Vcar021355.1
Basic Information
- Insect
- Vanessa cardui
- Gene Symbol
- -
- Assembly
- GCA_905220365.1
- Location
- LR999939.1:13903754-13911164[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0001 0.11 13.0 0.4 27 60 270 303 267 305 0.91 2 2 7.4e-05 0.084 13.4 0.9 27 60 758 791 755 793 0.91
Sequence Information
- Coding Sequence
- ATGAGTGCTACTAACAATATTAATTCTCCAGGAGGGTGTCACTCCCTCTCCGACCCGCTTCACGGGTCGGACAGTCCCGTATCGAAATCTGGAGGGGACAAAGTCGCACTTGAATCTTTTAACGACGACCACAATGCAACCAAAATGGACATCGAAACGGAGAGAGAAGGCGTAGTATTAAGTAGAATAAGTAGTCGTAATAATAGTATTAGTAAATCTGTAAATAAGGAAGATCCTGGCCTACTTAAAGGCCTCGTAGTCCGGCTGGAGCGGCTCCCAGAGTCAGACTCGTCGGTCTGCAGCACTGAGACAAACAAAAGAAGGAGGAAGGGAGAGAAGCGGTCCCACGCAATGGACAGTCCCTCGGGCTCCGATAGCGACGCGACAACTCAGCGCAGCGACTCGGAGTCCACCATCAGTAGATGGCTCAAACCAGCCAACAAAAGGGGGCGTGGGCGTCCAGCTTCTCATGGATTGTACGTTGGGCTCGGTAGGTCGATGGAGGAGCTCAACTCCCAAAAAAGATCAGACCAGCGGTTCGATCTGGAGGACTCACTGGCTGCTTACAATGAAGCGGCCCGGGTGGCCATGGAAGAGAGGGCAGCCCTTAGTAGAAAACGTAACTCTCAGTCACCTAGTGGCACGGAAGATGTGACGAAGACGTCGGCCGCATTGGACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGCCCTAACCATGACGGAGGACGTGGCGCGTCTCGAAGCGGCCAATGCGCAGCTCTCAGGCCAGTTGGCAGAGCTGCGCCGGGAAGTGGCCGAGATGAGAAAAACACCGGTAACGACAGACGCTTCACACTTTAAAGAAATCATGGAGGAGGCGCTACGCTCCAACCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGGCGCGGACCGCTGCTGCCTCCGATAGGCCGACAACACAATCGCAGTCGTCCGTCGCTCCAGCCACGGTTAGTGATAGGAGCCAAGCAGCCAAACCGGCAGCCAAACCGAAGGGGAAAAAGAAAAGGAAACCCAGCATGGCTGCCCAAGAAGCAGCAGCAGCTGTAGGTAACAAAACTGCCCCACCATTACCATCGAAGCCGAGCAGTTCCGGCACGTCATGGGCGGCCGTTGTTCGGAAACAGCCGAACAAGCCGCCCAAAAACCCAAAGGCAAAAACGCAAAAGGTGGAAAAGCAAAAGGCCCCTAAGCGAAGGAAGCTTCGCCCTCCGCGCACCGCGGTTATCACCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGCAGTATGCGGACGGTGGAATCACTCGATTCCCCACACAAGGAAGATACAAATGCGCGGCGGAAGGGCGAAAAGCGGACACACGCTGAGGATAGCTGCTCTGGCTCCGAAAGTGACGTGAGCGTGCAGCTGAGTGAAAACTCGGACTCAGCGAGGTGGCTTAAACCCGCAAACAAGAGAGGGCGAGGCCGGCCGCCCACTCACGGTAAATACGTGGGCTTGGGCAAGTCTCAAGCGGAACTCCGTGCGGCGAAAACGAAGGCCAGAGAGGACCGCTTCGAGACCGAAGACGCCCTGGCCGCTTACACTGAAGCGGCAAAAGTGAATTTAGACGAGAGAGCGGCTCGTAATCGGAGTCGTCACATGGACGTGACCAATGAGGATGCTCAAAAGACGTCTGCTGCACTGGATAATACAGTAAAAGAGGCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCGGAACTTAGAGCCCTGACCATGTCGGAGGAAGTGGCCCGGCTGGAAGCTGCCAACGCAAAGCTTTCCGGCCAGTTGGCTGAACTGCGAAGGGAAGTGGCCGACATGCGTAGGAAGCCGCCACAACCGAGCGAGGATAACTTAAAACGCATCATGGAGGAAGCGTTGAGGAGCAGCCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCACCACCCGTGCCGTCCGCCGCCAAGGCCACGGAAAAGGGTAACGCGAAGACGGCCTCGACTTCTTCGACGAAGAAGAAGTCGAAACGCCCCAGCATGGCTGCCCAGGAGGCGGCAGCGGCTGTGGCGATGAAGACTGCCCCCGCGCCGACTCCGAAGCCGGGCAGCTCTTCTGTGTCTTGGGCGACTGTTGTTCGGCAGCCGCCGAACCCGAAACCGCCCAAGAAGGCGACGGCTACAAAACCGGCGAAGACGGGGACGCCGAAGACCGTCCCAACGGCGAAGGATAAGAAGAGGGAACTCGCCTCCTCGTGGCGCACCCTGGGCAACGGGGCCGGCGATCTTTTGTCGTCGGCAACGGCTAAGACTGACGGGGAGGGTATGTCACGGACCGCTCCTGGTACTTCTCTGATTAGCAGAGTGGACTGTGTGAGCGGCTTCGTGGCAAAGGGGAGTGTTTGTGACGTTTGGTGTTGTTGTTTTGTCATTCGTTGCTTGTAA
- Protein Sequence
- MSATNNINSPGGCHSLSDPLHGSDSPVSKSGGDKVALESFNDDHNATKMDIETEREGVVLSRISSRNNSISKSVNKEDPGLLKGLVVRLERLPESDSSVCSTETNKRRRKGEKRSHAMDSPSGSDSDATTQRSDSESTISRWLKPANKRGRGRPASHGLYVGLGRSMEELNSQKRSDQRFDLEDSLAAYNEAARVAMEERAALSRKRNSQSPSGTEDVTKTSAALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALTMTEDVARLEAANAQLSGQLAELRREVAEMRKTPVTTDASHFKEIMEEALRSNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARTAAASDRPTTQSQSSVAPATVSDRSQAAKPAAKPKGKKKRKPSMAAQEAAAAVGNKTAPPLPSKPSSSGTSWAAVVRKQPNKPPKNPKAKTQKVEKQKAPKRRKLRPPRTAVITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSMRTVESLDSPHKEDTNARRKGEKRTHAEDSCSGSESDVSVQLSENSDSARWLKPANKRGRGRPPTHGKYVGLGKSQAELRAAKTKAREDRFETEDALAAYTEAAKVNLDERAARNRSRHMDVTNEDAQKTSAALDNTVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRALTMSEEVARLEAANAKLSGQLAELRREVADMRRKPPQPSEDNLKRIMEEALRSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPVPSAAKATEKGNAKTASTSSTKKKSKRPSMAAQEAAAAVAMKTAPAPTPKPGSSSVSWATVVRQPPNPKPPKKATATKPAKTGTPKTVPTAKDKKRELASSWRTLGNGAGDLLSSATAKTDGEGMSRTAPGTSLISRVDCVSGFVAKGSVCDVWCCCFVIRCL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -