Basic Information

Insect: Vanessa tameamea
Gene Symbol: ikzf1
Assembly: GCA_037043105.1
Location: CM073306.1:4654488-4664386[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00035 0.026 15.4 2.3 1 23 211 233 211 233 0.98

2 12 0.62 45 5.2 0.1 1 23 240 263 240 263 0.93

3 12 0.59 43 5.3 1.1 1 23 267 289 267 289 0.95

4 12 0.072 5.3 8.2 0.9 1 23 294 317 294 317 0.94

5 12 0.0037 0.27 12.2 0.4 1 23 321 344 321 344 0.95

6 12 0.12 8.9 7.4 1.5 2 21 352 371 351 372 0.95

7 12 0.0048 0.35 11.8 0.1 3 23 385 406 384 406 0.94

8 12 0.00062 0.045 14.7 1.6 2 23 412 434 411 434 0.95

9 12 0.0001 0.0077 17.1 0.9 2 23 454 475 454 475 0.97

10 12 9.7e-05 0.0071 17.2 2.2 1 23 481 503 481 503 0.98

11 12 1.9e-06 0.00014 22.6 2.4 1 23 509 531 509 531 0.98

12 12 1.4e-06 0.00011 22.9 3.2 1 23 537 560 537 560 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00035	0.026	15.4	2.3	1	23	211	233	211	233	0.98
2	12	0.62	45	5.2	0.1	1	23	240	263	240	263	0.93
3	12	0.59	43	5.3	1.1	1	23	267	289	267	289	0.95
4	12	0.072	5.3	8.2	0.9	1	23	294	317	294	317	0.94
5	12	0.0037	0.27	12.2	0.4	1	23	321	344	321	344	0.95
6	12	0.12	8.9	7.4	1.5	2	21	352	371	351	372	0.95
7	12	0.0048	0.35	11.8	0.1	3	23	385	406	384	406	0.94
8	12	0.00062	0.045	14.7	1.6	2	23	412	434	411	434	0.95
9	12	0.0001	0.0077	17.1	0.9	2	23	454	475	454	475	0.97
10	12	9.7e-05	0.0071	17.2	2.2	1	23	481	503	481	503	0.98
11	12	1.9e-06	0.00014	22.6	2.4	1	23	509	531	509	531	0.98
12	12	1.4e-06	0.00011	22.9	3.2	1	23	537	560	537	560	0.98

Sequence Information

Coding Sequence: ATGTGTGATTTACTCGTGTGTCGAGTTTGTCTCGCTACGGATGACGTtaaattgtacaatatatacaagtataatcTAATAGAagcttataaaaacataactggAGATCAGTTATTAAAAGCTGAAGATGGTCTACCAGAGTTCATTTGCAGCTATTGCAGTACACTGTTGCTCAAATATGTGGCATTCAAGGAGAAATGTTGCGACACTCGATCAATTCTTACGTATGCATCTCAAAGACAGCTAACAACAAATGACATACGCTCTATCAACCAACAGTATAAACTACCTTACACGATATCAACAAACTACCCAACGATAAACATGGAAAACACAGAATACTCTGAACCGGTTATAAAAGAGGAGAGCATCGTCATCGAATCCCCCCTGATAATGGAGTATGAAACAGAAACAAAGAAGAAGAAAGTTAAGAAGAAAAAAGAGAAAATCAATActgatttgataaaatttgaagaTGAGGTCTTCAATGATGTCAGTTTTGAAGGTCACGACATCGATGTCAATGATGATGCAGAGTTGAAGGACATAGAAGTCAATATATTGACTAAGGAGGAACAGCTCCTGGAGATTGAGGAGAGGAAAACGTCATCGAATTACGTTAATTCGTTCTATAAGTGCGATTTTTGTTATAAAGGTTTTATAATGGCCTCGACTTACAGGAATCACATGACCAAACATGATCcgGAGCGAGGAGACTTTGTCTGCGAGGTGTGCAAGTCCCGCTGGGCGGACGCGCGCTCGCTCCGCGCGCACGTTCTCAACACGCACGAAAAGAAATACGTGTGCAAGCTGTGCGAGTACGTGTCCAGAAACATtcacaGGGCAAAGGAACATTTGAAGTGGCACAAAGGTTTTATGTTTGAATGCAAAATCTGTGGAGCTCTATTCGCCAAGTCGACGAGTCATCTAACGCACATTCGTCTCCAGCATCCTTCGAGCCACGCCTGTGAGCTCTGCGGCGAATCGTTCATTGGTGAATTTGGATTGAGAATGCACAAGAAAAAAGTTCACAACGCCGACAGCTTAACTTCTCAATGCGAGAACTGCAGTACGAAGTTTCATTCCGTTAAGGCGATGAAGAGACACCTGAAGCTGTCCAAGGATGATATTTGTGACTCGAACATCAGGCCGTGTCAGTATTGTGGTGATGGCTTTGAAACGGAAGATGCGTTGAAACAACATTTGAAGGACAACCACGAAGATGAGAGCCTGTATTGTGAAGAGTGCGCGCGCAGCTTCACGAGCGCGCGCTCGCTGTGCACGCACCGCGAGCGCGTGCACCTGGGGGTCAAGCGCGCCGTGCGCCGCCGCGTGCCCAAGCGCGCGCACGACAGCGCCGTCTGCGAGGTCTGCGGCCTCACCTGCATCTCCAAGGCCACGCTGATGTATCACCAGCGAACGCACACGGGCGAGAAGCCGTACCACTGCACGCAGTGTCCGAAGAAGTTCAGCATAATGCAACTGCTACAGATACACATCCGGACACACACAGGTGAGAGGCCGTTCAAGTGTCAGAACTGCCCAAAGGCCTTCAAGCACAAAGCCGCTCTGAACAGACACAACAGGgtcCACACGGGCGTGAAGCCCTACAGCTGCCCCCATTGCAATAAGTCCTTCACACAGTCAAATTCAATGAAGTATCATATCAACACCGTACACCTCAAACTACCGGCGCCGTACAGAAACAGGCGAAATAAACTAGACGTAACGAcagactataaataa
Protein Sequence: MCDLLVCRVCLATDDVKLYNIYKYNLIEAYKNITGDQLLKAEDGLPEFICSYCSTLLLKYVAFKEKCCDTRSILTYASQRQLTTNDIRSINQQYKLPYTISTNYPTINMENTEYSEPVIKEESIVIESPLIMEYETETKKKKVKKKKEKINTDLIKFEDEVFNDVSFEGHDIDVNDDAELKDIEVNILTKEEQLLEIEERKTSSNYVNSFYKCDFCYKGFIMASTYRNHMTKHDPERGDFVCEVCKSRWADARSLRAHVLNTHEKKYVCKLCEYVSRNIHRAKEHLKWHKGFMFECKICGALFAKSTSHLTHIRLQHPSSHACELCGESFIGEFGLRMHKKKVHNADSLTSQCENCSTKFHSVKAMKRHLKLSKDDICDSNIRPCQYCGDGFETEDALKQHLKDNHEDESLYCEECARSFTSARSLCTHRERVHLGVKRAVRRRVPKRAHDSAVCEVCGLTCISKATLMYHQRTHTGEKPYHCTQCPKKFSIMQLLQIHIRTHTGERPFKCQNCPKAFKHKAALNRHNRVHTGVKPYSCPHCNKSFTQSNSMKYHINTVHLKLPAPYRNRRNKLDVTTDYK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01506661;
90% Identity: iTF_01079285;
80% Identity: -