAAGCGATTCCTAATCCACACGAAGTGGCACTCCTTCGGCCTGACCAACGAGAAGAGACTGGAACTTCAGAAGGAGAAGGAGATGAGACGGAACATGAGGAAGGAGGCGAGAGTGGTCGAGCGAATGAATCAGAGCGAGGTGACCGATGTAAATACTCCGGGACGGAAGTTCAGCTGTAAGGACTGTGATAAAGTGTTCAACGCAAAGGCCAGTTTGAAGAATCATAAACAAAGGTATCACCCAACTCGGTCTCGAGACTGTAAGATCTGCGGGAAGACCCTCACGGGCTGGATGGCGCTGCGGGCTCACCTCGCGACCCACACCAGCGACTCGGGCTACCAGTGCAGCGACTGCCCCAAGAGATTCAAACATCCACACTCGTTGGCCAAGCATAGAGATACACACTTAGAGAAGACGCACGGCTGCGCGCAGTGCCCCAAGAAGTTCGGCTCGCGCGCGCTGCTCAACGTGCACATGAAGACACACGAGCGCGTGCTGCGCGGCGCCACGTTCCGCTGCACGTACTGCGGGAAGGGCTTCTTCGAGGCCTACAGCCTGCAGGTCCATGAGCGCACCCATCGGAACGAGAGGCCGTTCCTCTGTGAGATATGCAACACCAGCTTCGGCACCAACTCCAGTCTGAAGAGGCATTTGAAAGTTTCACACAGCACATCGAAGCCATTCGAATGTTCGACGTGCCACCGCTCCTTCATATCGGAGGCCATCCGCGACCGCCACTCGCTGAGGAACCACGGGAACCCGGAGGACTTCAAGTTCCTCTGCAAGCAGTGCCCGTGCAAATACCTGAAGCTGAAGGATCTGCGGAAGCACATGTACAAGGTTCACCCCAAGGGCAAGAGGAAGAAAAAAGTTCAATCGGACAGCGAGTGA
Protein Sequence: MLHNTGQFGSDVPMNVNPQTNMTSMNDRMNIDNNINNLGKIAHPQPQPSSHFNLPDYGTYGLNMNTNLSHFQNFHPIGFQPSNIAPNPMHDSWQTSMLPMNLNMHSDQHSMLGYQYGKPDPYTENKEHSVNKTLNIPQVQTKAFHKQMGMDAHNYQCYKPNFRQYTDYSLHMNAKSKPDLHKQMGGYSHLDKERLVSPRPTYYEQNIDLSNKPQKMLNIFSSPYQSPEINVPLNNHENGGNQDNLDLSAKLQKYTPVVQKPLNTYEEPVLRQDVIPQKTGEPSFSENLNITKPQNLETNLTPNYPYISSDLGKGFLKDQDSRRRSLENTVKMIENILSHSSNSRKSDYISQDSPSDDRDLTDKTKSNLRESEALVSNSSQALNSQSNSPSPSNYSDDESSQESTNVSNDKMDTEDENITKTDPNAESANTDNSNNENNKAKTGKDSQSASEEESSDSEDVKPPLMTDNNASTEHEIIIDNSVIIKVEVVPSIVDMEHLNPFHRDIFGIQNEDVANNDIIDSESSINVAKEVIRNGASVKGAFFECPHCNLYFNHPKRFLIHTKWHSFGLTNEKRLELQKEKEMRRNMRKEARVVERMNQSEVTDVNTPGRKFSCKDCDKVFNAKASLKNHKQRYHPTRSRDCKICGKTLTGWMALRAHLATHTSDSGYQCSDCPKRFKHPHSLAKHRDTHLEKTHGCAQCPKKFGSRALLNVHMKTHERVLRGATFRCTYCGKGFFEAYSLQVHERTHRNERPFLCEICNTSFGTNSSLKRHLKVSHSTSKPFECSTCHRSFISEAIRDRHSLRNHGNPEDFKFLCKQCPCKYLKLKDLRKHMYKVHPKGKRKKKVQSDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01507508;
90% Identity: iTF_01506624;
80% Identity: -