Basic Information

Insect: Vanessa tameamea
Gene Symbol: -
Assembly: GCA_037043105.1
Location: CM073304.1:1915355-1920447[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0029 0.21 12.5 1.7 3 23 200 220 200 220 0.99

2 10 0.18 13 6.9 0.1 2 23 247 269 246 269 0.94

3 10 0.0014 0.1 13.6 1.8 1 23 290 312 290 312 0.98

4 10 0.0024 0.17 12.8 2.5 1 23 316 338 316 338 0.97

5 10 1.7e-05 0.0012 19.6 0.2 1 23 343 366 343 366 0.95

6 10 0.037 2.7 9.1 1.4 1 23 372 395 372 395 0.90

7 10 8.5e-07 6.2e-05 23.7 2.0 1 23 402 425 402 425 0.98

8 10 0.0003 0.022 15.6 3.5 1 23 431 453 431 453 0.98

9 10 4.3e-07 3.1e-05 24.6 1.7 1 23 459 481 459 481 0.98

10 10 0.0001 0.0074 17.1 3.1 1 23 487 509 487 510 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0029	0.21	12.5	1.7	3	23	200	220	200	220	0.99
2	10	0.18	13	6.9	0.1	2	23	247	269	246	269	0.94
3	10	0.0014	0.1	13.6	1.8	1	23	290	312	290	312	0.98
4	10	0.0024	0.17	12.8	2.5	1	23	316	338	316	338	0.97
5	10	1.7e-05	0.0012	19.6	0.2	1	23	343	366	343	366	0.95
6	10	0.037	2.7	9.1	1.4	1	23	372	395	372	395	0.90
7	10	8.5e-07	6.2e-05	23.7	2.0	1	23	402	425	402	425	0.98
8	10	0.0003	0.022	15.6	3.5	1	23	431	453	431	453	0.98
9	10	4.3e-07	3.1e-05	24.6	1.7	1	23	459	481	459	481	0.98
10	10	0.0001	0.0074	17.1	3.1	1	23	487	509	487	510	0.95

Sequence Information

Coding Sequence: atgaatGAAAGTGATGTTAGTACAAAGTATGGTGAATGTCGATGCTGTTTAACTATGGGGGAGCACAGAGACCTGATGCTAGAATACGAATGGAACGGATCACgcgaagtttattttaaaatatttttagaatgtttCAATCTATtcCTATCAACAAATTCCAGAAAGAGCACACTGATATGCACAACATGTATCCTCCGACTAAGAGATGCAAGTAGTTTTAAAAAGATGGTCCTTGAAGCTGAGCGGAATCTGCTTAGCTATAATCTCAACCGAGACAATTCCATAGTACAATTACAGGACTTGCAAAAGCCGATTGAAAATGAAGAGAATGAacaattgtttgaaataaaaaatgagaaaTTTGACAATTCGGAAGGCAGTGATATTGAGCAAAATGAAGCCAATTCGGACACAGATGGCTTGGAAGAAGATATagTAAAAATCACCAACAAAAGCTACACAGATTCAATAAGAGAcacgttttgtaaaataaaaaacaacaatcgAACCGAGAAACTCGCCTATATTTACAACGCTAGCGTCATCCTAGAAAATTCTAACGTGACACCATTCAAACCGAAGCACCAAAACGGTTGTTTCTACTGTCGTATGATATTCGACGATTTATCTAAATTGCGAGAACATCAAAAGAAACATACTAAAGCTGAATTGAAACGGGTTCTGAGATCATATGGCGCGGAAAATTTCGTTGTATACGTTGACGTCACAGATCTTAAATGTACAATTTGCAACGAAcccgttctaaatttaaacgaattaaaaattcatttaataaaagaacACAAAAAGAAAATGCAAGAATTCCCCGATCGCGTTGTTCCGTTCAAATTAACTCCAGGTATTTTCGAATGCCAAGTCTGTAAGTGCAACTTTGAAACGTTCGGCTCTATAGAGCGTCATATGAACGTACATTTCAGGAACTATGTTTGCAAAGAATGCGGAACCGGTTATGTAACGAAATGCCGTTTAAAGGTACACTCGAAACAACATATTGGGGGGAGTTTCCCATGCGAAACGTGTAAAAAAGTATACTCGACGCCCGTAAAGTTAAAAAATCACATCGACGTGGTCCATAAAATGATCAAACGCTTCAAATGTGCTAAATGCGACGAGCGATTCACGGAATACTTTAGGCGGCAAAAACATATGGTAGAGGTACACGGTGTTGCCCCATtagaatataaatgtaatgtttgcGAAAAATCGTTTGATCGTAAATATATGTTGTCCATGCACATGAAAAGAGATCATTTGGAAGAGAGAGACTATCAATGCGAATTGTGCTCGTACACGTGTTTTACTAAAAACGAATTGAAAGTACATATGATAAAACACAACGGCGAAAGAATCTTCGAATGTACGGTATGCAAAAAATCATATGCAAGGAAAAAAACGCTCAGAGAACATATGCGAATTCATAACAATGATAGGCGATATGCATGCAAGTCGTGTGGTCAAGCATTTGTGCAGAATTGTAGTTTGAAAGGTCATATAAAAACTCATCACCCAGAACTCCTTGTTCcgtga
Protein Sequence: MNESDVSTKYGECRCCLTMGEHRDLMLEYEWNGSREVYFKIFLECFNLFLSTNSRKSTLICTTCILRLRDASSFKKMVLEAERNLLSYNLNRDNSIVQLQDLQKPIENEENEQLFEIKNEKFDNSEGSDIEQNEANSDTDGLEEDIVKITNKSYTDSIRDTFCKIKNNNRTEKLAYIYNASVILENSNVTPFKPKHQNGCFYCRMIFDDLSKLREHQKKHTKAELKRVLRSYGAENFVVYVDVTDLKCTICNEPVLNLNELKIHLIKEHKKKMQEFPDRVVPFKLTPGIFECQVCKCNFETFGSIERHMNVHFRNYVCKECGTGYVTKCRLKVHSKQHIGGSFPCETCKKVYSTPVKLKNHIDVVHKMIKRFKCAKCDERFTEYFRRQKHMVEVHGVAPLEYKCNVCEKSFDRKYMLSMHMKRDHLEERDYQCELCSYTCFTKNELKVHMIKHNGERIFECTVCKKSYARKKTLREHMRIHNNDRRYACKSCGQAFVQNCSLKGHIKTHHPELLVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01080935;
90% Identity: iTF_01506595; iTF_01507480;
80% Identity: -