Vcar020948.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Vanessa cardui
Gene Symbol
ARID4B
Assembly
GCA_905220365.1
Location
LR999945.1:5080573-5099057[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.5e-30 1.3e-26 93.3 0.1 1 89 282 368 282 368 0.96

Sequence Information

Coding Sequence
ATGCAAGGTGATGATCCCCCATTTTTACCAGTGGGTACTGATGTGAGTGCCAAATATAAAGGAGCATTCTGTGAGGCCAAGATTAAGAAAGTTGTTCGTAACATTAAATGTAAGGTGACATTGAAAGCAGGTGGTATAACAACAGTGAATGATGATGTCATCAAGGGTACTTTAAGGGTGGGCAGCACGGTGGAGGTGAAACAGGACCCTAAAAAAGAAGCAATGGAAGCTGTTATTACAAAGATACAGGACTGTAGCCAGTACACTGTTGTGTTTGACGATGGCGACATAACTACATTACGACGTTCTGCATTATGCTTGAAGAGTGGGCGACATTTTAATGAAAGTGAAACATTAGATCAATTACCATTAACACATCCAGAGCATTTTTCAACACCAGTTATAGCTGGCAGAAGAGGACGTAGAGGAAGAGCGCAATCCGAAGAAAGTGAGGGCGAAGGAACCACTCGCCGTATGAAAGCAGACAGCGCAGAACGTGAGCCTCACGTCGGGCGCGTGGTGCTAGTAGAAGCGGCAAGCGGCGCGGAACGACGCAGGCCTCATCAGCCTGCATTCCCCGCGCTTGTGGTAGCACCCACTGCACAGATCAAAGTTAAAGAAGACTATCTCGTGAGATCCTTCAAAGATGGCAGATATTACACGGTCCCCAAGAAGGAGGCGCGTGAGTTCCGAAAGGGCTCAGCGCCATTGGAGTGGTCGGGCGTGGAGGCGGCGCTGCAGTACCTCAACCACGCCGTGCTGCCGCCGCACTGGGACCGCGACGCGCTCTTCAACGAGCCGCGCAATACCTCCGACGACAGTTCTGATGATGAGCCGCGTGAAGAAAAAGATCATTTTGTGGCTCAGCTGTACAAGTTTATGGACGATCGAGGCACTCCGCTCAATCGTAACCCAACCATCGCCAATAGAGACATCGATTTGTATCGTCTGTTTAGAGTTGTTCAAAAATTAGGTGGTTACAACAGGGTAACAAACCAGAATCAATGGAAGACAATAGCAGATAAGATGGGATTCCACCCTGTCACCACAAGTATCACCAATTTGTGTAAACAGGCTTACAAAAAGTTCCTGCACAGCTTCGAGGACTTCTACCGCAAGCTGGGCGTGACGCTGGTGGCGCACCCGCGCGGCGCGCGCACGCCGCCCGCCGGCCGCTCGCTCATCCGCGACCGCGACAAGCTGCCGCCCGCCGCCTCGCCCGCGCCCCCCGCCGCGCCCGCCACGCCCACGCCGCCCGCGCAGCGTTTAAAAGACAAAGATTCTGATAAGAGTGAAACAGAAAAAAGCGATAAGAGTGAGAAGGAAGAAAAAATAGAGAAGATAGAGAAAAAGGAGAAGCCGCGTGCCAGCGATGAGGATGACAGCGCTGACAACCAGCCCCTTATTATTACCACTCCAAAAGTTGACAAAGAAAAGGAGAAAGAAAAGGAAAAGGAAAAAGAAAAGGAGAAGGAGAAAGAAAAAGAAAAAGAGAAAGAAAAAGAAAAGGAAAAAGAAAGGGATAAAGACAAGAGTTCAACCACTAGTGAAGAAAAGGGAGTCATCAAGCCGCGCTCACAGTCCAAGACGCGTAGCTTGCCTCCTGTTAAGATGGAGTCCCATGAAAAGCGCACGCCTAAGAGGAAAACTATGTCTTCTAAATTAAGTGAAGGTTCAAGCAGCATCAGGCGACCATCTCGTCGGCCCAACGTCTCCACCGACAGTGACAGTTCTGGGCGAGCATCCAGGTGTGGACTAACGAAGAAAATGCAAAGCCGTAGAAGTCAAAGCGCCAACTCTGCGAGTAGCGGTAATACCATCGCATCGAACAGTAGCAAGAGACCTCGGAAGAGAAAGACCACAGAGCCATCGATGAATGAATCAACTCGTTCCGGAGGAGCCAATGTGGAAGCTCAAGTGGGCGATAAGTTGAAGGTGTACTACGGACCCACACAATCAGAGTCAAAGGTGACGTACGAGGCCAAGGTGATCGAGGTGTCGGCGGACGGTCTGCGCGTGCATTACACGGGCTGGAACACGCGCTACGACGAGTGGATCAAGCCCGAGCGCATCGCGCTCAACGTCACGCAGCACGAGGCGCGCAACAAGAAGATGACGAATCTAAATAGACGAGTCAGGAGCAAAAGAACAGAAGTGCTGATTTCAGAGTCATCAGCGCGATCCGACACCGACAGTGACTCCGATAGTGACACAAGTGTCAAAAGACCTCCTAAAAAGTCCGATGATAAATCAAATGTTAAAAATCCATCTAGATCAAAAGATCCAAAATCAAGTGACAGCAGCAGCTCGAGTAAACCAAGAAAAAGACCAGTAAGGACTGTATCCACACCGTTAGCCACTTCGCCAGCTAAGAAGCCACGCACAGCTGTCAGTGGACATCAGCACCAGGGCCGCGATTACGATCTGAATGAAATAAGATCGGAACTAAAAGGATTACATTCAGTTAAACAAGAAGCAGATGAAACTATTAAAACAGAAATTACGCAAAAAGACGCTATTATGAGTCCAGCACTTTCCACTGGCCAACCATCTGAACCCTCACGACCTGATAAGCAACCAGAGGATGTATATGAGTTTAAAGAGCCAGAACCGTTTGAGTTGGAACTGCACGATGAAAAAAAGAAAAGAACTCATCGTATATTCGATGACATTTCTCCAAGCAAGTATACGTCGACCCTGTCCAAATCATTAAGCGAAGAAATATCTGAAGACCCATTGAGACCACGACCATCCTCGTTTAGATCTCCATCTCTTTCGCCGTTCAGGGATTTTGGGTCAACTCGAGATGTACCAGGTAGACAAAGTCCTGAAGATGATTCTAAAGATGGTCTGTTCTCACTCGATGACGACTCCCTTCCGGGTGAAGGCAGTTCGGGGCCAATATTTGAAGGATTTACACCAGCTAAAAATCAAGAGACATACTCGAAAAAAAGTAAGGTTTCAAAACTTCGGCAGCTAATTGACGATTCACCGGATAGTCCAGCTGATGATGAACAATCGTCTGAAGATGAGCCGGAGGAAGTAATAAAAGAGGAGAAAAGGGAACCGAGTCCAATATTGCAAACTATAGAAAAAGAAAAATCTCCAGAACCAGTAATAGAAGAACCCAAAAATCCTGATTTGACTAAAGAAGTTAATGATGCAATAGCTATTCTCAAAGAAATACCTCCCTTGGAATCCATACCGGAACCTCCTTCCACTCCTCCGCCAAAGATAAAATCAGAACCTCCCATTGTAATTCCTCCTGTGGCTACCGTCATCACCAAAGATATTGAAGTAGAAAAGGATGAGCAAATCATTAAAGACGAGAAAGTAGTTCAGTGCGAAATAAATGAAAAAGCAATTCAAGAAAACATTATGGCTATACCACTTCCAAATGTAGAACCCAAAGACAAAGAGCCTCCAAAAATAAGAATCGAAAAGTTAGACCCTGCTCCTGATATGACTATATCAAAAATGGAGCCACCTTCAAGTCCGCTAATCGACACAGAGGAAGATAAATCAGAGCCGGACAGTCCCGCCCGAATCGATGTTTTACCTGAACCGCCACCTGCATTTCTGTTACAGTCAGAGGGGCCAAAAATTGCTGAAAAACTACTCAAAGCTATCAATAGTGCTAAGAGATTGTCTATGTCCCCTCCGCCCGTGGAAGATCGGCCGGAAACTCCAAAGAAAGATGTTAAGACTGATGATAAGTTGTCACCTACAACAGTGGAAGTAAAACGGCCTTCGAGTATACCGGAATTACTGAAGCCTTTGACTAAACTGGACCCCGTCCGACGCTATAGTCCAGCGGAAGCTATCGACTCCATATTTGGGGAACCTTCTAATTTAACGGATGTGAAACGAGATATATCAGACGTTAAGAAAGTGAAACCTAAAGAGCCGACGCCACCGAGGCTACAGAGTCCTTTAAATATATTAGAAAGGAGAAAAAGTGTAGCCGATTTGCCACTCAGTGCTCCCGGGAAAAACAAAGTTTTAAGTGATACCATACAAAAGTTATCCAGTCAAATCAATCAGTCTGTAGCGGCGGCCAGCATTCCCCTACCACCTTTCCCGCCGGAAGATCGCAGCGAATCGAGTGACTCTGATGATTCCGATAGAAGGTTGATAATCGACAAATTGGCCGTGGACGAGTGGGGCAGTGGGAGCGGTAACAGTGGCGGCAGCAGTAACGGTACAACCGTGGCGGTCATCGCTGGAAGGACTCAAACGGCAGCAGCGAGAGCGTTGCACGCCGGGAAATCTCCGGGAGAATGGAGCGCCGGGGAATCCCTGCTCATGCTCGAAGACGCTTGTAAGAATGAACGAAAACATGGCGCCAACGTTGTGGTAGCGGGCGGGGTGCGCGTGAGCACTGCGGAGGACGACGGCTGCGTGTCGCTGCTGCTGTGCGAGGAGACCATCCCGGGCTCGCCGGCGCCCGACGCCGAGCCCGCGCCGCCCGCGCGCGCGCACCACCTGCCCTTCGCCTGCGCGCCGCAGCACGCGCACTCGCACAACACGCATAACCATAAGACGGAGGAACGTCGGGGGTCAGCGGGAGCGGCAGAGGCGGGGGAGGGGCGCGCGGGGGGCGCGGGCGCGGCGGGCGGCGCGGGCGACGACGACTGGTCGCGGCGACGCGCGCTGCTCGACAACACGCCGCCCACCACACCCGACAGCAGCCTCGACCTCTCGCCGCATAGAGAGAGGCGAATATCAGAAAGAGATAGTCCTTCGGATAGAAAGGAAGATGAAGAAGACAATCACGCACAAGATGTTTGTGCCCTCGATATCGACAAGCCTCATGGCAGCGCCCGCTCGCGCAAGGCGTCGGAGTCGTCGGGCGCGGGACGCACGCGCGCGCGCCGCGCCCGCCGCGACACCGACGAGCCGCACGCGCCGCACGCACTCAAGTACAACTTCTACGTCGACCTCGATCCTTCCTGGGATTGTCAAACTCGTATAAATGTGCTGACGTCACGGCTGGCTGATCTACGCAAAGCATACCACTCTGTGAAGGCTGAACTGGCTGCCATAGATCGCCGACGTAAAAAACTGCGACGCAAGGAACGAGAAGCTATCAAAGCAGCCAAAGCTGCTTGCTCGTGA
Protein Sequence
MQGDDPPFLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGITTVNDDVIKGTLRVGSTVEVKQDPKKEAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSEESEGEGTTRRMKADSAEREPHVGRVVLVEAASGAERRRPHQPAFPALVVAPTAQIKVKEDYLVRSFKDGRYYTVPKKEAREFRKGSAPLEWSGVEAALQYLNHAVLPPHWDRDALFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANRDIDLYRLFRVVQKLGGYNRVTNQNQWKTIADKMGFHPVTTSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDKLPPAASPAPPAAPATPTPPAQRLKDKDSDKSETEKSDKSEKEEKIEKIEKKEKPRASDEDDSADNQPLIITTPKVDKEKEKEKEKEKEKEKEKEKEKEKEKEKEKERDKDKSSTTSEEKGVIKPRSQSKTRSLPPVKMESHEKRTPKRKTMSSKLSEGSSSIRRPSRRPNVSTDSDSSGRASRCGLTKKMQSRRSQSANSASSGNTIASNSSKRPRKRKTTEPSMNESTRSGGANVEAQVGDKLKVYYGPTQSESKVTYEAKVIEVSADGLRVHYTGWNTRYDEWIKPERIALNVTQHEARNKKMTNLNRRVRSKRTEVLISESSARSDTDSDSDSDTSVKRPPKKSDDKSNVKNPSRSKDPKSSDSSSSSKPRKRPVRTVSTPLATSPAKKPRTAVSGHQHQGRDYDLNEIRSELKGLHSVKQEADETIKTEITQKDAIMSPALSTGQPSEPSRPDKQPEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPSKYTSTLSKSLSEEISEDPLRPRPSSFRSPSLSPFRDFGSTRDVPGRQSPEDDSKDGLFSLDDDSLPGEGSSGPIFEGFTPAKNQETYSKKSKVSKLRQLIDDSPDSPADDEQSSEDEPEEVIKEEKREPSPILQTIEKEKSPEPVIEEPKNPDLTKEVNDAIAILKEIPPLESIPEPPSTPPPKIKSEPPIVIPPVATVITKDIEVEKDEQIIKDEKVVQCEINEKAIQENIMAIPLPNVEPKDKEPPKIRIEKLDPAPDMTISKMEPPSSPLIDTEEDKSEPDSPARIDVLPEPPPAFLLQSEGPKIAEKLLKAINSAKRLSMSPPPVEDRPETPKKDVKTDDKLSPTTVEVKRPSSIPELLKPLTKLDPVRRYSPAEAIDSIFGEPSNLTDVKRDISDVKKVKPKEPTPPRLQSPLNILERRKSVADLPLSAPGKNKVLSDTIQKLSSQINQSVAAASIPLPPFPPEDRSESSDSDDSDRRLIIDKLAVDEWGSGSGNSGGSSNGTTVAVIAGRTQTAAARALHAGKSPGEWSAGESLLMLEDACKNERKHGANVVVAGGVRVSTAEDDGCVSLLLCEETIPGSPAPDAEPAPPARAHHLPFACAPQHAHSHNTHNHKTEERRGSAGAAEAGEGRAGGAGAAGGAGDDDWSRRRALLDNTPPTTPDSSLDLSPHRERRISERDSPSDRKEDEEDNHAQDVCALDIDKPHGSARSRKASESSGAGRTRARRARRDTDEPHAPHALKYNFYVDLDPSWDCQTRINVLTSRLADLRKAYHSVKAELAAIDRRRKKLRRKEREAIKAAKAACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01507844;
90% Identity
iTF_01507844;
80% Identity
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