Vcar005143.1
Basic Information
- Insect
- Vanessa cardui
- Gene Symbol
- -
- Assembly
- GCA_905220365.1
- Location
- LR999949.1:6340000-6342470[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-15 5.8e-12 46.0 7.1 2 64 26 88 25 89 0.95
Sequence Information
- Coding Sequence
- ATGATATTAGACGATTTTTGGGATATGCCACCACAAAAACGCGGGAGACGGGGCGTTAGTGATGCTGATGATGAGGATGACGACTACAGGCGACGCCGAGACCGAAATAACGAGGCAGTCAAAAAGAGCAGATACAAGTCTAAGCAGCGGACTCAGGAAACATTTACACGGGTAAATAAACTGAAGGCTGAAAACCAGATGCTAGAAGAGAAAGTGAAAACATTAACAAAAGATCTCCAATTTCTTAAGGAATTATTTATGGAATACGCTTCCAATTCACAAGATCCCAAATTTGAGGGTATCGATCTAGAGAAACTCCTAGAAGATGTACAAGACGACAAGAAGGACGCAAATAGCAGTAAATAA
- Protein Sequence
- MILDDFWDMPPQKRGRRGVSDADDEDDDYRRRRDRNNEAVKKSRYKSKQRTQETFTRVNKLKAENQMLEEKVKTLTKDLQFLKELFMEYASNSQDPKFEGIDLEKLLEDVQDDKKDANSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00256597;
- 90% Identity
- iTF_00953273;
- 80% Identity
- iTF_01078810;