Vcar021562.1
Basic Information
- Insect
- Vanessa cardui
- Gene Symbol
- -
- Assembly
- GCA_905220365.1
- Location
- LR999939.1:13590061-13590705[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.5e-09 6.3e-06 26.6 3.6 2 45 154 197 153 199 0.95
Sequence Information
- Coding Sequence
- ATGGCTCTCTGGACGCCGTACGCTGATGACGCAGCATTAGATCTCACAGTGAAGTGTAAATCGGAAAGCATATCACCGGTACCAACATATACGGAGTTTCCATATCCGTGTACGAACACAGTGCAACACAGTGTAGAACATTACCCCTACATCGGCTATGTCCAGCCGATGTACGTGCCCGTCGCTGAAGCCTCGCCAGCGTCTTCGTGTTCTGGATACATCCCGCAATCAATGAGCCCCCCAATGAGAACGGGCATGATATCGCCGCCAGACTCCCCCGTATCAGTGAACGAGAGGAAGCGTCCTAGTTATATGATGGACGTCGACTCATTATCTGATGATCCAGATTTTCAAGCCTTCGAAAGGGATGCGCTCAGAGCAATGGCTGAAAAGAACGGAGGAGCTTTACTCGGTAACAATCCGAGAATGCGTCGTGCCGTTCAAACCAGTCAAAACGCCGACGATTCCTATAGAAAACAAAGGGAAAGGAATAATTTTGCTGCGAAGCAGAGCCGCGATAGGAGGAAGCTGAGAGAGATCCATCTCGCTTTGAAAGTAACATATCTGAAGAATGAATTGTCCAAGCTCAAAGGCCTGCTGTCGACAAAAACATGCATGAGGTGTCACCAGACGTGCCTCTGCTAG
- Protein Sequence
- MALWTPYADDAALDLTVKCKSESISPVPTYTEFPYPCTNTVQHSVEHYPYIGYVQPMYVPVAEASPASSCSGYIPQSMSPPMRTGMISPPDSPVSVNERKRPSYMMDVDSLSDDPDFQAFERDALRAMAEKNGGALLGNNPRMRRAVQTSQNADDSYRKQRERNNFAAKQSRDRRKLREIHLALKVTYLKNELSKLKGLLSTKTCMRCHQTCLC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00461313;
- 90% Identity
- iTF_01077943; iTF_01507822; iTF_01079637; iTF_01506101; iTF_00843258;
- 80% Identity
- -