Vtam021178.1
Basic Information
- Insect
- Vanessa tameamea
- Gene Symbol
- JARID2
- Assembly
- GCA_037043105.1
- Location
- CM073308.1:8329739-8334289[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.6e-17 1.4e-13 51.4 0.1 6 89 162 248 159 248 0.88
Sequence Information
- Coding Sequence
- ATGACTCATCACCCATGCACTACAGATACAGCTGAAGCCAAAGAAGAAAACGGTACTGCATCTGACAACAATCATCCTCTTCAAACAAAGACAAATGGAGCGGACGACGGAGCGGTTGCTGGTCCTTCAACTTCATTAGAAAATACCGAGCAATGTGATTCACCTACTCCTATATCtggaaaaaaacaaaatggcaaAAAGAAAACTAGGACAACTAgacgaaagaaaaaaattggTACTATTAAAAATTCAGATGCTAAGATATTAGAGGCACCTGTGTTTCATCCGAACGAAGAAGAATTTCGagATCCAATAGCatatttccaaaaaataatGCCAGAGGCGGCTAAATTTGGTTTGTGCAAAGTGATTGCCCCATCAGGTTTCAAACCAGAATGCACGATTACAGACTCGATTCGTTTTGTAGTAACAAATCAATATATTGCAAGACTATACAGCCGATGGGGTCCAGTAACACGTGAACTATGTGCCTTGCGCTCATTTTTAACGTCacaaaatattacgttttcCCACGCGCCcttaatggaGGGCTTAGAAGTAAATTTGCCTAAGTTATTGCATTTCGTACAACGACAAGGTGGACTCAAGGCGAATGTAAAAAGCCGCACATACGTAGATACGAGGAAGTGGAACAGACTGGCAGAGGAACTTAATTACACAAAAATGAACAATCCAGCAAAAAAACTGGATCAAATATATGTGAAATATCTACTACCGTACGACGCCCTCACTCAAAAGGAACGGCAAGATCTAGCGGAGCAAATGGATAAGAGATGGTCGAAAAGAAACGATAGATTGTTACAACGAGCGCAAAACCCTCTACATCGTCAAAGGAGATTGCTAGGGGAGTCTGATTCATCGGATGATGACGACTGTGAAGAAAACCAACAAATAGCCGCAGCGCTCAACGAAGCCGAAGAGTGTGTGATTCGTGGACGAGTCATGAatcttactaattttaaaaagATAGCCAAGACTGCGCTCCAAATATTTTTCCCATTGAAACCAACGACCTCCGAAGTTGAATCACAATACTGGAAGCTCGTGCTCCTCGGCAATGAGCACGTGTGCGTCAACACCGCGTCGATCGATACAGGCACTGAGGGTTATGggtttagtaaaaataaaaatgagccCTACGGCAAACATCCGTGGAATTTGAAGATGTTGAGTCAGAATAAAGGCAATGTTCTCCGTTCGCTCGGACCTGTACTAGGAGTGACGGTTCCAACCCTCCATGTCGGTATGATCTACTCGACGAGTTGCTGGCATCGCGATCCTCATGGTCTGCCATGGATGGAGTACATGCACACTGGACCTCAAAAAATTTGGTATGGTATACCAGATACGGAGAGTACCCGATTCCGGCGCGCCGTAGAGAGCCTTTGTCCAACTGCTTGCCAGAACAAGTCGATATGGCTTCCGTCAGACATTGCAATGATCCCGCCGACTTTGTTGCTAGAACGCAACGTGTCAATGTCACGCATAGTTCAGAAACCTGGGGAATATATCATAGTGTTCCCGAAAGCTTATTCGTGCTCTATCTGTACGGGCTACACGATCTCGGAGAGTGTTTACTTTGCAACTAATCCTTGGGTTAAAACTGTTAACTATGTTTTTCAAGAGTTGCGTCAGAGTTGTGAACCGACGATGTTCTCGCTAGAACAACTGCTGATCGCTATAGCTCGCGACGAGGGCGCCTCACTCACAATGCTGCAGCTGGTGCACGAGAATTTCTCCGCTATTCTCTCTGAGGAGCTTGAAAACCGACGTCAGCTTGAAAAGCATGGACTTAAGcctCGTGTTCTTCAATCCGAAAAACGAAACGCAGCCGGAGCGTGGAACGTGCACGAGAACGAATGTGAAGTTTGTCGTACAACGCTATATCTATCCCGGgtGAAAGGAGTATTTCGCAAGAAATATTCAGTCTGCCTACGACACGCTTTACAAGTTCTTGACAACAAGGTTAAGAAAATCGAAAGACGCGAGACGGAAACGTTTGAAATGGAATATTTCTTCACAACCTTCGAATTAAAAGAATTGATCTCATCAGTAATACAACGCTTAACAAAACAACCTGAAAAGAAACAACAAGacattatataa
- Protein Sequence
- MTHHPCTTDTAEAKEENGTASDNNHPLQTKTNGADDGAVAGPSTSLENTEQCDSPTPISGKKQNGKKKTRTTRRKKKIGTIKNSDAKILEAPVFHPNEEEFRDPIAYFQKIMPEAAKFGLCKVIAPSGFKPECTITDSIRFVVTNQYIARLYSRWGPVTRELCALRSFLTSQNITFSHAPLMEGLEVNLPKLLHFVQRQGGLKANVKSRTYVDTRKWNRLAEELNYTKMNNPAKKLDQIYVKYLLPYDALTQKERQDLAEQMDKRWSKRNDRLLQRAQNPLHRQRRLLGESDSSDDDDCEENQQIAAALNEAEECVIRGRVMNLTNFKKIAKTALQIFFPLKPTTSEVESQYWKLVLLGNEHVCVNTASIDTGTEGYGFSKNKNEPYGKHPWNLKMLSQNKGNVLRSLGPVLGVTVPTLHVGMIYSTSCWHRDPHGLPWMEYMHTGPQKIWYGIPDTESTRFRRAVESLCPTACQNKSIWLPSDIAMIPPTLLLERNVSMSRIVQKPGEYIIVFPKAYSCSICTGYTISESVYFATNPWVKTVNYVFQELRQSCEPTMFSLEQLLIAIARDEGASLTMLQLVHENFSAILSEELENRRQLEKHGLKPRVLQSEKRNAAGAWNVHENECEVCRTTLYLSRVKGVFRKKYSVCLRHALQVLDNKVKKIERRETETFEMEYFFTTFELKELISSVIQRLTKQPEKKQQDII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -