Vcar023894.1
Basic Information
- Insect
- Vanessa cardui
- Gene Symbol
- F54F2.9
- Assembly
- GCA_905220365.1
- Location
- LR999935.1:12736357-12743782[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-06 0.0036 17.9 0.0 2 35 293 329 292 334 0.85 2 2 1.1e-08 1.6e-05 25.4 0.0 2 43 374 420 373 422 0.85
Sequence Information
- Coding Sequence
- ATGCGTTGCGGAATTTTGTTATTTTTTACTTTATTATTAAGTGTTCGTGCATGGGATGATGATGATTTAGAGGTCTTCGACGTGGTTGAAGAAGTTAATCAGAATTTTTATGAATTATTGGGAGTTTTAAAGGATGCTTCACAATCTGAAATAAAATCAGCCTTCAAAAGGCTTACATTGAAGCTTCACCCGGATAAAAACGATGCTCCTGACGCAGATGTTCAGTTTAGGAACCTAGTATCTGTTCACAATATACTTAAAGATCCTGGGAAACGAGAGAAGTATAATGAGGTCCTTAAAAATGGTCTTCCGAACTGGCGTTCTGCAGTGTATTACTATAGACATGTGAGAAAGATGGGCTTGGCCGAGGGCTCTATAATACTCTTTGTAATCATAACGTTCGGACAGTATGCTGTTGGATGGGCTGCATATTTAGAAAAGAGGTTTACAGCTGAGCACATCTTAAATAGTCGAGGCAAGAAGTTTTTCAAAAAGACAGGCTTTGACACTGGCATAGCGGAAATATTAGAAAAGTTACCAAAACCTAGTATTAAAGATACTCTTCCATTTCAAATACCAAGAGCAATATGGTGGTCTATCACAGCAATTCCTCATGGTATAATGGAATTAAAGAGGAGGAGAATAGAAATGATTGAAGAGAAGAAGAGGAAAAAGAGAAAGGAAGAAGAAGATCGTATCCGGGCTGAGCGCGAAGCAGCGGCAGCTGAGGCCCGTGCGGAGGCCAGTAGTGCCGCGCGGAGGCGTAGGGCTTTCGTGCCGCCCGCCAGGGACTGCCTGCTGGACCCGGCCTCCGAGCCGGACGATGCAGCACCGGTGGCGGTACCCGTCAAGCCTTCCCCTCCAGTTATATCGGGAGGCCTCTGGACGGACGACGATTTGGTGGAGTTAGTCCGTCTAGTCAAGAAGTACCCGCCCGGCGCCGCCGAGCGATGGGAGAGGATAGCCGAGGCCATGTCTAGGAGTGTCCCCGAAGTTACCCACATGGCTGCGAAACTTAAGGAGAACTGCTACAAGTTACCTGGTCAAGATCAAGCTGATGAAACACCACCCGAACCACCCAAAAAGGTGAAGACGCGCAAGGCGGAGGAGACGAGCGGCGGCAACTGGTCGCAGACGCAGCAGCGCGCGCTGGAGGCGGCGCTGGCGCGAAGCCCTAAGGGCGCGCCCGGCGACCGCTGGCAGAAGATCGCCAACGCCGTGCCCGGCAAGACCAAGGAGGAGTGTATGCAGAGGTGCAAATATTTATCAGAAATGTTAAGGAAACAGAAACAGAAGGAAGAAGAAACACAGAAACAAAACGCGGAAACTCCCAACGAAAATGATAATCACAATGACGAAGAAGACTAA
- Protein Sequence
- MRCGILLFFTLLLSVRAWDDDDLEVFDVVEEVNQNFYELLGVLKDASQSEIKSAFKRLTLKLHPDKNDAPDADVQFRNLVSVHNILKDPGKREKYNEVLKNGLPNWRSAVYYYRHVRKMGLAEGSIILFVIITFGQYAVGWAAYLEKRFTAEHILNSRGKKFFKKTGFDTGIAEILEKLPKPSIKDTLPFQIPRAIWWSITAIPHGIMELKRRRIEMIEEKKRKKRKEEEDRIRAEREAAAAEARAEASSAARRRRAFVPPARDCLLDPASEPDDAAPVAVPVKPSPPVISGGLWTDDDLVELVRLVKKYPPGAAERWERIAEAMSRSVPEVTHMAAKLKENCYKLPGQDQADETPPEPPKKVKTRKAEETSGGNWSQTQQRALEAALARSPKGAPGDRWQKIANAVPGKTKEECMQRCKYLSEMLRKQKQKEEETQKQNAETPNENDNHNDEED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00801804;
- 90% Identity
- iTF_01079845;
- 80% Identity
- -