Vcar021331.1
Basic Information
- Insect
- Vanessa cardui
- Gene Symbol
- Atf3
- Assembly
- GCA_905220365.1
- Location
- LR999939.1:6271948-6321543[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-15 3.1e-12 46.8 12.5 2 63 176 237 175 239 0.96
Sequence Information
- Coding Sequence
- ATGAATTCGTCGAGCATAAGCTCAGCTGTGCCGACGATTAAATGTGAGGACACTTCCCCGTCGCCGACGGCTGCGGTGGGTACGGACGGGGAGTCGGGGGCGTATCTAAGCGTGAACGTGAACCTCAGCGCCGCCATGATGAACCTCCTCGCGGCAGAGGGCGCCGGCAACACCACGCTCCGGACACCAGAGATTGTTAACGATGTCATCACCATGACGAATCCTCTAGATCAGTACAATTACGATAAAAATTCTAGTTTCAAGAATGCGATCTGTCAAGACTCTAATTCTTCAATGTCTAATAGCTCCTCTGCTACTTCACCAGCATCAGGCACTCCGCCCAGCATACAAAAGACGTGTTCGGAATTAATAAAGGCTGGTTTAAAGTTATCCATAGAGTCGAAGAGGAAGATGTCAGGCAGCGACACAGACGGAGGATTCAAGCGGCTTAAGAAGGAGGAAAGCGATGATGACTATGACAGTAGTCATACGCAAGCTCCTAAAAACGAGTTAACACCTGAAGATGAAGAGCGAAGACGACGCAGAAGAGAAAGAAATAAAATAGCAGCTACGAAGTGCAGGATGAAGAAAAGGGAAAGAACTGTGAACTTGGTGAACGAAAGTGAAGTACTCGAAACGCAAAATATAGACCTAAAGGCGCAATTGAAGGATCTCGAAGTTCAGAAACGGCAGCTGATTGACATGCTATCACTGCACGCGGCTTCGTGCGTCAAGAACAATTCGAACGCGAGGACGTCGCCTTCAACACCCTACAACATGATTCGAACATTTGAATCGCCGACAACATTCCCAGTCTCCTTCGACACCCACTCGCCCTACATACGACCAGAGTCAGCGAACATACTCGCTTCGAGCTACACGTGTGCCACACCCATCAACGGAGACTCCATAGACACCATATCGTCACTCGAAACGACGTACTTGACTCCTCAGACAATAGACGTCGAATACAACAGACCGGACAGCGTTCTCAGTCTCCCTCCAAACTCTGACGCAGGCTATATAACCACTGATGGTTACTTGCCGAAAACGACCACGATTTTAGGTCCCATGGAGCCAGAGGCGGAATATTACGAATCTGAGTTAACCTATGTCAGTCCTCAACAATGCCATAGTTACCCGAGCAACATTCAAGACAGCCAATCAAAACTCAGCAACAATCTAAACGACGGCTGTCTCGTTTAG
- Protein Sequence
- MNSSSISSAVPTIKCEDTSPSPTAAVGTDGESGAYLSVNVNLSAAMMNLLAAEGAGNTTLRTPEIVNDVITMTNPLDQYNYDKNSSFKNAICQDSNSSMSNSSSATSPASGTPPSIQKTCSELIKAGLKLSIESKRKMSGSDTDGGFKRLKKEESDDDYDSSHTQAPKNELTPEDEERRRRRRERNKIAATKCRMKKRERTVNLVNESEVLETQNIDLKAQLKDLEVQKRQLIDMLSLHAASCVKNNSNARTSPSTPYNMIRTFESPTTFPVSFDTHSPYIRPESANILASSYTCATPINGDSIDTISSLETTYLTPQTIDVEYNRPDSVLSLPPNSDAGYITTDGYLPKTTTILGPMEPEAEYYESELTYVSPQQCHSYPSNIQDSQSKLSNNLNDGCLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00642090;
- 90% Identity
- iTF_00843248;
- 80% Identity
- -