Vcar021976.1
Basic Information
- Insect
- Vanessa cardui
- Gene Symbol
- HLF
- Assembly
- GCA_905220365.1
- Location
- LR999953.1:5997813-6009856[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-14 3.5e-11 43.5 11.1 1 64 95 158 95 159 0.97
Sequence Information
- Coding Sequence
- ATGGAACACACTAACTTGCTCTACGACCTCGACCCGGTGTGTGGATCGCAACAAAGCGCTTTAGCAGCGCTTCGACTGTTGAGGAGTTACAATCAGTTCGTCGTACCACCTGATGGACGCGGCGTGGTACCTCTGTTGGCGACCATACCACCGCCGTGTTTGCCATCATACTGCCAGCATCTACCGTTATGCTCACCACTATCAACATCAAATGTGTCCTCGACGTTATGTGATATGGAATCACGGAGACGAGGTGAAAAGAGGCCGATACCAGCTGAACTCAAGGACGAGAAGTATTTCGAGAGGCGCAGACGAAACAACCAAGCCGCTAAGAAGTCCAGGGATGCCAGACGGATGAGAGAGGATCAGATCGCGTGGCGAGCTTGCTTACTCGAACAAGAGAACGCATCATTAAGGGCTCATATAAATGCACTAAGACAGGAAACGATAACTCTGCGCGCGCTACTCGCGGCCAGGGATGAAACGACGATGCCTTCGTCCACTACCAAAGATTAA
- Protein Sequence
- MEHTNLLYDLDPVCGSQQSALAALRLLRSYNQFVVPPDGRGVVPLLATIPPPCLPSYCQHLPLCSPLSTSNVSSTLCDMESRRRGEKRPIPAELKDEKYFERRRRNNQAAKKSRDARRMREDQIAWRACLLEQENASLRAHINALRQETITLRALLAARDETTMPSSTTKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00954155;
- 90% Identity
- iTF_01079626;
- 80% Identity
- -