Vcar005335.1
Basic Information
- Insect
- Vanessa cardui
- Gene Symbol
- slbo
- Assembly
- GCA_905220365.1
- Location
- LR999949.1:1417726-1444798[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-12 2.3e-09 37.6 10.2 3 62 213 272 212 275 0.94
Sequence Information
- Coding Sequence
- ATGTGCCCTAGTGAACCTCAGTGCCCTGAAGTGGAGACTCGCAGTGCGACCGCTGGGCCTATCGGCCCCGGCGGCATGGAATCCCCCCAGATGTACGACGCAGCCGCGGCTCCGCCACCGCCGCCGCAGCCAGACCTCAAAAAGGCGGCAGAGGATAAAAGGACACCTTTCCCACCCCCGGACTTGGACGAGCTCAATGGACAGGAGATCAGCTTGGATTTACAACACCTCATCGAGGACCAGTTCCGAGGGGAGGAGACGATGGCTCTCTTCCAGGAAATACTCCCCGGAGGACGGTCGCCACAGCAGAGGCCGTTCGCGCGAACGACCCTCGCGTATATGCCCCAGCCCGTCCACTCCGGAGCATCGTACGCGAATCCGGTGCCTGCCAACTCTCACGAACAAGCGCCCCCGATAAAGGAGGAGCCTCCCGAACCGCATGATTTCAGGCGAGCAGTGACATGTGCGCAATACACAGGCCAGTACAACGCACAGCCGCCAGTCGGAGTGAGTGGCCCCTATGGAGGCGGTTTCACACCGCTGCCTCCCCTGGGAGCTCCTCTGCTCCCGCCTCTGTTGAAACACAAGCAGCCCCCGTCGAGACGATCGTCCGGCAAAGTGATAGACAAAGGCACGGACGAGTACCGGAGGAGGAGGGAGCGGAACAACATAGCCGTTCGTAAATCACGCGAAAAGGCAAAAGTACGTTCGAGGGAAGTCGAGGAGAAGGTAAAGACGTTACTCCGTGAGAAGGAGGCATTACTAAAGAGGCTGGAGGCGGTCACGGGGGAGTTGAGCCTCCACAAGCAGATGTACGTTCACCTGATCAACTTGAACCACCCGGAGATCACTGAACTGTGCCGGTCGATGCTGCAGCTAGGAGCTCCTCACTCGTCGGATCACACGCTCTGA
- Protein Sequence
- MCPSEPQCPEVETRSATAGPIGPGGMESPQMYDAAAAPPPPPQPDLKKAAEDKRTPFPPPDLDELNGQEISLDLQHLIEDQFRGEETMALFQEILPGGRSPQQRPFARTTLAYMPQPVHSGASYANPVPANSHEQAPPIKEEPPEPHDFRRAVTCAQYTGQYNAQPPVGVSGPYGGGFTPLPPLGAPLLPPLLKHKQPPSRRSSGKVIDKGTDEYRRRRERNNIAVRKSREKAKVRSREVEEKVKTLLREKEALLKRLEAVTGELSLHKQMYVHLINLNHPEITELCRSMLQLGAPHSSDHTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00407323;
- 90% Identity
- iTF_01141400;
- 80% Identity
- iTF_01507818; iTF_01506097;