Vcar003609.1
Basic Information
- Insect
- Vanessa cardui
- Gene Symbol
- -
- Assembly
- GCA_905220365.1
- Location
- LR999934.1:14178274-14180306[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-09 2.5e-06 28.0 2.7 4 43 8 63 6 66 0.94 2 2 2.2 3.1e+03 -1.1 0.1 6 16 116 126 111 132 0.77
Sequence Information
- Coding Sequence
- ATGCCATTAAACGCTGCAGGGTGGACAACGGAAGAGGATGAAAAACTTATTGAATTAGTGCAACCACATGGACATTTGTATTGTTGGCTGGATCCATCAAGAAAGAACATCTTAACAAGAGAAAGAACCTGGCAAGAAATAGCAAAAGAATTATTTAAACCAGTTGAGGAATGTAAGAAACGATGGCGAGGTCTTCGAGATGGGTACACGAGAAATAAAAGGATGGGTGCTATACACAAATCCAAGGTGCCAATATTTGAAAAACTGCAATTTCTGGACAGCATGCCATTGGACACCATACCACTAGAAGTGGACTGTACGGGACAGGACAAAAATGACATGCTGGAAACGGAAGATCAAATACTCGAGGAACAGGTTATAACTGAACAGAATAATGTCATAACCGATAACCAGGAGTATTATGAAATTACCCTTGTCGATGGCCCGCACCAAGAGACTGATTTGAAACCACAGATTATAAAAATTGTGCCAAAGAAAATTAAACTCGAAAGCAGTCAATTAGAAGAAGCGCCTCCGAAAAAAATTGGTAGAAAGAATGCAGGAAGGAAAAAATCTGTACCGATGCCGAGGAATATACCACCGATTAAAATATTACCCAAACCTATAGTAATGAGCGAGCCTAGAATTATAAAATGCATAGACGATACAAAGACTTCGGAGCAGAGATCGCAAATCATAGACAAGTTAATCGAAAAAGTATTAAAAGAAAACACCAATGAGATCGATGTATTCTTCCGGAGTATGGCCGCTAGCGTTAAAAAATTACAACCAAATCTAATACCTAAGGTAAAAATGGAAGTATGCAATGTAATTGCTAAATACGAAATGCAAAGCTTCGACAAGAATGTTCAAAATCTTTAA
- Protein Sequence
- MPLNAAGWTTEEDEKLIELVQPHGHLYCWLDPSRKNILTRERTWQEIAKELFKPVEECKKRWRGLRDGYTRNKRMGAIHKSKVPIFEKLQFLDSMPLDTIPLEVDCTGQDKNDMLETEDQILEEQVITEQNNVITDNQEYYEITLVDGPHQETDLKPQIIKIVPKKIKLESSQLEEAPPKKIGRKNAGRKKSVPMPRNIPPIKILPKPIVMSEPRIIKCIDDTKTSEQRSQIIDKLIEKVLKENTNEIDVFFRSMAASVKKLQPNLIPKVKMEVCNVIAKYEMQSFDKNVQNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00824695;
- 90% Identity
- iTF_01078156;
- 80% Identity
- -