Vcar023456.1
Basic Information
- Insect
- Vanessa cardui
- Gene Symbol
- ATFC
- Assembly
- GCA_905220365.1
- Location
- LR999941.1:6784058-6805746[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-09 1.8e-06 28.4 9.9 2 63 275 336 274 338 0.95
Sequence Information
- Coding Sequence
- ATGAGTGCGAGCCAATGGAACTGGTCGCTGGCTTCGGCCGACGGCCTTTTAACTGAAAATGAATGCTCTATGCTGCTCGAAGTTGATCTTTTTGACACCGATGGAGATCTACTAAAGAATTTTCCGGGCGCTGCACCGAAGATCGAATCTGGCAAATTGCTTCAAGATGACATATCAAACACAATGTACCCGCCATCCCCGCCAGAGATCAAGCCCAGCCGAGCTGAGCTTGCGACTGATCTTCTGCAGCAGCTGGAAAATCAATGCAAACAAGAAAACATATTTTCAAACTGGTTGGAAGAAAAAGTGGAGCTTCCCATCTTCGAGAACATCTCCCAAGTGCCCGAGCGTGTAGAGGTACCGCAAGTAGCGCTGCCCCTACCCACGTACGCGCCACAGACGGTACCGCAGCCGACCGAGGAGCTACTGCGAGAGTTCGAAACGGTATACGGCGCCGTCGAGTTGACCCATCTTACACCGCCGCAGAGCCCGCCCGGCCCCGCCACTCAACTCCTGCTTAGCTACGCGCAGCAAGCACAGTGCGCCTCCATCGCGCCCGCCCTGCACCCCGCTCCGGTGGTGCCGGAGCAGTGGCCCGTCTCCCCCGCGCCGGTTGTGCTGTCGGAATACGACTGCGACTCCCAGCTCGAGGAGCTAGTTCGCCACCGCGCCGCTCAGCTAGCGTCCCCGCAGCCGTCCGCTCGCAGCGCGTCTACCTCGCCCCGCTCCTCCCCGCGCTCGTCGCCGCCGTCGTCGCCGCGCTCGTCCTCCACCGACGAGGAGTGGTGCGCGTCTCGCCCCAAGCCGTACTCGCGTAACGTCGACGATCGCCGTTCGCGCAAGAAGGAGCAGAACAAGAACGCAGCCACACGCTACCGCCAGAAGAAGAAGGCGGAAGTCGAAGTGTTGCTCAACGAGGAACAGGCGCTGCGCAATCGCCACGTCGACCTCGGAGAGAAGTGTTCGGACCTGCAGCGAGAGATTCGGTATCTCAAGGGGCTCATGCGCGATCTGTTCAAGGCGAAGGGTCTCATAAAATAA
- Protein Sequence
- MSASQWNWSLASADGLLTENECSMLLEVDLFDTDGDLLKNFPGAAPKIESGKLLQDDISNTMYPPSPPEIKPSRAELATDLLQQLENQCKQENIFSNWLEEKVELPIFENISQVPERVEVPQVALPLPTYAPQTVPQPTEELLREFETVYGAVELTHLTPPQSPPGPATQLLLSYAQQAQCASIAPALHPAPVVPEQWPVSPAPVVLSEYDCDSQLEELVRHRAAQLASPQPSARSASTSPRSSPRSSPPSSPRSSSTDEEWCASRPKPYSRNVDDRRSRKKEQNKNAATRYRQKKKAEVEVLLNEEQALRNRHVDLGEKCSDLQREIRYLKGLMRDLFKAKGLIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00695224;
- 90% Identity
- iTF_01080488; iTF_01507821; iTF_01079632; iTF_01506100; iTF_01077942;
- 80% Identity
- -