Vcar008435.1
Basic Information
- Insect
- Vanessa cardui
- Gene Symbol
- Myb
- Assembly
- GCA_905220365.1
- Location
- LR999947.1:4424957-4472993[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.9e-16 1e-12 48.5 0.5 1 45 71 115 71 116 0.97 2 3 6.1e-22 8.9e-19 67.9 2.0 1 46 122 168 122 168 0.98 3 3 7.8e-21 1.1e-17 64.3 0.6 1 44 174 217 174 219 0.96
Sequence Information
- Coding Sequence
- ATGCAATATCAAAGTAATGAAGAGGACGACTTGCAATATCGGATTTTTGGTGAATCCTTCAATTTTCCACTCGAGAATAATACCTCTGCCAGCCGGCGCAGAAAACGTAGCGGGTATGATTCAGAGTCGAGCGAGTATTCAGAGGACTCGGCGGCATACGAAGATGTGCCGGCTGCAACCAAAAGCTCTGGGCCGAGGAAGAATATCAATAGGGGGAGGTGGACGAAGGATGAGGACAAAGTCCTCAAGATGTACGTGAAGATGTACAACGAGAACTGGGAGCTGATAGCCGCTCAGTTCTCGGACAGGTCGGACGTCCAGTGCCAACAGAGGTGGACGAAGGTCGTCAACCCTGAACTAGTCAAAGGCCCTTGGACGAAAGAGGAGGACGAGAAAGTCATGGAGTTAGTAGCTAAGTACGGTCCTAAGAAATGGACACTGATCGCGAGACATCTCAAAGGCAGGATAGGGAAACAGTGCAGAGAACGCTGGCACAATCACCTCAACCCATCTATAAAAAAGACAGCTTGGACGGAACATGAGGACAGAATCATATACCAAGCTCACAAACAACTTGGCAACCAATGGGCCAAGATAGCAAAGTTACTGCCGGGCAGGACGGATAACGCAATAAAAAACCACTGGAATTCAACAATGCGACGCAAGTACGAGCCAGAACTGCTGGACAGTTTCGAGAACATTCGGAAGAAGCAACGCCTGAAGAGATACGATGTAAACGAAGAGCGTAGAGAGAAAGTCACTGTCGCTTATAATGACTCTAATTGGACGGATCCATTCAACGAGTCGACACAAAGCAACTCTTCCAACACAAGTCAACCTTCAAAACAGGTGTTACACTTCAGGCAGCTATTGAAGGACCAACTAAGCAATCTCCAGCACCAGACACCACCGAGGAAATCACCAGACAGGGGAGGTTTGGTCGCTGCTGATACAGTGGAAATTGTCGAATCACCTTTCAAGTTCGTAAACATAGACACGCTACCAATTAACTCTCCCATTAAAAACTTCCTAAGTCAAACGTCGACTGCTGATAGCAATGATCAAAACACAGTGACATATGCTGTTCAAGAGTCAGCAAAGGAGATAGTGGTACCATCGGTGTATTCCCCTAAGAAGTGCGACACAAACAGTCCGCCGCCCATACTGAGACGAGGGAAAATTAAGAAACAACAGACTCTTACACCCAATCCTAATACATGGGCCGAGACAATATCGAAAGCTCTAGAAGGTGCGACTCCAATCAAAGCTTTACCGTTCAGTCCCTCCCAGTTTCTGAACTCGCCGGCCGGATTATCGTTTCCTGCTTTTGATTCTACACCTTTGCGACATGCTACCAATAAGGAGCTGGGAGCCAGTCCGCTTCTCCACACCCCTACACCTGTGAACATCACTCCCGGAGGCAGTCAGCTCAAAAGCAATACACCGAAAACACCCACACCGTTTAAAATCGCGATGGCGGAGATAGGCAAGAAGTCAGGTCTCAAATACGAGCCCTCTAGTCCCGGTTTGCTCGTAGAGGATATCACTGAGATGATACAGAGAGAGGGGAATTCAGAAAGCACGGTCCAGTTGAACGATTCCATGTTATCTTCTACTGCGGATCAAGACGGAAATGTACAGGTGAACGATTCCGGCATAGGCAGCGGTCGGCGCGGCAAGGAGAACGTGCCGTCTCACAAGCGAGCGCGCAAGGCGCTTGCGCACAGCTGGGGCGCGACGAGCACGCCGCACGCGCACCGGGCGCTCGTGCCCGACGTGTCGTTCGGCGTCGAGACGCCGAGCAAAACATTGGCCGGTGACAGTTCAGTTCTCTTCTCTCCACCTTCGATAGTGAAACACTCCCTTCTAGAAGAGTCCACGAGTCTCCACAGCCTAATGAGTGCAGAGAACACACCGGAACCAATGAAATACGAAGAAATCGACATTGAATCGGCTATCACAGAAAAAACTAAGATTCGAAGGCTTTCGACGGAACCATTGGTCGTGAAGAAGTCAGCCGTGCGTTCTATTAAATTCGACCAAGACATACCGGAAGGCGCGAACGAAGAGAAACCTCTCATACTGACCGACAATAAATGGGAGACATTTGCGTGCGGTAAGACTCAGGATCAACTTGATTTAACAATGTTAGCTCATCAATATTTAAGGAAAACTGCGTTAAAACCACGTTCCCTCAATTTTTAA
- Protein Sequence
- MQYQSNEEDDLQYRIFGESFNFPLENNTSASRRRKRSGYDSESSEYSEDSAAYEDVPAATKSSGPRKNINRGRWTKDEDKVLKMYVKMYNENWELIAAQFSDRSDVQCQQRWTKVVNPELVKGPWTKEEDEKVMELVAKYGPKKWTLIARHLKGRIGKQCRERWHNHLNPSIKKTAWTEHEDRIIYQAHKQLGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYEPELLDSFENIRKKQRLKRYDVNEERREKVTVAYNDSNWTDPFNESTQSNSSNTSQPSKQVLHFRQLLKDQLSNLQHQTPPRKSPDRGGLVAADTVEIVESPFKFVNIDTLPINSPIKNFLSQTSTADSNDQNTVTYAVQESAKEIVVPSVYSPKKCDTNSPPPILRRGKIKKQQTLTPNPNTWAETISKALEGATPIKALPFSPSQFLNSPAGLSFPAFDSTPLRHATNKELGASPLLHTPTPVNITPGGSQLKSNTPKTPTPFKIAMAEIGKKSGLKYEPSSPGLLVEDITEMIQREGNSESTVQLNDSMLSSTADQDGNVQVNDSGIGSGRRGKENVPSHKRARKALAHSWGATSTPHAHRALVPDVSFGVETPSKTLAGDSSVLFSPPSIVKHSLLEESTSLHSLMSAENTPEPMKYEEIDIESAITEKTKIRRLSTEPLVVKKSAVRSIKFDQDIPEGANEEKPLILTDNKWETFACGKTQDQLDLTMLAHQYLRKTALKPRSLNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01508009; iTF_01506286; iTF_00723012; iTF_00159785; iTF_00824685; iTF_00985041; iTF_00942772; iTF_01079007; iTF_01079840;
- 90% Identity
- iTF_01079007;
- 80% Identity
- -