Vcar021450.1
Basic Information
- Insect
- Vanessa cardui
- Gene Symbol
- -
- Assembly
- GCA_905220365.1
- Location
- LR999939.1:13604685-13605263[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-09 4e-06 27.3 5.2 2 47 132 177 131 181 0.92
Sequence Information
- Coding Sequence
- ATGGCTCTGTGGACCCCCTACGCGGAAAAAGCCTTGGACTTAACTAAAAATGTCAAAAAGGAAGTCTCCCCAGACAGGACTTTAAGACCTAAGGCTCCCGAATACAGATATTCATCAGTGTCGCCGAGCTTGGAACATGAAAATAGGTGTTACAATTACTACGAGTACAGCATCCCACCATCCCAGATATCTCCCATCGAGAACTGGAACTTCAGAAAGGTGCCGTCACCACCGCAATCAGAGGAGTCCTTCGAAGTCGATTCGCTGTCTGATGATGTTGAGTATCAAGCGTTTGAGCGAGATGCCTTAAGAGCGATGGCGGAGAAGAACGGGGGTTGCTTACTCGGAAACAATCCGAGGATGAGGCGAGCGGTTCAGACGAGCCAAGAAGCTGACGACTCATATAGGAAACAGAGGGAAAGGAATAATTACGCGGCAAAACAGAGCAGAGATAGGCGGAAGTTGAGGGAAGTGCGACTCGCGTTTCAAGTGACGTTTCTGAAGAAAAAAATCGCGGACTTAAGGACCAAGCTCGGGGAACGAGTGTGTCTGCGCTGTCAACAGCAGTGTCGGTGTTAA
- Protein Sequence
- MALWTPYAEKALDLTKNVKKEVSPDRTLRPKAPEYRYSSVSPSLEHENRCYNYYEYSIPPSQISPIENWNFRKVPSPPQSEESFEVDSLSDDVEYQAFERDALRAMAEKNGGCLLGNNPRMRRAVQTSQEADDSYRKQRERNNYAAKQSRDRRKLREVRLAFQVTFLKKKIADLRTKLGERVCLRCQQQCRC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01077944;
- 90% Identity
- iTF_01077944;
- 80% Identity
- -